iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054352

Ensembl Protein ID

ENSLAFP00000002605.2

UniProt Accession

G3SRR6; G3SRR6_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RYBP

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000003133.2	ENSLAFT00000003132.2	ENSLAFP00000002605.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	4.00e-12	45.8	12	40

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 2    eaqWaCsaCTflNePeavkCemCsrpRgc 30
           e++ +Cs+CTf+N++ea+kC++C+ ++g+
   Q: 12   EGFGDCSVCTFRNSAEAFKCSICDVRKGT 40
           7899***********************95 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

RPKRQAKPAA DEGFGDCSVC TFRNSAEAFK CSICDVRKGT STRKPRINSQ LVAQQVAQQY 60
ATPPPPKKEK KEKVEKQDKE KPEKDKEISP SVTKKNTNKK TKPKSDILKD PPSEANSIQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCCAAAAA GACAAGCGAA ACCTGCCGCA GATGAAGGCT TTGGGGATTG TAGCGTCTGC 60
ACCTTCAGAA ACAGCGCTGA AGCGTTTAAA TGCAGCATCT GCGATGTGAG GAAAGGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033774--YAF2_RYBP
IPR001876--Znf_RanBP2

Pfam

PF17219--YAF2_RYBP

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0031519--C:PcG protein complex
GO:0003677--F:DNA binding
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0035518--P:histone H2A monoubiquitination
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002182	Ailuropoda melanoleuca	99.54	1.00e-62	233.00
IUUC-Apl-003475	Anas platyrhynchos	96.33	2.00e-60	224.00
IUUC-Aca-004725	Anolis carolinensis	93.58	5.00e-59	220.00
IUUC-Bta-012724	Bos taurus	99.24	1.00e-36	145.00
IUUC-Cja-019921	Callithrix jacchus	99.54	6.00e-63	233.00
IUUC-Cfa-020363	Canis familiaris	99.54	2.00e-61	228.00
IUUC-Cpo-022408	Cavia porcellus	100.00	5.00e-37	146.00
IUUC-Csa-023628	Chlorocebus sabaeus	99.54	4.00e-63	234.00
IUUC-Cho-024871	Choloepus hoffmanni	99.25	1.00e-38	151.00
IUUC-Dno-029292	Dasypus novemcinctus	100.00	5.00e-37	146.00
IUUC-Dor-030691	Dipodomys ordii	100.00	4.00e-37	146.00
IUUC-Ete-032320	Echinops telfairi	97.71	2.00e-61	228.00
IUUC-Eca-034330	Equus caballus	99.54	5.00e-63	233.00
IUUC-Eeu-035193	Erinaceus europaeus	83.94	3.00e-43	167.00
IUUC-Fca-035645	Felis catus	100.00	5.00e-37	146.00
IUUC-Fal-036647	Ficedula albicollis	96.26	8.00e-58	216.00
IUUC-Gga-040262	Gallus gallus	96.33	2.00e-60	225.00
IUUC-Ggo-045026	Gorilla gorilla	100.00	5.00e-37	146.00
IUUC-Hsa-046566	Homo sapiens	99.54	7.00e-63	233.00
IUUC-Itr-048728	Ictidomys tridecemlineatus	97.71	3.00e-35	140.00
IUUC-Lch-050014	Latimeria chalumnae	83.19	1.00e-26	112.00
IUUC-Loc-051746	Lepisosteus oculatus	74.60	5.00e-62	230.00
IUUC-Mcc-055623	Macaca mulatta	99.54	2.00e-62	232.00
IUUC-Mpo-057432	Magnaporthe poae	43.75	1.40e-01	31.20
IUUC-Mga-059812	Meleagris gallopavo	96.18	2.00e-34	137.00
IUUC-Mmr-061669	Microcebus murinus	97.71	9.00e-42	162.00
IUUC-Mdo-061964	Monodelphis domestica	96.79	2.00e-61	228.00
IUUC-Mmu-063177	Mus musculus	98.62	4.00e-63	234.00
IUUC-Mpu-065711	Mustela putorius furo	99.54	4.00e-63	233.00
IUUC-Mlu-067973	Myotis lucifugus	97.59	2.00e-17	81.30
IUUC-Nle-069817	Nomascus leucogenys	99.54	6.00e-63	233.00
IUUC-Opr-070623	Ochotona princeps	100.00	4.00e-37	147.00
IUUC-Ont-071994	Oreochromis niloticus	62.07	2.00e-42	166.00
IUUC-Oan-072949	Ornithorhynchus anatinus	96.79	2.00e-61	228.00
IUUC-Ocu-074013	Oryctolagus cuniculus	99.07	4.00e-60	224.00
IUUC-Oar-090312	Ovis aries	99.24	2.00e-36	145.00
IUUC-Ptr-091316	Pan troglodytes	99.54	6.00e-61	227.00
IUUC-Pan-091877	Papio anubis	99.54	4.00e-63	234.00
IUUC-Psi-093195	Pelodiscus sinensis	95.85	5.00e-59	220.00
IUUC-Pfo-096909	Poecilia formosa	60.92	5.00e-43	167.00
IUUC-Pab-098578	Pongo abelii	99.54	3.00e-61	228.00
IUUC-Pca-100706	Procavia capensis	96.39	1.00e-42	165.00
IUUC-Pva-102682	Pteropus vampyrus	98.62	4.00e-60	223.00
IUUC-Rno-105156	Rattus norvegicus	98.62	7.00e-63	233.00
IUUC-Sha-107156	Sarcophilus harrisii	97.71	3.00e-35	141.00
IUUC-Sar-113234	Sorex araneus	93.49	3.00e-56	211.00
IUUC-Ssc-116262	Sus scrofa	100.00	5.00e-37	146.00
IUUC-Tgu-116730	Taeniopygia guttata	96.33	2.00e-60	224.00
IUUC-Tsy-119328	Tarsius syrichta	100.00	5.00e-37	146.00
IUUC-Tni-120066	Tetraodon nigroviridis	58.02	3.00e-44	171.00
IUUC-Tvi-122470	Trichoderma virens	41.38	8.20e-02	31.60
IUUC-Tbe-127332	Tupaia belangeri	99.08	2.00e-62	231.00
IUUC-Ttr-128963	Tursiops truncatus	99.54	6.00e-63	233.00
IUUC-Vpa-130270	Vicugna pacos	98.45	1.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence