iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017077

Ensembl Protein ID

Bra039732.1-P

UniProt Accession

M4FF60; M4FF60_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039732	Bra039732.1	Bra039732.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.00e-15	57.8	81	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           vkvs++g+++++++dl+ + ++ ++lka++  ++          ++k+s + ++YeD+dGD++ l++D+++d++        s+ +l+i+k
   Q: 81   VKVSMDGAPYLRKVDLKMYKNYHEFLKALENmFKftigeysereGYKGSGFVPTYEDKDGDWM-LVGDVPWDMFSL------SCQKLRIMK 164
           9******************************73366999999*9*******************.**********99......999999997 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAYEEVINEL NLKDTELRLG LPGTDEQAEV SCVKSNKRQF HQSNDEHNLK EEYPSPPAKT 60
QIIGWPPVRS NRKNNKSVSY VKVSMDGAPY LRKVDLKMYK NYHEFLKALE NMFKFTIGEY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTATG AAGAAGTCAT CAATGAGCTT AACCTTAAGG ACACAGAGCT TCGTTTGGGA 60
TTGCCCGGAA CAGATGAACA AGCAGAGGTT TCTTGCGTCA AAAGCAACAA ACGTCAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016491	Brassica oleracea	90.12	1.00e-83	301.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence