iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112566

Ensembl Protein ID

PGSC0003DMT400082429

UniProt Accession

M1D5X2; M1D5X2_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400032540	PGSC0003DMT400082429	PGSC0003DMT400082429

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-22	78.4	136	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH+ sv+++++  s  +ll+s++ D t+ +W++
   Q: 136  GHKRSVNAVQWstSHaHLLASAGMDQTVCIWNV 168
           8**********9877999*************96 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDLLCKVYGG TSDEEDDNGG IHLQRPILPP PKRAKFENFH QVSNHLPLYK SNPSANLPAQ 60
ASLPGRYISK RERAAMASVE KVPDLSTTIS PTSSPVLGSI LDSVLPHNIL SALRDQTKVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTACTATT ACAATCAGAT CCCTTAAGAA TAATATACTG TATATTCAAA CGTTTTGATG 60
AACAATTGAA GAAATTCGTC TCAATTTTGC CCTAATTTTA GCTCTATTGA TTTTTTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sot:102598098

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	48.51	1.00e-48	187.00
IUUC-Aml-001588	Ailuropoda melanoleuca	37.22	6.00e-64	237.00
IUUC-Atr-003155	Amborella trichopoda	56.22	2.00e-136	478.00
IUUC-Apl-003544	Anas platyrhynchos	38.76	9.00e-52	194.00
IUUC-Aly-006510	Arabidopsis lyrata	61.23	2.00e-136	477.00
IUUC-Ath-007329	Arabidopsis thaliana	62.57	3.00e-138	483.00
IUUC-Ame-010607	Astyanax mexicanus	36.71	1.00e-42	164.00
IUUC-Bta-013542	Bos taurus	36.57	9.00e-63	233.00
IUUC-Bdi-014736	Brachypodium distachyon	56.15	9.00e-124	435.00
IUUC-Bol-016112	Brassica oleracea	54.55	1.00e-132	465.00
IUUC-Bra-016685	Brassica rapa	54.02	3.00e-135	473.00
IUUC-Cja-018883	Callithrix jacchus	36.57	6.00e-63	234.00
IUUC-Cfa-021278	Canis familiaris	36.89	2.00e-63	235.00
IUUC-Cpo-022449	Cavia porcellus	34.36	2.00e-59	221.00
IUUC-Csa-023916	Chlorocebus sabaeus	35.92	2.00e-62	232.00
IUUC-Cin-025210	Ciona intestinalis	33.20	8.00e-37	145.00
IUUC-Csv-026371	Ciona savignyi	30.52	4.00e-34	137.00
IUUC-Eca-033484	Equus caballus	38.71	7.00e-64	236.00
IUUC-Fca-035673	Felis catus	37.42	4.00e-64	238.00
IUUC-Fal-036795	Ficedula albicollis	35.35	4.00e-67	246.00
IUUC-Gmo-039062	Gadus morhua	34.44	1.00e-49	188.00
IUUC-Gga-040773	Gallus gallus	38.13	7.00e-61	226.00
IUUC-Gac-042364	Gasterosteus aculeatus	37.60	7.00e-54	202.00
IUUC-Gma-043100	Glycine max	60.64	2.00e-144	503.00
IUUC-Ggo-045220	Gorilla gorilla	35.92	1.00e-62	233.00
IUUC-Hsa-046511	Homo sapiens	35.92	2.00e-62	232.00
IUUC-Hvu-047431	Hordeum vulgare	57.40	2.00e-115	407.00
IUUC-Lch-049590	Latimeria chalumnae	38.85	5.00e-61	226.00
IUUC-Lpe-050810	Leersia perrieri	60.66	1.00e-88	318.00
IUUC-Loc-052196	Lepisosteus oculatus	35.92	3.00e-69	254.00
IUUC-Mcc-055622	Macaca mulatta	35.60	8.00e-62	230.00
IUUC-Mtr-058041	Medicago truncatula	57.51	1.00e-131	461.00
IUUC-Mga-060149	Meleagris gallopavo	38.65	3.00e-52	196.00
IUUC-Mmr-061552	Microcebus murinus	38.51	5.00e-65	240.00
IUUC-Mdo-061969	Monodelphis domestica	36.22	2.00e-62	232.00
IUUC-Mmu-063343	Mus musculus	35.92	2.00e-61	229.00
IUUC-Mac-065079	Musa acuminata	55.43	4.00e-129	453.00
IUUC-Mpu-065949	Mustela putorius furo	37.35	4.00e-47	181.00
IUUC-Mlu-067523	Myotis lucifugus	39.22	2.00e-46	179.00
IUUC-Ont-072361	Oreochromis niloticus	35.43	5.00e-66	244.00
IUUC-Oba-075367	Oryza barthii	50.79	6.00e-113	399.00
IUUC-Obr-076738	Oryza brachyantha	51.01	4.00e-115	406.00
IUUC-Ogu-078590	Oryza glumaepatula	50.56	2.00e-112	398.00
IUUC-Oin-079678	Oryza indica	51.32	2.00e-120	424.00
IUUC-Olo-080453	Oryza longistaminata	60.00	1.00e-101	361.00
IUUC-Ome-081794	Oryza meridionalis	58.44	1.00e-98	352.00
IUUC-Oni-082432	Oryza nivara	51.44	5.00e-120	423.00
IUUC-Opu-083897	Oryza punctata	55.70	4.00e-116	410.00
IUUC-Oru-085068	Oryza rufipogon	49.78	4.00e-111	393.00
IUUC-Osa-085805	Oryza sativa	51.10	3.00e-120	424.00
IUUC-Ola-087567	Oryzias latipes	38.91	6.00e-59	219.00
IUUC-Oga-088168	Otolemur garnettii	37.22	5.00e-62	230.00
IUUC-Oar-090158	Ovis aries	34.95	1.00e-55	209.00
IUUC-Ptr-090913	Pan troglodytes	29.77	2.00e-45	175.00
IUUC-Pan-092157	Papio anubis	35.92	1.00e-62	232.00
IUUC-Psi-093817	Pelodiscus sinensis	38.13	9.00e-61	225.00
IUUC-Pma-094263	Petromyzon marinus	35.03	6.00e-35	139.00
IUUC-Ppa-095302	Physcomitrella patens	48.13	1.00e-103	369.00
IUUC-Pfo-097526	Poecilia formosa	36.29	7.00e-67	246.00
IUUC-Pab-098152	Pongo abelii	36.90	6.00e-53	200.00
IUUC-Pop-099987	Populus trichocarpa	63.16	4.00e-140	489.00
IUUC-Ppe-101575	Prunus persica	57.99	2.00e-140	491.00
IUUC-Pva-102942	Pteropus vampyrus	38.41	3.00e-63	235.00
IUUC-Rno-104857	Rattus norvegicus	36.25	5.00e-62	230.00
IUUC-Sha-106763	Sarcophilus harrisii	36.54	4.00e-63	234.00
IUUC-Sit-110488	Setaria italica	51.01	3.00e-117	413.00
IUUC-Sly-110893	Solanum lycopersicum	96.56	0.00e+00	840.00
IUUC-Sar-113617	Sorex araneus	41.30	5.00e-28	117.00
IUUC-Sbi-114566	Sorghum bicolor	52.55	6.00e-122	429.00
IUUC-Tgu-117015	Taeniopygia guttata	35.35	4.00e-67	247.00
IUUC-Tca-121587	Theobroma cacao	61.52	2.00e-147	513.00
IUUC-Tae-124570	Triticum aestivum	56.84	9.00e-122	429.00
IUUC-Tur-126075	Triticum urartu	52.17	1.00e-52	198.00
IUUC-Tbe-127502	Tupaia belangeri	28.74	7.00e-39	154.00
IUUC-Ttr-129033	Tursiops truncatus	37.22	5.00e-64	237.00
IUUC-Vvi-131505	Vitis vinifera	60.74	5.00e-149	519.00
IUUC-Xtr-132851	Xenopus tropicalis	39.61	4.00e-51	192.00
IUUC-Xma-133463	Xiphophorus maculatus	36.67	3.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence