iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000046022.3	ENSRNOT00000076065.2	ENSRNOP00000068002.1
ENSRNOG00000046022.3	ENSRNOT00000073644.2	ENSRNOP00000064692.2

Annotation

mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-16	59.6	166	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           H++ vtc+a     +t ++s+s D  i +WD+r+ +
   Q: 166  HAGQVTCVAAsphRETVFLSCSEDSRILLWDTRCPK 201
           99******998654499**************99876 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MRKESPPPLV PPAAREWNLP PNAPACMERQ LEAARYRSDG SLLLGASSLS GRCWAGSLWF 60
FKDPSAAPNE GFCSAGVQTE AGVADLTWVG DKGILVASDS GAVELWELDE NETLIVSKFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AGTCCGAAGA TCCCGTTGCG GGTATAGCAG ACGGAAAAGC GAGCTGGAAG 60
TGTAGACACA ACTCTCGCGA GATGTAGAGC GAATCCCTGG AGAGGGGCGG ATGCGCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002192	Ailuropoda melanoleuca	87.39	6.00e-174	603.00
IUUC-Apl-003921	Anas platyrhynchos	61.90	1.00e-66	245.00
IUUC-Aca-004870	Anolis carolinensis	69.82	8.00e-119	419.00
IUUC-Ame-011872	Astyanax mexicanus	44.09	6.00e-34	136.00
IUUC-Bta-013325	Bos taurus	88.22	8.00e-177	612.00
IUUC-Cja-019059	Callithrix jacchus	89.37	2.00e-177	614.00
IUUC-Cfa-021036	Canis familiaris	87.21	7.00e-153	533.00
IUUC-Cpo-022369	Cavia porcellus	89.08	4.00e-178	616.00
IUUC-Csa-023585	Chlorocebus sabaeus	89.66	1.00e-178	618.00
IUUC-Cho-024470	Choloepus hoffmanni	79.76	1.00e-112	399.00
IUUC-Dno-029867	Dasypus novemcinctus	85.92	1.00e-171	595.00
IUUC-Dor-030834	Dipodomys ordii	63.79	1.00e-114	405.00
IUUC-Ete-032245	Echinops telfairi	81.14	6.00e-138	483.00
IUUC-Eca-033360	Equus caballus	88.22	6.00e-170	589.00
IUUC-Eeu-035353	Erinaceus europaeus	87.64	2.00e-174	604.00
IUUC-Fca-036277	Felis catus	88.79	8.00e-177	612.00
IUUC-Fal-037383	Ficedula albicollis	63.77	2.00e-98	352.00
IUUC-Gmo-038575	Gadus morhua	52.51	3.00e-94	338.00
IUUC-Gga-040658	Gallus gallus	66.87	5.00e-126	443.00
IUUC-Gac-041463	Gasterosteus aculeatus	50.77	1.00e-81	296.00
IUUC-Ggo-045120	Gorilla gorilla	87.93	9.00e-176	608.00
IUUC-Hsa-046247	Homo sapiens	88.79	7.00e-177	612.00
IUUC-Itr-048292	Ictidomys tridecemlineatus	89.94	2.00e-174	604.00
IUUC-Lch-049741	Latimeria chalumnae	63.55	6.00e-110	390.00
IUUC-Loc-052695	Lepisosteus oculatus	56.94	6.00e-102	363.00
IUUC-Laf-054535	Loxodonta africana	89.66	3.00e-180	624.00
IUUC-Mcc-054699	Macaca mulatta	89.66	1.00e-178	618.00
IUUC-Meu-056053	Macropus eugenii	74.71	4.00e-136	477.00
IUUC-Mga-059672	Meleagris gallopavo	60.50	3.00e-68	250.00
IUUC-Mmr-060963	Microcebus murinus	89.94	1.00e-180	625.00
IUUC-Mdo-062694	Monodelphis domestica	73.62	3.00e-133	467.00
IUUC-Mmu-064031	Mus musculus	93.39	0.00e+00	637.00
IUUC-Mpu-066408	Mustela putorius furo	88.22	7.00e-177	612.00
IUUC-Mlu-068184	Myotis lucifugus	86.82	4.00e-172	597.00
IUUC-Nle-069251	Nomascus leucogenys	89.37	6.00e-178	616.00
IUUC-Opr-071156	Ochotona princeps	82.76	5.00e-163	566.00
IUUC-Ont-072683	Oreochromis niloticus	55.05	8.00e-93	333.00
IUUC-Oan-073042	Ornithorhynchus anatinus	72.45	5.00e-123	433.00
IUUC-Ocu-074843	Oryctolagus cuniculus	89.68	1.00e-173	602.00
IUUC-Ola-086929	Oryzias latipes	51.37	1.00e-85	309.00
IUUC-Oga-088237	Otolemur garnettii	90.23	5.00e-180	623.00
IUUC-Oar-089312	Ovis aries	87.89	4.00e-161	560.00
IUUC-Ptr-091625	Pan troglodytes	88.22	2.00e-176	611.00
IUUC-Pan-091902	Papio anubis	85.14	7.00e-167	579.00
IUUC-Psi-094035	Pelodiscus sinensis	70.51	3.00e-126	444.00
IUUC-Pma-094565	Petromyzon marinus	61.88	4.00e-50	190.00
IUUC-Pfo-097070	Poecilia formosa	52.52	7.00e-89	320.00
IUUC-Pab-098007	Pongo abelii	88.79	2.00e-177	614.00
IUUC-Pca-100513	Procavia capensis	69.49	4.00e-98	350.00
IUUC-Pva-102821	Pteropus vampyrus	83.91	2.00e-162	564.00
IUUC-Sha-106847	Sarcophilus harrisii	68.65	2.00e-88	318.00
IUUC-Sar-113451	Sorex araneus	80.52	4.00e-161	560.00
IUUC-Ssc-115978	Sus scrofa	86.78	1.00e-168	585.00
IUUC-Tgu-116745	Taeniopygia guttata	65.11	2.00e-91	328.00
IUUC-Tru-117945	Takifugu rubripes	53.75	7.00e-80	290.00
IUUC-Tsy-119059	Tarsius syrichta	84.70	2.00e-88	317.00
IUUC-Tni-120414	Tetraodon nigroviridis	52.28	3.00e-90	325.00
IUUC-Tbe-127559	Tupaia belangeri	91.38	0.00e+00	629.00
IUUC-Ttr-128505	Tursiops truncatus	86.78	9.00e-171	592.00
IUUC-Vpa-130350	Vicugna pacos	87.23	1.00e-96	345.00
IUUC-Xtr-132939	Xenopus tropicalis	59.75	9.00e-109	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence