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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105950
UUCD1 version UUC-RaN-01087
Ensembl Protein ID ENSRNOP00000015238.6
UniProt Accession F1LYZ4; F1LYZ4_RAT
Genbank Protein ID ENSRNOP00000015238
Protein Name Ubiquitin-specific peptidase 50
Genbank Nucleotide ID AABR07053661
Gene Name Usp50
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000011401.7 ENSRNOT00000015238.7 ENSRNOP00000015238.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.00e-88 298.1 40 356
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
    tGl+NlgNtCYmN++LQcL ++++l e++l+ k+ +l +++ e++++++ l++ +w +++ vsp+ +l+a++++ + f +
   Q: 40 TGLRNLGNTCYMNAILQCLCSTSPLVEYFLSgKYITAL-----QKDCSEVTTAFAYLMTDMWLGDSDCVSPEIFLSAVGSLYPAFLKKT 123
    7******************************4333333.....45678***************************************** PP
   S: 89 qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp 177
    qqDaqEfl ++l++l+e+lkk+ + + +e+ ++ ++ +k + +++s+i++lF+gql+ +i+cl+c++ + ++e f+ lslp+p
   Q: 124 QQDAQEFLIYVLNELHEALKKHCRGRASEK------RTAQNCCRKVPAHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLPIP 206
    *******************55222222222......34456678999999*************************************** PP
   S: 178 gkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfc 265
    ++ e+ slqdcL+ f+++++l+ +n+++c+ c+ kqe+ +++++k P++++lhLkRf + ++ +++k+ + +++pl+ Ldl+p+
   Q: 207 SEYEC---SLQDCLQCFFQQDTLTWNNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRF--DIQGAVKKKLRTDIHYPLTnLDLTPYI 290
    *****...****************************************************..66778********************** PP
   S: 266 tspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
    + +k + kY+L+avv+H G l++GHY+a++kn+ + W+ fdD++V+e++ ++v++ +taY+lfY
   Q: 291 CPVFRK---HPKYNLCAVVNHFGDLDGGHYTAFCKNSVTQaWYSFDDTRVSEIPDTSVQT---ATAYLLFYS 356
    *95544...89*************************98888*******************...********6 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MASHRPFPAD DFGAYYILAE CADYDSLPES ETQPHFQGVT GLRNLGNTCY MNAILQCLCS 60
TSPLVEYFLS GKYITALQKD CSEVTTAFAY LMTDMWLGDS DCVSPEIFLS AVGSLYPAFL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105950|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGTGACAATT GTGATGCAGG GGAGGACCCA AGAGGAACCA GGCTTGAGTT CAGTGAAGTC 60
AGAAAAGTAG GGAAAAGTGG AAAGTAGAGA AAAAGGGGGA AGGCGTTCAA ACTGTTCAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105950|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG rno:311399
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002089 Ailuropoda melanoleuca 84.45 0.00e+00 655.00
IUUC-Aca-005256 Anolis carolinensis 49.61 9.00e-102 363.00
IUUC-Bta-012753 Bos taurus 80.70 2.00e-178 618.00
IUUC-Cfa-020054 Canis familiaris 81.44 1.00e-163 568.00
IUUC-Cpo-021375 Cavia porcellus 77.10 7.00e-160 556.00
IUUC-Csa-023902 Chlorocebus sabaeus 79.55 2.00e-97 347.00
IUUC-Cho-024755 Choloepus hoffmanni 70.12 2.00e-135 475.00
IUUC-Dor-030311 Dipodomys ordii 83.43 5.00e-91 327.00
IUUC-Ete-032570 Echinops telfairi 64.38 1.00e-100 358.00
IUUC-Eca-034343 Equus caballus 83.65 0.00e+00 652.00
IUUC-Eeu-034510 Erinaceus europaeus 82.13 4.00e-157 546.00
IUUC-Fca-035920 Felis catus 83.65 0.00e+00 644.00
IUUC-Fal-036903 Ficedula albicollis 57.28 2.00e-105 375.00
IUUC-Gac-042261 Gasterosteus aculeatus 43.92 2.00e-73 268.00
IUUC-Ggo-045650 Gorilla gorilla 52.85 2.00e-83 301.00
IUUC-Hsa-046665 Homo sapiens 76.97 2.00e-152 531.00
IUUC-Itr-048167 Ictidomys tridecemlineatus 86.60 0.00e+00 676.00
IUUC-Lch-049925 Latimeria chalumnae 54.08 8.00e-105 373.00
IUUC-Loc-051880 Lepisosteus oculatus 50.61 8.00e-82 298.00
IUUC-Laf-054494 Loxodonta africana 83.65 0.00e+00 647.00
IUUC-Mcc-055507 Macaca mulatta 84.00 9.00e-175 605.00
IUUC-Meu-055906 Macropus eugenii 74.17 2.00e-146 511.00
IUUC-Mmr-061564 Microcebus murinus 62.13 5.00e-105 373.00
IUUC-Mdo-061800 Monodelphis domestica 77.26 3.00e-169 587.00
IUUC-Mmu-063618 Mus musculus 92.47 0.00e+00 748.00
IUUC-Mpu-066699 Mustela putorius furo 83.91 0.00e+00 653.00
IUUC-Mlu-067672 Myotis lucifugus 81.84 0.00e+00 636.00
IUUC-Opr-070949 Ochotona princeps 79.68 1.00e-146 511.00
IUUC-Ont-072200 Oreochromis niloticus 45.48 2.00e-69 256.00
IUUC-Oan-073725 Ornithorhynchus anatinus 64.78 2.00e-139 488.00
IUUC-Ocu-074021 Oryctolagus cuniculus 85.95 0.00e+00 667.00
IUUC-Oga-088258 Otolemur garnettii 85.13 1.00e-160 558.00
IUUC-Oar-089881 Ovis aries 82.84 0.00e+00 639.00
IUUC-Ptr-090988 Pan troglodytes 77.61 2.00e-148 518.00
IUUC-Pan-091773 Papio anubis 84.41 0.00e+00 642.00
IUUC-Psi-093243 Pelodiscus sinensis 70.50 6.00e-136 476.00
IUUC-Pab-097713 Pongo abelii 79.32 6.00e-165 573.00
IUUC-Pca-100226 Procavia capensis 66.27 9.00e-127 446.00
IUUC-Pva-103172 Pteropus vampyrus 83.14 2.00e-168 584.00
IUUC-Sha-107026 Sarcophilus harrisii 77.78 3.00e-165 574.00
IUUC-Ssc-116383 Sus scrofa 85.79 0.00e+00 665.00
IUUC-Tgu-116511 Taeniopygia guttata 56.08 2.00e-99 355.00
IUUC-Tbe-127808 Tupaia belangeri 78.10 2.00e-57 215.00
IUUC-Ttr-129046 Tursiops truncatus 80.18 2.00e-159 555.00
Created Date 25-Jun-2017

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