iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117282

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01027446

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000013357.1	ENSTGUT00000013907.1	ENSTGUP00000013749.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-49	164.0	585	623
UBD/Beta-Prp	4.30e-95	318.1	23	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v c++   d tl+++Gs D ++k+W l+ g++ +
   Q: 585  GHKLPVLCMDIcYDgTLIATGSADRNVKIWGLDFGDCHR 623
           79999***8887466*********************977 PP

UBD/Beta-Prp

   S: 52   eaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
            a+v+ v +  ++  +v +   +++ vwd ++g+ v +lkg +++v +l  sp+g +l++G +d  irv++l +g+    t++gh+++v
   Q: 23   RAGVAFVALRGERGRYVAVPACEHVFVWDTRKGEKVLILKGLKQQVSCLCPSPDGLHLAVGYEDGAIRVFNLLSGESTI-TFNGHRAAV 110
           5666666666666677777777778888888888888888888888888888888888888888888888888888888.888888888 PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           + ++++  g  lvsGs+D+ v +Wd+ +++ l++l+g h+d ++ + f ++++ l+++++d+ vk wdl t++c +tl gh++ v+ ++
   Q: 111  TALQYDHLGGRLVSGSKDTEVIVWDVINESGLYRLRG-HKDVITQVLFLKEKNLLITCAKDTLVKWWDLDTQHCFKTLVGHRAEVWGMA 198
           8888888888888888888888888888888888888.888888888888888888888888888888888888888888888888888 PP
   S: 230  fspnderlvsgssDgsiriWdlrs 253
           ++++++rl++gs+D  +r+Wdl+ 
   Q: 199  LLSKEKRLITGSADSELRVWDLTY 222
           888888888888888888888764 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MGLTRQYLRY EPAALFGLVA SARAGVAFVA LRGERGRYVA VPACEHVFVW DTRKGEKVLI 60
LKGLKQQVSC LCPSPDGLHL AVGYEDGAIR VFNLLSGEST ITFNGHRAAV TALQYDHLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCTGA CGCGGCAGTA CCTGCGCTAC GAGCCCGCCG CGCTCTTCGG GCTGGTGGCC 60
AGCGCCAGGG CCGGCGTGGC CTTCGTGGCG CTGCGCGGCG AGCGGGGCCG CTACGTGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

tgu:100222071

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.51	1.00e-149	523.00
IUUC-Aml-001245	Ailuropoda melanoleuca	77.46	0.00e+00	1397.00
IUUC-Atr-002700	Amborella trichopoda	38.07	1.00e-173	603.00
IUUC-Apl-004164	Anas platyrhynchos	84.80	0.00e+00	1129.00
IUUC-Aca-004765	Anolis carolinensis	75.35	0.00e+00	1373.00
IUUC-Aly-006503	Arabidopsis lyrata	38.35	2.00e-169	589.00
IUUC-Ath-006848	Arabidopsis thaliana	38.38	1.00e-174	606.00
IUUC-Ago-007909	Ashbya gossypii	35.21	2.00e-147	516.00
IUUC-Acl-008238	Aspergillus clavatus	37.83	2.00e-178	619.00
IUUC-Afl-008544	Aspergillus flavus	38.77	4.00e-175	608.00
IUUC-Afu-008868	Aspergillus fumigatus	37.85	2.00e-175	609.00
IUUC-Ani-009367	Aspergillus nidulans	37.36	3.00e-169	588.00
IUUC-Ang-009732	Aspergillus niger	37.76	5.00e-176	611.00
IUUC-Aor-010140	Aspergillus oryzae	38.62	3.00e-175	608.00
IUUC-Ate-010572	Aspergillus terreus	38.20	5.00e-175	608.00
IUUC-Ame-010956	Astyanax mexicanus	73.48	0.00e+00	811.00
IUUC-Bgr-012296	Blumeria graminis	36.30	4.00e-171	594.00
IUUC-Bta-012716	Bos taurus	77.25	0.00e+00	1442.00
IUUC-Bci-013699	Botrytis cinerea	35.77	2.00e-160	559.00
IUUC-Bdi-014525	Brachypodium distachyon	39.01	2.00e-161	562.00
IUUC-Bol-015117	Brassica oleracea	38.35	4.00e-169	588.00
IUUC-Bra-016869	Brassica rapa	38.98	4.00e-171	595.00
IUUC-Cel-018570	Caenorhabditis elegans	35.38	5.00e-130	458.00
IUUC-Cja-019425	Callithrix jacchus	76.97	0.00e+00	1386.00
IUUC-Cfa-020787	Canis familiaris	77.98	0.00e+00	1414.00
IUUC-Cpo-021729	Cavia porcellus	78.76	0.00e+00	1002.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.44	6.00e-106	378.00
IUUC-Csa-024098	Chlorocebus sabaeus	77.57	0.00e+00	1397.00
IUUC-Cho-024495	Choloepus hoffmanni	69.92	0.00e+00	818.00
IUUC-Cin-025245	Ciona intestinalis	48.97	2.00e-162	565.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.98	1.00e-162	566.00
IUUC-Cne-026835	Cryptococcus neoformans	44.86	3.00e-124	439.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.74	2.00e-38	154.00
IUUC-Dre-027874	Danio rerio	68.26	0.00e+00	1245.00
IUUC-Dno-028905	Dasypus novemcinctus	78.01	0.00e+00	1420.00
IUUC-Dor-030383	Dipodomys ordii	71.28	0.00e+00	683.00
IUUC-Dse-031297	Dothistroma septosporum	37.01	5.00e-167	581.00
IUUC-Dme-031956	Drosophila melanogaster	41.94	0.00e+00	675.00
IUUC-Ete-032608	Echinops telfairi	71.23	0.00e+00	783.00
IUUC-Eca-034181	Equus caballus	77.44	0.00e+00	1392.00
IUUC-Eeu-034495	Erinaceus europaeus	77.35	0.00e+00	1357.00
IUUC-Fca-035994	Felis catus	78.50	0.00e+00	1335.00
IUUC-Fal-036611	Ficedula albicollis	95.74	0.00e+00	1578.00
IUUC-Fox-037807	Fusarium oxysporum	36.58	8.00e-166	577.00
IUUC-Fso-038090	Fusarium solani	36.28	2.00e-161	562.00
IUUC-Gmo-039018	Gadus morhua	59.55	0.00e+00	653.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.61	6.00e-167	581.00
IUUC-Gga-040707	Gallus gallus	88.19	0.00e+00	1441.00
IUUC-Gac-042334	Gasterosteus aculeatus	59.53	0.00e+00	639.00
IUUC-Gma-043033	Glycine max	36.74	3.00e-171	595.00
IUUC-Ggo-045334	Gorilla gorilla	76.11	0.00e+00	1372.00
IUUC-Hsa-046996	Homo sapiens	77.14	0.00e+00	1374.00
IUUC-Hvu-047381	Hordeum vulgare	35.83	4.00e-88	318.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	77.55	0.00e+00	1399.00
IUUC-Kpa-049185	Komagataella pastoris	34.20	1.00e-149	523.00
IUUC-Lch-050098	Latimeria chalumnae	65.87	0.00e+00	1104.00
IUUC-Lpe-050710	Leersia perrieri	37.87	2.00e-166	579.00
IUUC-Loc-052745	Lepisosteus oculatus	66.27	0.00e+00	1167.00
IUUC-Lma-053104	Leptosphaeria maculans	36.99	1.00e-171	597.00
IUUC-Laf-054395	Loxodonta africana	77.25	0.00e+00	1401.00
IUUC-Mcc-055077	Macaca mulatta	77.68	0.00e+00	1392.00
IUUC-Meu-056418	Macropus eugenii	76.79	0.00e+00	683.00
IUUC-Mor-057031	Magnaporthe oryzae	36.61	3.00e-151	529.00
IUUC-Mpo-057420	Magnaporthe poae	36.65	3.00e-169	588.00
IUUC-Mtr-057838	Medicago truncatula	37.95	1.00e-179	623.00
IUUC-Mla-058854	Melampsora laricipopulina	35.75	1.00e-154	540.00
IUUC-Mga-060120	Meleagris gallopavo	81.61	0.00e+00	1323.00
IUUC-Mvi-060407	Microbotryum violaceum	43.72	2.00e-137	482.00
IUUC-Mmr-060635	Microcebus murinus	77.01	0.00e+00	1388.00
IUUC-Mdo-063023	Monodelphis domestica	78.22	0.00e+00	1420.00
IUUC-Mmu-064103	Mus musculus	76.27	0.00e+00	1396.00
IUUC-Mac-065569	Musa acuminata	38.33	8.00e-174	603.00
IUUC-Mpu-066462	Mustela putorius furo	78.20	0.00e+00	1427.00
IUUC-Mlu-067894	Myotis lucifugus	78.22	0.00e+00	1428.00
IUUC-Nfi-068321	Neosartorya fischeri	37.37	5.00e-174	604.00
IUUC-Ncr-068661	Neurospora crassa	36.44	2.00e-165	576.00
IUUC-Nle-069409	Nomascus leucogenys	77.36	0.00e+00	1384.00
IUUC-Opr-070445	Ochotona princeps	77.70	0.00e+00	880.00
IUUC-Ont-072339	Oreochromis niloticus	68.18	0.00e+00	1213.00
IUUC-Oan-073688	Ornithorhynchus anatinus	72.89	0.00e+00	1282.00
IUUC-Ocu-074227	Oryctolagus cuniculus	77.98	0.00e+00	1425.00
IUUC-Oba-075635	Oryza barthii	37.37	4.00e-159	555.00
IUUC-Obr-076897	Oryza brachyantha	38.53	9.00e-169	587.00
IUUC-Ogl-077555	Oryza glaberrima	37.37	4.00e-159	555.00
IUUC-Ogu-078724	Oryza glumaepatula	37.47	3.00e-160	558.00
IUUC-Oin-080030	Oryza indica	37.68	3.00e-160	558.00
IUUC-Olo-080687	Oryza longistaminata	35.49	4.00e-147	515.00
IUUC-Ome-081867	Oryza meridionalis	37.58	3.00e-160	558.00
IUUC-Oni-082559	Oryza nivara	37.68	3.00e-160	558.00
IUUC-Opu-083332	Oryza punctata	38.55	1.00e-151	530.00
IUUC-Oru-084455	Oryza rufipogon	37.68	2.00e-160	559.00
IUUC-Osa-085793	Oryza sativa	37.68	2.00e-160	559.00
IUUC-Ola-087395	Oryzias latipes	67.56	0.00e+00	1121.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.83	2.00e-163	569.00
IUUC-Oga-088574	Otolemur garnettii	78.33	0.00e+00	1421.00
IUUC-Oar-089453	Ovis aries	76.41	0.00e+00	1431.00
IUUC-Ptr-090694	Pan troglodytes	77.25	0.00e+00	1374.00
IUUC-Pan-092420	Papio anubis	76.97	0.00e+00	1384.00
IUUC-Psi-093683	Pelodiscus sinensis	83.04	0.00e+00	1479.00
IUUC-Pma-094197	Petromyzon marinus	59.21	1.00e-71	261.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.22	9.00e-167	580.00
IUUC-Ppa-095208	Physcomitrella patens	39.85	7.00e-177	613.00
IUUC-Pfo-096299	Poecilia formosa	68.32	0.00e+00	1220.00
IUUC-Pab-098706	Pongo abelii	77.25	0.00e+00	1382.00
IUUC-Pop-099275	Populus trichocarpa	38.36	1.00e-172	600.00
IUUC-Pca-100796	Procavia capensis	66.13	0.00e+00	1051.00
IUUC-Ppe-101861	Prunus persica	38.98	6.00e-175	607.00
IUUC-Pva-103241	Pteropus vampyrus	73.44	0.00e+00	1263.00
IUUC-Pgr-103432	Puccinia graminis	44.35	6.00e-126	444.00
IUUC-Ptt-103742	Puccinia triticina	41.11	8.00e-112	397.00
IUUC-Pte-104069	Pyrenophora teres	37.01	4.00e-160	558.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.59	5.00e-167	581.00
IUUC-Rno-105219	Rattus norvegicus	75.95	0.00e+00	1356.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.93	3.00e-158	552.00
IUUC-Sha-107550	Sarcophilus harrisii	77.73	0.00e+00	1410.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	36.62	1.00e-159	556.00
IUUC-Spo-108239	Schizosaccharomyces pombe	36.26	7.00e-168	584.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.17	2.00e-165	576.00
IUUC-Smo-108974	Selaginella moellendorffii	39.76	3.00e-174	605.00
IUUC-Sit-110000	Setaria italica	39.10	2.00e-157	549.00
IUUC-Sly-111595	Solanum lycopersicum	37.71	3.00e-173	602.00
IUUC-Stu-112516	Solanum tuberosum	37.69	3.00e-173	601.00
IUUC-Sar-113195	Sorex araneus	72.02	0.00e+00	1147.00
IUUC-Sbi-114465	Sorghum bicolor	37.25	5.00e-165	574.00
IUUC-Sre-115006	Sporisorium reilianum	34.99	3.00e-153	535.00
IUUC-Ssc-115929	Sus scrofa	77.44	0.00e+00	1391.00
IUUC-Tru-118406	Takifugu rubripes	65.91	0.00e+00	1158.00
IUUC-Tsy-119170	Tarsius syrichta	76.73	0.00e+00	1394.00
IUUC-Tni-119721	Tetraodon nigroviridis	65.12	0.00e+00	1138.00
IUUC-Tca-121761	Theobroma cacao	39.23	2.00e-180	625.00
IUUC-Tre-121908	Trichoderma reesei	36.17	4.00e-162	565.00
IUUC-Tvi-122547	Trichoderma virens	36.65	2.00e-164	572.00
IUUC-Tae-125433	Triticum aestivum	37.53	7.00e-160	557.00
IUUC-Tur-126811	Triticum urartu	39.42	2.00e-162	566.00
IUUC-Tme-126987	Tuber melanosporum	38.32	6.00e-178	617.00
IUUC-Tbe-127315	Tupaia belangeri	83.09	0.00e+00	778.00
IUUC-Ttr-129165	Tursiops truncatus	69.12	0.00e+00	1194.00
IUUC-Uma-129651	Ustilago maydis	34.53	1.00e-150	527.00
IUUC-Vda-129973	Verticillium dahliae	37.05	8.00e-156	544.00
IUUC-Vpa-130163	Vicugna pacos	64.82	7.00e-166	577.00
IUUC-Vvi-131402	Vitis vinifera	38.57	1.00e-175	609.00
IUUC-Xtr-132296	Xenopus tropicalis	73.22	0.00e+00	1288.00
IUUC-Xma-133028	Xiphophorus maculatus	68.29	0.00e+00	1225.00
IUUC-Yli-134484	Yarrowia lipolytica	37.87	3.00e-155	542.00
IUUC-Zma-135938	Zea mays	36.39	1.00e-163	570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence