iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095435

Ensembl Protein ID

PP1S1_465V6.1

UniProt Accession

A9RBG7; A9RBG7_PHYPA

Genbank Protein ID

EDQ83633.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DS544890

Gene Name

PHYPADRAFT_111002

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S1_465V6	PP1S1_465V6.1	PP1S1_465V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-07	31.8	434	466

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H+d+vt la   s+   l+s+s Dgt++ W+ r
   Q: 434  HNDDVTELATcaSGaACLASASKDGTVRFWSER 466
           999999999668777779************955 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGKTKRSCTQ AHGRVFPNGL SVEVRDWKSM ANPGSPGAYD PHKFFRGSPQ SPYPPQTTGY 60
QPSSPGSPVY HGPHYNQDHS PRQDPHIASQ FSQQSSQHPS SPSHSNHSRI PIPSMIPPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAAAAA CAAAGAGGGT AAGAGTTGCA TCCTTTAAAG GATGCAACAC CTTTTTTTGT 60
GTGTGTGTGT GTGTGTGTGT AGGATCAACA ACACATTTCA TTCCCTTTGT AAAAAGCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

ppp:PHYPADRAFT_111002

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence