iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053724

Ensembl Protein ID

ENSLAFP00000011845.4

UniProt Accession

G3TCN9; G3TCN9_LOXAF

Protein Name

Uncharacterized protein

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000014125.4	ENSLAFT00000014143.4	ENSLAFP00000011845.4
ENSLAFG00000014125.4	ENSLAFT00000036454.1	ENSLAFP00000024116.1
ENSLAFG00000014125.4	ENSLAFT00000026977.1	ENSLAFP00000025683.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-06	29.2	2788	2821

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           d + ++++  d  +l++G+d+g+++vW +++ ++
   Q: 2788 DNIKAMQLsRDgQYLLTGGDNGVVRVWQVSDLKQ 2821
           6788888887779**************9988776 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MASEDNRVPS PPPTGDDGGG GGKGEETPTE GGALSLKPGI PIRGIRMKFA VLTGLVEVGE 60
VSNRDIVETV FNLLVGGQFD LEMNFIIQEG ESIICMVDLL EKCDITCQAE VWSVFTAILK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTAGTG AAGACAACCG TGTCCCTTCC CCGCCACCAA CAGGTGATGA CGGGGGAGGT 60
GGAGGAAAAG GAGAAGAAAC CCCGACTGAA GGGGGTGCCT TGTCCCTGAA ACCAGGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	40.03	3.00e-148	519.00
IUUC-Atr-002998	Amborella trichopoda	37.92	1.00e-142	502.00
IUUC-Apl-003632	Anas platyrhynchos	83.17	0.00e+00	868.00
IUUC-Aca-005124	Anolis carolinensis	79.25	0.00e+00	4517.00
IUUC-Aly-005407	Arabidopsis lyrata	38.49	6.00e-145	508.00
IUUC-Ath-007674	Arabidopsis thaliana	38.22	1.00e-143	505.00
IUUC-Ame-011487	Astyanax mexicanus	69.70	1.00e-176	612.00
IUUC-Bta-012509	Bos taurus	85.96	0.00e+00	4808.00
IUUC-Bdi-015051	Brachypodium distachyon	38.63	2.00e-145	509.00
IUUC-Bol-015261	Brassica oleracea	38.36	4.00e-140	493.00
IUUC-Bra-016877	Brassica rapa	38.22	2.00e-139	491.00
IUUC-Cja-018744	Callithrix jacchus	95.86	0.00e+00	1528.00
IUUC-Cfa-020786	Canis familiaris	90.64	0.00e+00	5162.00
IUUC-Cpo-021636	Cavia porcellus	87.38	0.00e+00	4876.00
IUUC-Ete-032481	Echinops telfairi	69.49	0.00e+00	1364.00
IUUC-Eca-033893	Equus caballus	91.36	0.00e+00	5178.00
IUUC-Fca-035726	Felis catus	96.76	0.00e+00	1027.00
IUUC-Fal-036871	Ficedula albicollis	78.29	0.00e+00	4468.00
IUUC-Gga-041206	Gallus gallus	78.11	0.00e+00	4529.00
IUUC-Gma-042772	Glycine max	39.62	6.00e-148	520.00
IUUC-Hsa-045763	Homo sapiens	69.66	0.00e+00	761.00
IUUC-Hvu-047134	Hordeum vulgare	39.30	9.00e-149	521.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	90.43	0.00e+00	5149.00
IUUC-Lch-050027	Latimeria chalumnae	85.54	0.00e+00	1385.00
IUUC-Lpe-050958	Leersia perrieri	39.57	3.00e-146	513.00
IUUC-Loc-052771	Lepisosteus oculatus	85.46	0.00e+00	1924.00
IUUC-Mcc-055200	Macaca mulatta	95.72	0.00e+00	1529.00
IUUC-Mtr-058372	Medicago truncatula	38.50	3.00e-140	494.00
IUUC-Mga-059851	Meleagris gallopavo	88.50	0.00e+00	1692.00
IUUC-Mmr-061112	Microcebus murinus	91.88	0.00e+00	5226.00
IUUC-Mdo-062727	Monodelphis domestica	82.00	0.00e+00	4158.00
IUUC-Mmu-064194	Mus musculus	96.23	0.00e+00	1531.00
IUUC-Mac-064991	Musa acuminata	34.63	1.00e-146	515.00
IUUC-Mpu-066074	Mustela putorius furo	91.03	0.00e+00	5168.00
IUUC-Mlu-067308	Myotis lucifugus	86.92	0.00e+00	4837.00
IUUC-Oan-073413	Ornithorhynchus anatinus	93.41	0.00e+00	1501.00
IUUC-Ocu-074483	Oryctolagus cuniculus	90.49	0.00e+00	2368.00
IUUC-Oba-075426	Oryza barthii	40.76	5.00e-147	516.00
IUUC-Obr-076907	Oryza brachyantha	40.57	2.00e-146	514.00
IUUC-Ogl-077620	Oryza glaberrima	36.27	5.00e-140	492.00
IUUC-Ogu-078751	Oryza glumaepatula	41.03	2.00e-148	520.00
IUUC-Oin-079673	Oryza indica	36.27	2.00e-140	495.00
IUUC-Olo-080417	Oryza longistaminata	36.27	9.00e-140	493.00
IUUC-Ome-081931	Oryza meridionalis	40.46	1.00e-146	515.00
IUUC-Oni-082349	Oryza nivara	40.76	4.00e-147	516.00
IUUC-Opu-083624	Oryza punctata	33.68	1.00e-126	449.00
IUUC-Oru-085197	Oryza rufipogon	40.62	2.00e-146	515.00
IUUC-Ola-087242	Oryzias latipes	72.47	0.00e+00	2107.00
IUUC-Olu-087890	Ostreococcus lucimarinus	34.65	1.00e-121	430.00
IUUC-Oga-088409	Otolemur garnettii	92.57	0.00e+00	2813.00
IUUC-Oar-089217	Ovis aries	89.36	0.00e+00	5050.00
IUUC-Ppa-095295	Physcomitrella patens	37.53	3.00e-142	501.00
IUUC-Pop-099604	Populus trichocarpa	38.24	4.00e-142	500.00
IUUC-Pca-100240	Procavia capensis	87.31	0.00e+00	2151.00
IUUC-Ppe-101836	Prunus persica	38.27	2.00e-143	504.00
IUUC-Rno-104971	Rattus norvegicus	95.57	0.00e+00	1613.00
IUUC-Sha-107387	Sarcophilus harrisii	83.83	0.00e+00	4779.00
IUUC-Smo-109504	Selaginella moellendorffii	39.27	3.00e-140	493.00
IUUC-Sit-110075	Setaria italica	39.57	6.00e-144	506.00
IUUC-Sly-111033	Solanum lycopersicum	38.76	1.00e-143	504.00
IUUC-Sbi-113954	Sorghum bicolor	54.25	3.00e-110	392.00
IUUC-Tgu-117304	Taeniopygia guttata	77.97	0.00e+00	4145.00
IUUC-Tru-118226	Takifugu rubripes	72.97	0.00e+00	1190.00
IUUC-Tni-120595	Tetraodon nigroviridis	65.68	0.00e+00	1019.00
IUUC-Tca-121572	Theobroma cacao	38.84	5.00e-147	517.00
IUUC-Tae-123719	Triticum aestivum	37.04	1.00e-122	434.00
IUUC-Tur-126212	Triticum urartu	39.62	2.00e-145	511.00
IUUC-Ttr-128452	Tursiops truncatus	88.19	0.00e+00	4893.00
IUUC-Vvi-130860	Vitis vinifera	39.68	2.00e-144	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence