iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017080

Ensembl Protein ID

Bra005900.1-P

UniProt Accession

M4CNW2; M4CNW2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005900	Bra005900.1	Bra005900.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.70e-69	233.9	199	518

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p++++  +lq+lf +l ++++++v+++el+k++++    +++++q+D+qE+ 
   Q: 199  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDAPTASIPLALQSLFYKL-QYNDTSVATKELTKSFGWDT--YDSFMQHDVQELN 286
           6******************************.....555555789***************.88999************877..67*********** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           ++l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v+g +     ++  +++
   Q: 287  RVLCEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCK-----DVYASFD 351
           ***********..........................7899*******************************************.....9****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavv 284
           ++++ e+leg+nky+ e   ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++  + + ++++ Y L++v+
   Q: 352  KYVEVERLEGDNKYHAEGH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDredgKYLSP-DADRSVRNLYTLHSVL 445
           ***************9985.79***********************************************9777666666.666678********** PP
   S: 285  vHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvl 333
           vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ l e+                        s+aY+l
   Q: 446  VHSGGVHGGHYYAFIRPtLSDQWYKFDDERVTKEDLKRALDEQYggeeelpqtnpgfnnppfkftkySNAYML 518
           ****************945677************999988866689999999999999999999999999998 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTMITPAPVD QQEDEVMLVP HSDVVDGPAQ PMEVSEAETA VSTVENQPAE EPPTLKFTWT 60
IPNFSRQNTR KLYSDVFVVG GYKWRILIFP KGNNVDHLSM YLDVADAANL PYGWSRYAQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTATGA TTACTCCGGC TCCCGTCGAT GTAAGCTCCG ATTCATCATT TCCTCCGTTA 60
ATTCGATTTC CCCCGTCGTG GCTCCGTTCT GTATTCGCCG TGAATCTGCT TCTGATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000761	Aegilops tauschii	76.63	0.00e+00	1696.00
IUUC-Atr-003067	Amborella trichopoda	85.55	0.00e+00	1486.00
IUUC-Aly-006427	Arabidopsis lyrata	95.07	0.00e+00	2116.00
IUUC-Ath-006591	Arabidopsis thaliana	94.71	0.00e+00	2086.00
IUUC-Bdi-015069	Brachypodium distachyon	82.40	0.00e+00	1811.00
IUUC-Bol-015621	Brassica oleracea	99.64	0.00e+00	2213.00
IUUC-Dse-031433	Dothistroma septosporum	35.45	5.00e-171	595.00
IUUC-Gma-043081	Glycine max	82.83	0.00e+00	1862.00
IUUC-Hvu-047749	Hordeum vulgare	81.98	0.00e+00	1527.00
IUUC-Lch-049847	Latimeria chalumnae	36.73	5.00e-168	584.00
IUUC-Lpe-051543	Leersia perrieri	81.18	0.00e+00	1738.00
IUUC-Loc-052234	Lepisosteus oculatus	35.05	1.00e-150	527.00
IUUC-Lma-053169	Leptosphaeria maculans	37.83	4.00e-175	608.00
IUUC-Mtr-058583	Medicago truncatula	82.48	0.00e+00	1853.00
IUUC-Mac-064796	Musa acuminata	82.92	0.00e+00	1846.00
IUUC-Oba-075811	Oryza barthii	78.25	0.00e+00	1692.00
IUUC-Obr-076514	Oryza brachyantha	83.26	0.00e+00	1812.00
IUUC-Ogl-077131	Oryza glaberrima	82.86	0.00e+00	1796.00
IUUC-Ome-081879	Oryza meridionalis	82.16	0.00e+00	1790.00
IUUC-Olu-087874	Ostreococcus lucimarinus	44.76	0.00e+00	903.00
IUUC-Oga-089059	Otolemur garnettii	34.77	7.00e-143	501.00
IUUC-Ppa-095922	Physcomitrella patens	78.82	0.00e+00	1771.00
IUUC-Pop-100083	Populus trichocarpa	86.30	0.00e+00	1927.00
IUUC-Ppe-101523	Prunus persica	85.83	0.00e+00	1893.00
IUUC-Sit-110268	Setaria italica	82.44	0.00e+00	1792.00
IUUC-Sly-111774	Solanum lycopersicum	82.65	0.00e+00	1861.00
IUUC-Stu-112387	Solanum tuberosum	82.56	0.00e+00	1863.00
IUUC-Sbi-114424	Sorghum bicolor	82.09	0.00e+00	1808.00
IUUC-Tca-121501	Theobroma cacao	86.94	0.00e+00	1927.00
IUUC-Tae-123032	Triticum aestivum	81.16	0.00e+00	1817.00
IUUC-Tur-126501	Triticum urartu	73.35	0.00e+00	1579.00
IUUC-Vvi-131308	Vitis vinifera	86.40	0.00e+00	1920.00
IUUC-Zma-135855	Zea mays	78.18	0.00e+00	1714.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence