iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016977

Ensembl Protein ID

Bra012055.1-P

UniProt Accession

M4D6E6; M4D6E6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012055	Bra012055.1	Bra012055.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-09	38.9	225	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   d +++lpC+H+fh++C+  w     +++   +CP+C+
   Q: 225  CAICLEDYrfGDSLRLLPCQHAFHLSCIDSW-----LTKWGTSCPVCK 267
           ******8877777******************.....7888999****6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRDVIVCLLA APFLLQLSTA TVVLNSISAS FPHLPAKFDG SVPRNGICGA LFVANPLDGC 60
SPLLPSSNSS QQRTTKFALI IRGGCSFEDK LLHAQTSGFF QAVIVYDNLD NEDLLIMKVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGATG TTATTGTATG TCTACTCGCA GCTCCTTTCC TCCTACAACT ATCAACTGCC 60
ACCGTCGTAC TCAATTCTAT CTCCGCCTCT TTTCCTCATC TCCCCGCCAA ATTCGGTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0000306--C:extrinsic component of vacuolar membrane
GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006519	Arabidopsis lyrata	81.72	8.00e-118	416.00
IUUC-Ath-006590	Arabidopsis thaliana	78.12	6.00e-117	413.00
IUUC-Bol-015396	Brassica oleracea	92.14	8.00e-134	469.00
IUUC-Cho-024861	Choloepus hoffmanni	30.92	4.00e-18	85.10
IUUC-Dre-028786	Danio rerio	31.72	3.00e-26	112.00
IUUC-Dme-032142	Drosophila melanogaster	32.70	3.00e-20	93.20
IUUC-Gac-041339	Gasterosteus aculeatus	35.94	7.00e-33	134.00
IUUC-Loc-051914	Lepisosteus oculatus	32.79	3.00e-29	122.00
IUUC-Mla-059171	Melampsora laricipopulina	35.71	3.00e-09	56.60
IUUC-Ola-086637	Oryzias latipes	33.47	3.00e-28	119.00
IUUC-Pfo-097514	Poecilia formosa	33.46	3.00e-29	122.00
IUUC-Pop-099688	Populus trichocarpa	49.82	8.00e-65	239.00
IUUC-Ppe-101605	Prunus persica	49.82	6.00e-73	266.00
IUUC-Spo-108205	Schizosaccharomyces pombe	55.56	9.00e-13	67.00
IUUC-Tru-118584	Takifugu rubripes	33.94	8.00e-32	130.00
IUUC-Tni-120357	Tetraodon nigroviridis	35.25	5.00e-32	131.00
IUUC-Tca-121333	Theobroma cacao	52.17	4.00e-68	251.00
IUUC-Vvi-131036	Vitis vinifera	53.64	6.00e-64	237.00
IUUC-Xtr-132114	Xenopus tropicalis	31.94	2.00e-31	129.00
IUUC-Xma-133568	Xiphophorus maculatus	32.94	4.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence