iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088852

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03040124

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000006937.2	ENSOGAT00000006943.2	ENSOGAP00000006211.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-22	77.4	82	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af........sdtllvsGsdDgtikvWDlrtgvll 36
           gHt ++t++  f         + l++++s D+t+ vWD  +g+++
   Q: 82   GHTQKITAIiTFtslesceeKNQLILTASADKTVVVWDSNSGRQV 126
           8*******7359999998764488**************9999887 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVVVWN AETGEQLLEL NGHTQKITAI ITFTSLESCE EKNQLILTAS ADKTVVVWDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGCGAT GGCTGATCGG GGGAGGCCGA GAACCACAGG GACTGGCCGA GGTAAACCCG 60
GGAAGACCCT CCCTGCGCCC GCCGAGACCG AGCTCGCCCC ACTGTGGCTC AGTTCTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	89.59	0.00e+00	855.00
IUUC-Apl-004087	Anas platyrhynchos	74.29	0.00e+00	641.00
IUUC-Aca-005359	Anolis carolinensis	71.62	0.00e+00	687.00
IUUC-Ame-010669	Astyanax mexicanus	41.93	2.00e-77	283.00
IUUC-Bta-013534	Bos taurus	87.36	0.00e+00	837.00
IUUC-Cja-019219	Callithrix jacchus	91.07	0.00e+00	852.00
IUUC-Cfa-020310	Canis familiaris	88.94	0.00e+00	825.00
IUUC-Cpo-021664	Cavia porcellus	87.99	0.00e+00	848.00
IUUC-Csa-024228	Chlorocebus sabaeus	92.59	0.00e+00	890.00
IUUC-Cho-024898	Choloepus hoffmanni	82.96	3.00e-111	395.00
IUUC-Dre-028538	Danio rerio	55.14	7.00e-133	467.00
IUUC-Dno-028861	Dasypus novemcinctus	87.20	0.00e+00	838.00
IUUC-Dor-030111	Dipodomys ordii	87.80	0.00e+00	846.00
IUUC-Ete-032444	Echinops telfairi	88.79	6.00e-165	573.00
IUUC-Eca-033676	Equus caballus	88.45	0.00e+00	845.00
IUUC-Eeu-034571	Erinaceus europaeus	78.65	0.00e+00	743.00
IUUC-Fca-035387	Felis catus	89.80	0.00e+00	854.00
IUUC-Fal-037310	Ficedula albicollis	73.41	0.00e+00	676.00
IUUC-Gmo-039224	Gadus morhua	53.46	1.00e-131	462.00
IUUC-Gga-040957	Gallus gallus	73.92	0.00e+00	686.00
IUUC-Gac-042385	Gasterosteus aculeatus	55.04	1.00e-143	502.00
IUUC-Ggo-044973	Gorilla gorilla	91.99	0.00e+00	884.00
IUUC-Hsa-046842	Homo sapiens	92.59	0.00e+00	890.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	92.86	0.00e+00	627.00
IUUC-Lch-049625	Latimeria chalumnae	62.64	4.00e-172	597.00
IUUC-Loc-052368	Lepisosteus oculatus	58.55	5.00e-156	543.00
IUUC-Laf-053678	Loxodonta africana	88.40	0.00e+00	841.00
IUUC-Mcc-055184	Macaca mulatta	92.36	0.00e+00	860.00
IUUC-Meu-056165	Macropus eugenii	74.38	0.00e+00	687.00
IUUC-Mga-060184	Meleagris gallopavo	70.25	3.00e-62	230.00
IUUC-Mmr-060965	Microcebus murinus	93.03	0.00e+00	883.00
IUUC-Mdo-062702	Monodelphis domestica	82.75	0.00e+00	810.00
IUUC-Mmu-063649	Mus musculus	76.67	5.00e-113	401.00
IUUC-Mpu-065747	Mustela putorius furo	89.54	0.00e+00	854.00
IUUC-Mlu-067873	Myotis lucifugus	88.26	0.00e+00	841.00
IUUC-Nle-069670	Nomascus leucogenys	92.81	0.00e+00	886.00
IUUC-Opr-070266	Ochotona princeps	80.00	0.00e+00	750.00
IUUC-Ont-071242	Oreochromis niloticus	54.19	2.00e-140	492.00
IUUC-Oan-072879	Ornithorhynchus anatinus	83.52	0.00e+00	780.00
IUUC-Ocu-074872	Oryctolagus cuniculus	66.67	7.00e-164	570.00
IUUC-Ola-087211	Oryzias latipes	48.80	5.00e-114	404.00
IUUC-Oar-089812	Ovis aries	86.49	0.00e+00	828.00
IUUC-Ptr-091067	Pan troglodytes	92.81	0.00e+00	892.00
IUUC-Pan-091778	Papio anubis	92.61	0.00e+00	885.00
IUUC-Psi-093932	Pelodiscus sinensis	75.57	0.00e+00	697.00
IUUC-Pfo-096845	Poecilia formosa	54.57	8.00e-137	480.00
IUUC-Pab-097892	Pongo abelii	90.12	0.00e+00	777.00
IUUC-Pca-100567	Procavia capensis	67.10	1.00e-172	598.00
IUUC-Pva-102560	Pteropus vampyrus	87.15	0.00e+00	825.00
IUUC-Rno-105662	Rattus norvegicus	84.21	0.00e+00	809.00
IUUC-Sha-107058	Sarcophilus harrisii	81.06	0.00e+00	786.00
IUUC-Sar-113643	Sorex araneus	77.38	0.00e+00	683.00
IUUC-Ssc-115791	Sus scrofa	89.54	0.00e+00	851.00
IUUC-Tgu-117145	Taeniopygia guttata	74.95	0.00e+00	696.00
IUUC-Tru-117875	Takifugu rubripes	55.70	5.00e-144	504.00
IUUC-Tsy-119030	Tarsius syrichta	89.84	0.00e+00	692.00
IUUC-Tni-119761	Tetraodon nigroviridis	54.27	5.00e-139	487.00
IUUC-Tbe-127757	Tupaia belangeri	87.56	0.00e+00	734.00
IUUC-Ttr-128762	Tursiops truncatus	90.63	0.00e+00	865.00
IUUC-Vpa-130360	Vicugna pacos	90.20	0.00e+00	861.00
IUUC-Xtr-131954	Xenopus tropicalis	62.86	4.00e-168	584.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence