iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3332__AT4G05497.1	fgenesh2_kg.6__3332__AT4G05497.1	fgenesh2_kg.6__3332__AT4G05497.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	8.50e-07	29.8	6	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 88   paptptpeegpdaglldrlpeeilveilklldkee.llraarvcrrwqelasqkalwktv 146
            +p p   ++ +++++++lp e+  +il++l + e ll+a+rvcr+w+++++++++w+++
   Q: 6    SSPLPPAMKNGESTNWTELPPELTSSILHRLGAIEiLLNAQRVCRSWRRICKDPSMWRKI 65
           45777777778889999**************55555************99999****986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASSSSSPLP PAMKNGESTN WTELPPELTS SILHRLGAIE ILLNAQRVCR SWRRICKDPS 60
MWRKIDIKIP KKFEDLFHDL EAVCRRAVDL SKGGLIEINI EHLVNTSLLN YIADRSSNLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGT CGTCTTCTTC CCCTTTGCCT CCGGCGATGA AAAACGGAGA GTCTACAAAC 60
TGGACAGAGC TACCGCCGGA ACTGACGTCA TCGATCCTGC ACCGTCTCGG TGCGATTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

KEGG

aly:ARALYDRAFT_490198

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-025971	Ciona savignyi	31.54	8.00e-11	60.10
IUUC-Dor-030932	Dipodomys ordii	32.47	1.00e-03	37.40
IUUC-Gac-041819	Gasterosteus aculeatus	26.92	9.00e-10	57.40
IUUC-Loc-052554	Lepisosteus oculatus	23.48	4.00e-08	52.00
IUUC-Meu-056447	Macropus eugenii	23.56	6.00e-04	38.90
IUUC-Mla-059163	Melampsora laricipopulina	23.33	7.00e-04	37.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence