iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100005

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

U-box domain-containing family protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_577702; POPTR_0017s12530g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s12530	POPTR_0017s12530.1	POPTR_0017s12530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-19	70.1	920	991

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           evpeefl+pI+ +lM+dPv+lp s+ t+dr  I ++l s+++ +P++r++lt ++l+ n++l++ i++++ ++
   Q: 920  EVPEEFLDPIQCTLMKDPVILPsSRTTVDRPVILRHLLSDNT-DPFNRSHLTVDMLISNTELKARIDEYIRSQ 991
           69********************9******************9.**************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATTSNKPQR SLEEIEDIIV RKILLISLTD SSDPRIIYLE MTAAEILSEG KDLKLNRDLI 60
ERVLIDRLSV QNPNAEPPFN YLLGCYRRAV DELKKIANMK DKIVKSELEL SIRQLKKLSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACGCACAG ACGCAAGTCA TTCCACAGAC TCTCTCTCTC TCTCTCGGAT TCTCAAGTTT 60
TCTTCTTTCT ACTCCCAACG AATCCTCAAA ATGCTTTCCG GTGAAAATTA AAAGATCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0000209--P:protein polyubiquitination
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pop:POPTR_0017s12530g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002479	Amborella trichopoda	73.89	0.00e+00	1222.00
IUUC-Aca-004866	Anolis carolinensis	29.77	4.00e-102	365.00
IUUC-Aly-006300	Arabidopsis lyrata	73.25	0.00e+00	1447.00
IUUC-Ath-006962	Arabidopsis thaliana	73.54	0.00e+00	1395.00
IUUC-Acl-008289	Aspergillus clavatus	29.18	4.00e-114	405.00
IUUC-Afl-008711	Aspergillus flavus	28.79	7.00e-112	398.00
IUUC-Afu-008766	Aspergillus fumigatus	29.81	1.00e-114	407.00
IUUC-Ani-009126	Aspergillus nidulans	28.38	1.00e-104	374.00
IUUC-Ang-009837	Aspergillus niger	29.45	4.00e-114	405.00
IUUC-Aor-009919	Aspergillus oryzae	27.97	3.00e-107	382.00
IUUC-Ame-011355	Astyanax mexicanus	32.36	5.00e-107	382.00
IUUC-Bci-013605	Botrytis cinerea	28.37	1.00e-99	357.00
IUUC-Bdi-015032	Brachypodium distachyon	62.36	0.00e+00	1149.00
IUUC-Bol-016124	Brassica oleracea	72.74	0.00e+00	1478.00
IUUC-Bra-017426	Brassica rapa	72.75	0.00e+00	1500.00
IUUC-Cfa-020045	Canis familiaris	29.74	5.00e-96	345.00
IUUC-Cpo-022309	Cavia porcellus	30.01	9.00e-98	351.00
IUUC-Csa-023765	Chlorocebus sabaeus	28.12	2.00e-85	310.00
IUUC-Cin-025533	Ciona intestinalis	31.30	5.00e-105	375.00
IUUC-Csv-026081	Ciona savignyi	43.92	3.00e-35	140.00
IUUC-Cgl-026710	Colletotrichum gloeosporioides	28.59	3.00e-101	362.00
IUUC-Cne-027098	Cryptococcus neoformans	29.92	7.00e-115	408.00
IUUC-Dre-027979	Danio rerio	30.19	5.00e-100	359.00
IUUC-Dor-030421	Dipodomys ordii	27.94	7.00e-74	271.00
IUUC-Dme-031666	Drosophila melanogaster	28.47	7.00e-93	335.00
IUUC-Ete-032519	Echinops telfairi	38.51	7.00e-58	219.00
IUUC-Fca-035658	Felis catus	29.71	9.00e-95	341.00
IUUC-Gmo-039379	Gadus morhua	31.77	2.00e-100	360.00
IUUC-Ggr-039851	Gaeumannomyces graminis	28.76	5.00e-91	328.00
IUUC-Gga-041136	Gallus gallus	30.36	3.00e-102	366.00
IUUC-Gma-043587	Glycine max	75.60	0.00e+00	1604.00
IUUC-Ggo-044685	Gorilla gorilla	28.31	1.00e-86	314.00
IUUC-Lch-050534	Latimeria chalumnae	30.02	1.00e-102	367.00
IUUC-Lpe-051022	Leersia perrieri	64.11	0.00e+00	1155.00
IUUC-Loc-052622	Lepisosteus oculatus	31.65	7.00e-101	362.00
IUUC-Meu-055991	Macropus eugenii	28.76	1.00e-84	308.00
IUUC-Mor-057064	Magnaporthe oryzae	26.90	8.00e-96	345.00
IUUC-Mpo-057452	Magnaporthe poae	28.05	5.00e-93	335.00
IUUC-Mtr-058016	Medicago truncatula	73.98	0.00e+00	1574.00
IUUC-Mla-058887	Melampsora laricipopulina	33.67	2.00e-110	393.00
IUUC-Mga-059497	Meleagris gallopavo	30.57	6.00e-102	365.00
IUUC-Mmr-061173	Microcebus murinus	38.48	1.00e-79	291.00
IUUC-Mac-065531	Musa acuminata	69.16	0.00e+00	1402.00
IUUC-Mpu-066444	Mustela putorius furo	28.68	3.00e-84	306.00
IUUC-Nfi-068590	Neosartorya fischeri	29.79	2.00e-115	409.00
IUUC-Ncr-068901	Neurospora crassa	26.86	2.00e-99	356.00
IUUC-Opr-071011	Ochotona princeps	37.13	2.00e-53	204.00
IUUC-Ont-072304	Oreochromis niloticus	31.31	1.00e-95	344.00
IUUC-Oan-073114	Ornithorhynchus anatinus	27.93	2.00e-81	296.00
IUUC-Oba-075073	Oryza barthii	60.67	0.00e+00	1189.00
IUUC-Obr-076452	Oryza brachyantha	62.52	0.00e+00	1179.00
IUUC-Ogl-077141	Oryza glaberrima	63.23	0.00e+00	1236.00
IUUC-Ogu-078116	Oryza glumaepatula	63.56	0.00e+00	1232.00
IUUC-Oin-079066	Oryza indica	63.13	0.00e+00	1235.00
IUUC-Olo-080253	Oryza longistaminata	65.41	0.00e+00	1082.00
IUUC-Ome-081263	Oryza meridionalis	63.47	0.00e+00	1231.00
IUUC-Oni-082019	Oryza nivara	63.47	0.00e+00	1230.00
IUUC-Opu-083558	Oryza punctata	63.35	0.00e+00	1222.00
IUUC-Oru-085002	Oryza rufipogon	63.32	0.00e+00	1238.00
IUUC-Osa-085980	Oryza sativa	63.11	0.00e+00	1244.00
IUUC-Ola-086323	Oryzias latipes	31.27	2.00e-98	353.00
IUUC-Olu-087901	Ostreococcus lucimarinus	37.69	3.00e-159	555.00
IUUC-Pan-092271	Papio anubis	28.22	3.00e-87	316.00
IUUC-Ppa-095989	Physcomitrella patens	56.77	0.00e+00	1079.00
IUUC-Pfo-096436	Poecilia formosa	31.18	1.00e-99	357.00
IUUC-Pab-098069	Pongo abelii	28.12	4.00e-83	302.00
IUUC-Ppe-101230	Prunus persica	79.75	0.00e+00	1655.00
IUUC-Pgr-103485	Puccinia graminis	30.91	5.00e-113	402.00
IUUC-Ptt-104001	Puccinia triticina	26.11	3.00e-33	136.00
IUUC-Sce-106135	Saccharomyces cerevisiae	28.08	1.00e-79	290.00
IUUC-Smo-109042	Selaginella moellendorffii	53.66	0.00e+00	1015.00
IUUC-Sly-110973	Solanum lycopersicum	69.83	0.00e+00	1239.00
IUUC-Sre-114967	Sporisorium reilianum	32.61	9.00e-112	397.00
IUUC-Ssc-115841	Sus scrofa	28.27	8.00e-87	315.00
IUUC-Tru-118193	Takifugu rubripes	31.62	5.00e-99	355.00
IUUC-Tni-120862	Tetraodon nigroviridis	31.77	1.00e-100	360.00
IUUC-Tca-121096	Theobroma cacao	76.84	0.00e+00	1587.00
IUUC-Tre-122104	Trichoderma reesei	28.71	5.00e-99	356.00
IUUC-Tme-127074	Tuber melanosporum	29.18	3.00e-97	349.00
IUUC-Ttr-128757	Tursiops truncatus	29.33	2.00e-93	337.00
IUUC-Uma-129550	Ustilago maydis	31.96	1.00e-108	387.00
IUUC-Vda-129901	Verticillium dahliae	27.41	4.00e-98	352.00
IUUC-Vpa-130215	Vicugna pacos	28.10	1.00e-84	307.00
IUUC-Vvi-130891	Vitis vinifera	78.93	0.00e+00	1636.00
IUUC-Xma-133772	Xiphophorus maculatus	31.18	2.00e-99	357.00
IUUC-Yli-134506	Yarrowia lipolytica	26.75	5.00e-89	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence