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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Dme-031979
UUCD1 version UUC-DrM-00232
Ensembl Protein ID FBpp0090943
UniProt Accession Q8MSW9; Q8MSW9_DROME
Genbank Protein ID AAM49889.1; AAX52704.1
Protein Name LD17611p; U3 small nuclear riboprotein factor 55K
Genbank Nucleotide ID AY118520; AE013599
Gene Name U3-55K; CG10220; CG33505; Dmel_CG33505
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
FBgn0053505 FBtr0091445 FBpp0090943
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-21 76.1 337 366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
    gH+ds+ c+++ +d ++vsG+ Dg i +W+
   Q: 337 GHKDSIECVKYiNDEHFVSGGMDGAIGLWS 366
    8****************************8 PP
   

Organism Drosophila melanogaster
Protein Sequence
(Fasta)
MSSSFFLKPG AKGTKKRKNP AATTKGKPLK KGGKPGKSTP AAGGPVPKKQ RRPKEEDEEI 60
ASDDEEYNSD LGGDDNTLAF SSDEGEEETP QDKRLRLAKQ YLSEIEKQEA ERAEDRELAQ 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Dme-031979|E3,WD_repeat|Drosophila melanogaster
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCACAAAAGT ACTAAATTTG GACACGCGCC TTATATGCAC GTGGAGACGT TCCTTCGTTT 60
AAATTAAGTT TTTTATCAAA AATATTGAAT TAAAGCCGCG CAACTAGTTA CTTTCCACGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Dme-031979|E3,WD_repeat|Drosophila melanogaster
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0034511--F:U3 snoRNA binding
GO:0022008--P:neurogenesis
GO:0006364--P:rRNA processing

KEGG dme:Dmel_CG33505
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000586 Aegilops tauschii 30.66 1.00e-47 183.00
IUUC-Aml-002072 Ailuropoda melanoleuca 41.55 9.00e-89 319.00
IUUC-Atr-002824 Amborella trichopoda 35.09 3.00e-59 222.00
IUUC-Apl-003264 Anas platyrhynchos 46.47 5.00e-86 310.00
IUUC-Aca-004898 Anolis carolinensis 46.21 5.00e-94 337.00
IUUC-Aly-006383 Arabidopsis lyrata 33.33 6.00e-47 181.00
IUUC-Ath-007119 Arabidopsis thaliana 32.69 8.00e-60 223.00
IUUC-Ago-007710 Ashbya gossypii 24.07 4.00e-37 148.00
IUUC-Acl-008345 Aspergillus clavatus 28.90 5.00e-42 164.00
IUUC-Afl-008718 Aspergillus flavus 27.02 7.00e-42 164.00
IUUC-Afu-008966 Aspergillus fumigatus 32.95 7.00e-38 151.00
IUUC-Ani-009214 Aspergillus nidulans 27.17 2.00e-41 163.00
IUUC-Ang-009774 Aspergillus niger 30.35 3.00e-43 169.00
IUUC-Aor-009956 Aspergillus oryzae 27.02 7.00e-42 164.00
IUUC-Ate-010449 Aspergillus terreus 29.30 3.00e-41 162.00
IUUC-Ame-011860 Astyanax mexicanus 44.50 3.00e-98 351.00
IUUC-Bgr-012213 Blumeria graminis 27.86 8.00e-54 204.00
IUUC-Bta-012698 Bos taurus 44.10 3.00e-90 324.00
IUUC-Bci-013973 Botrytis cinerea 29.45 4.00e-53 201.00
IUUC-Bdi-014790 Brachypodium distachyon 34.38 2.00e-55 209.00
IUUC-Bol-015662 Brassica oleracea 32.90 6.00e-54 204.00
IUUC-Bra-016953 Brassica rapa 32.55 9.00e-54 203.00
IUUC-Cel-018616 Caenorhabditis elegans 34.90 1.00e-65 243.00
IUUC-Cja-019532 Callithrix jacchus 44.30 7.00e-94 336.00
IUUC-Cfa-020961 Canis familiaris 41.09 7.00e-86 310.00
IUUC-Cpo-021527 Cavia porcellus 44.39 4.00e-89 320.00
IUUC-Csa-023106 Chlorocebus sabaeus 45.32 1.00e-92 332.00
IUUC-Cin-025670 Ciona intestinalis 42.57 2.00e-96 345.00
IUUC-Csv-026172 Ciona savignyi 41.37 2.00e-91 328.00
IUUC-Cgl-026619 Colletotrichum gloeosporioides 30.97 7.00e-50 191.00
IUUC-Cne-027070 Cryptococcus neoformans 27.82 1.00e-37 150.00
IUUC-Cme-027125 Cyanidioschyzon merolae 25.67 2.00e-30 126.00
IUUC-Dre-027919 Danio rerio 44.36 6.00e-96 343.00
IUUC-Dno-029684 Dasypus novemcinctus 43.34 3.00e-67 248.00
IUUC-Dor-030363 Dipodomys ordii 47.96 8.00e-52 197.00
IUUC-Dse-031503 Dothistroma septosporum 29.28 3.00e-52 198.00
IUUC-Eca-033735 Equus caballus 43.33 2.00e-88 318.00
IUUC-Fca-036193 Felis catus 42.93 1.00e-90 326.00
IUUC-Fal-037058 Ficedula albicollis 44.06 2.00e-93 335.00
IUUC-Fox-038036 Fusarium oxysporum 30.45 2.00e-56 212.00
IUUC-Fso-038298 Fusarium solani 30.54 4.00e-57 214.00
IUUC-Gmo-038796 Gadus morhua 43.18 3.00e-84 304.00
IUUC-Ggr-040074 Gaeumannomyces graminis 24.44 3.00e-47 182.00
IUUC-Gga-040743 Gallus gallus 48.91 4.00e-78 283.00
IUUC-Gac-042583 Gasterosteus aculeatus 42.53 1.00e-97 348.00
IUUC-Gma-042659 Glycine max 35.10 3.00e-65 241.00
IUUC-Ggo-045543 Gorilla gorilla 45.06 4.00e-92 330.00
IUUC-Hsa-047017 Homo sapiens 45.32 2.00e-92 332.00
IUUC-Hvu-047173 Hordeum vulgare 34.29 8.00e-60 223.00
IUUC-Itr-048062 Ictidomys tridecemlineatus 41.97 3.00e-90 324.00
IUUC-Kpa-049262 Komagataella pastoris 26.95 1.00e-40 160.00
IUUC-Lch-050566 Latimeria chalumnae 43.72 1.00e-85 309.00
IUUC-Lpe-051651 Leersia perrieri 31.44 7.00e-56 210.00
IUUC-Loc-051997 Lepisosteus oculatus 44.23 3.00e-92 331.00
IUUC-Lma-053182 Leptosphaeria maculans 26.99 3.00e-39 155.00
IUUC-Laf-054105 Loxodonta africana 43.21 2.00e-89 322.00
IUUC-Mcc-055215 Macaca mulatta 45.32 7.00e-93 333.00
IUUC-Meu-055943 Macropus eugenii 41.98 5.00e-87 313.00
IUUC-Mor-057069 Magnaporthe oryzae 28.91 4.00e-53 201.00
IUUC-Mpo-057358 Magnaporthe poae 26.95 4.00e-43 168.00
IUUC-Mtr-058209 Medicago truncatula 33.92 3.00e-64 238.00
IUUC-Mla-059043 Melampsora laricipopulina 27.52 1.00e-41 164.00
IUUC-Mga-060024 Meleagris gallopavo 46.01 4.00e-83 300.00
IUUC-Mvi-060371 Microbotryum violaceum 29.35 4.00e-57 214.00
IUUC-Mmr-061403 Microcebus murinus 44.30 2.00e-93 335.00
IUUC-Mdo-063026 Monodelphis domestica 43.18 5.00e-90 324.00
IUUC-Mmu-063646 Mus musculus 44.56 6.00e-90 323.00
IUUC-Mac-064801 Musa acuminata 33.03 9.00e-64 236.00
IUUC-Mpu-065760 Mustela putorius furo 43.37 2.00e-90 325.00
IUUC-Mlu-067963 Myotis lucifugus 42.93 5.00e-89 320.00
IUUC-Nfi-068288 Neosartorya fischeri 28.43 1.00e-39 156.00
IUUC-Ncr-068679 Neurospora crassa 30.15 9.00e-46 177.00
IUUC-Nle-069766 Nomascus leucogenys 43.90 2.00e-87 315.00
IUUC-Opr-070906 Ochotona princeps 44.05 7.00e-91 327.00
IUUC-Ont-071661 Oreochromis niloticus 41.65 1.00e-95 342.00
IUUC-Oan-073465 Ornithorhynchus anatinus 34.24 2.00e-56 212.00
IUUC-Ocu-074263 Oryctolagus cuniculus 44.30 3.00e-91 328.00
IUUC-Oba-075607 Oryza barthii 32.18 9.00e-54 203.00
IUUC-Ogl-077387 Oryza glaberrima 33.05 4.00e-55 207.00
IUUC-Ogu-078323 Oryza glumaepatula 32.76 1.00e-54 206.00
IUUC-Oin-079977 Oryza indica 27.96 1.00e-36 147.00
IUUC-Olo-080857 Oryza longistaminata 32.76 1.00e-54 206.00
IUUC-Ome-081568 Oryza meridionalis 32.18 9.00e-54 203.00
IUUC-Oni-082685 Oryza nivara 33.05 3.00e-58 218.00
IUUC-Opu-084049 Oryza punctata 32.18 1.00e-53 203.00
IUUC-Oru-084348 Oryza rufipogon 33.05 3.00e-58 218.00
IUUC-Osa-086076 Oryza sativa 33.05 3.00e-58 218.00
IUUC-Ola-086991 Oryzias latipes 42.18 1.00e-97 349.00
IUUC-Olu-087891 Ostreococcus lucimarinus 32.12 5.00e-54 204.00
IUUC-Oga-088991 Otolemur garnettii 44.32 2.00e-90 325.00
IUUC-Oar-090430 Ovis aries 44.13 2.00e-90 325.00
IUUC-Ptr-091359 Pan troglodytes 45.32 2.00e-92 332.00
IUUC-Pan-092499 Papio anubis 45.32 1.00e-92 332.00
IUUC-Pma-094447 Petromyzon marinus 39.04 8.00e-71 259.00
IUUC-Pno-095008 Phaeosphaeria nodorum 27.40 5.00e-44 171.00
IUUC-Ppa-095680 Physcomitrella patens 31.80 7.00e-60 224.00
IUUC-Pfo-096430 Poecilia formosa 45.45 2.00e-93 335.00
IUUC-Pab-097649 Pongo abelii 44.81 1.00e-91 329.00
IUUC-Pop-100037 Populus trichocarpa 34.55 1.00e-61 229.00
IUUC-Pca-100317 Procavia capensis 54.29 9.00e-44 170.00
IUUC-Ppe-101999 Prunus persica 34.26 7.00e-65 240.00
IUUC-Pva-103046 Pteropus vampyrus 43.54 6.00e-93 333.00
IUUC-Pgr-103655 Puccinia graminis 33.33 2.00e-41 163.00
IUUC-Ptt-103812 Puccinia triticina 29.80 9.00e-42 164.00
IUUC-Pte-104243 Pyrenophora teres 27.57 1.00e-39 157.00
IUUC-Pyt-104512 Pyrenophora triticirepentis 27.36 2.00e-40 159.00
IUUC-Rno-104973 Rattus norvegicus 44.56 9.00e-91 326.00
IUUC-Sce-106329 Saccharomyces cerevisiae 22.42 1.00e-33 136.00
IUUC-Sha-106941 Sarcophilus harrisii 42.90 1.00e-87 315.00
IUUC-Sja-107821 Schizosaccharomyces japonicus 31.77 4.00e-60 224.00
IUUC-Spo-108329 Schizosaccharomyces pombe 30.58 5.00e-59 221.00
IUUC-Ssl-108552 Sclerotinia sclerotiorum 29.89 8.00e-53 200.00
IUUC-Smo-109659 Selaginella moellendorffii 35.22 4.00e-54 204.00
IUUC-Sit-109694 Setaria italica 32.21 2.00e-60 225.00
IUUC-Sly-111294 Solanum lycopersicum 34.37 2.00e-62 232.00
IUUC-Stu-112747 Solanum tuberosum 34.88 1.00e-63 236.00
IUUC-Sar-113315 Sorex araneus 44.17 4.00e-28 118.00
IUUC-Sbi-114694 Sorghum bicolor 31.46 2.00e-61 229.00
IUUC-Sre-114937 Sporisorium reilianum 25.83 9.00e-48 184.00
IUUC-Ssc-116127 Sus scrofa 43.06 4.00e-88 317.00
IUUC-Tgu-117242 Taeniopygia guttata 47.04 2.00e-62 231.00
IUUC-Tru-118285 Takifugu rubripes 44.27 3.00e-96 344.00
IUUC-Tni-120368 Tetraodon nigroviridis 43.59 4.00e-92 330.00
IUUC-Tca-121724 Theobroma cacao 32.41 1.00e-57 216.00
IUUC-Tre-122106 Trichoderma reesei 30.23 5.00e-58 218.00
IUUC-Tvi-122526 Trichoderma virens 29.67 1.00e-57 216.00
IUUC-Tae-122939 Triticum aestivum 33.81 6.00e-59 220.00
IUUC-Tur-126548 Triticum urartu 33.81 1.00e-58 220.00
IUUC-Tme-126985 Tuber melanosporum 31.84 2.00e-59 222.00
IUUC-Tbe-127923 Tupaia belangeri 43.89 3.00e-90 324.00
IUUC-Ttr-129308 Tursiops truncatus 41.34 5.00e-80 290.00
IUUC-Uma-129472 Ustilago maydis 34.60 2.00e-40 159.00
IUUC-Vda-129910 Verticillium dahliae 35.78 5.00e-55 208.00
IUUC-Vvi-131683 Vitis vinifera 35.24 4.00e-68 251.00
IUUC-Xtr-132118 Xenopus tropicalis 42.33 1.00e-91 329.00
IUUC-Xma-133804 Xiphophorus maculatus 44.50 4.00e-95 340.00
IUUC-Yli-134639 Yarrowia lipolytica 29.91 9.00e-46 177.00
IUUC-Zma-135779 Zea mays 32.15 2.00e-60 225.00
Created Date 25-Jun-2017

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