iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050178

Ensembl Protein ID

ENSLACP00000007650.1

UniProt Accession

H3ADC9; H3ADC9_LATCH

Genbank Protein ID

ENSLACP00000007650

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01060474

Gene Name

RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006779.1	ENSLACT00000007714.1	ENSLACP00000007650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-07	30.7	549	590

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 549  CSVCITEYTEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 590
           9*******5554499****************......**********8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MENSDSADKG GNDQSEAQRQ SQLDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGTPGDVT 60
EEELLRRLQQ IKEGPPQQQQ GDTENRGMDS SEDGSNGDSI IDWLNSVRQT GNTTRSGQRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCTTGTT TGTGCGTGCG TCGCAGGGGA CGGTTTCCGG TTTTCCCAGT AACAATGGAG 60
AAGGTGGTAG TTTGAACCGC GTCTGCGAAA AGAGGGGAAG GAAAAAAAAA AAAAAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0017015--P:regulation of transforming growth factor beta receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000102	Aegilops tauschii	46.94	2.00e-13	70.50
IUUC-Aml-001407	Ailuropoda melanoleuca	68.56	9.00e-133	467.00
IUUC-Atr-002539	Amborella trichopoda	46.15	9.00e-16	77.80
IUUC-Apl-003969	Anas platyrhynchos	71.73	0.00e+00	724.00
IUUC-Aca-005377	Anolis carolinensis	72.21	7.00e-134	470.00
IUUC-Ame-011097	Astyanax mexicanus	65.48	5.00e-118	418.00
IUUC-Bta-013113	Bos taurus	70.21	2.00e-136	479.00
IUUC-Bdi-014392	Brachypodium distachyon	47.06	2.00e-14	72.40
IUUC-Bol-015085	Brassica oleracea	44.59	7.00e-15	74.70
IUUC-Bra-017624	Brassica rapa	44.59	7.00e-15	74.70
IUUC-Cja-018860	Callithrix jacchus	70.07	1.00e-127	449.00
IUUC-Cfa-020358	Canis familiaris	67.69	2.00e-133	469.00
IUUC-Cpo-022394	Cavia porcellus	53.12	3.00e-87	315.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	1.00e-13	67.40
IUUC-Csa-023242	Chlorocebus sabaeus	67.44	6.00e-120	424.00
IUUC-Cho-024536	Choloepus hoffmanni	59.33	9.00e-100	357.00
IUUC-Dre-027894	Danio rerio	58.18	3.00e-173	602.00
IUUC-Dno-029606	Dasypus novemcinctus	71.13	4.00e-138	484.00
IUUC-Dor-031042	Dipodomys ordii	63.97	4.00e-122	431.00
IUUC-Ete-033099	Echinops telfairi	68.52	5.00e-126	444.00
IUUC-Eca-033976	Equus caballus	70.67	3.00e-138	485.00
IUUC-Eeu-034964	Erinaceus europaeus	59.05	9.00e-92	330.00
IUUC-Fca-035662	Felis catus	68.78	2.00e-133	469.00
IUUC-Fal-036996	Ficedula albicollis	69.79	0.00e+00	695.00
IUUC-Gga-040816	Gallus gallus	72.86	0.00e+00	712.00
IUUC-Gac-041767	Gasterosteus aculeatus	66.00	2.00e-104	373.00
IUUC-Gma-043292	Glycine max	47.95	1.00e-15	77.80
IUUC-Ggo-044754	Gorilla gorilla	69.82	2.00e-133	469.00
IUUC-Hsa-045776	Homo sapiens	69.82	2.00e-133	469.00
IUUC-Itr-048044	Ictidomys tridecemlineatus	70.44	8.00e-133	467.00
IUUC-Lpe-050872	Leersia perrieri	58.33	4.00e-14	72.80
IUUC-Loc-052124	Lepisosteus oculatus	65.13	3.00e-173	601.00
IUUC-Laf-054328	Loxodonta africana	71.36	6.00e-133	468.00
IUUC-Mcc-054739	Macaca mulatta	70.04	1.00e-133	469.00
IUUC-Meu-056359	Macropus eugenii	57.57	9.00e-146	510.00
IUUC-Mtr-058167	Medicago truncatula	50.72	3.00e-15	75.90
IUUC-Mga-059838	Meleagris gallopavo	72.53	0.00e+00	721.00
IUUC-Mmr-060608	Microcebus murinus	67.54	6.00e-130	457.00
IUUC-Mdo-061961	Monodelphis domestica	67.66	2.00e-122	432.00
IUUC-Mmu-064278	Mus musculus	66.97	1.00e-125	443.00
IUUC-Mac-064703	Musa acuminata	44.44	1.00e-14	74.30
IUUC-Mpu-066539	Mustela putorius furo	62.31	3.00e-102	365.00
IUUC-Nle-069311	Nomascus leucogenys	70.04	6.00e-134	471.00
IUUC-Opr-071124	Ochotona princeps	71.10	8.00e-53	201.00
IUUC-Ont-071511	Oreochromis niloticus	65.52	3.00e-103	369.00
IUUC-Oan-073036	Ornithorhynchus anatinus	68.65	1.00e-131	463.00
IUUC-Ocu-073795	Oryctolagus cuniculus	64.49	3.00e-175	608.00
IUUC-Oba-075366	Oryza barthii	48.98	2.00e-14	73.60
IUUC-Obr-076503	Oryza brachyantha	42.11	5.00e-14	72.00
IUUC-Ogl-077114	Oryza glaberrima	48.98	2.00e-14	73.60
IUUC-Ogu-077986	Oryza glumaepatula	42.11	4.00e-14	72.80
IUUC-Oni-082260	Oryza nivara	42.11	4.00e-14	72.80
IUUC-Oru-084794	Oryza rufipogon	42.11	4.00e-14	72.80
IUUC-Osa-085348	Oryza sativa	42.11	4.00e-14	72.80
IUUC-Ola-087461	Oryzias latipes	66.10	4.00e-97	348.00
IUUC-Oga-088022	Otolemur garnettii	72.29	2.00e-142	498.00
IUUC-Oar-089348	Ovis aries	70.44	1.00e-136	479.00
IUUC-Ptr-090604	Pan troglodytes	69.82	3.00e-133	468.00
IUUC-Pan-092322	Papio anubis	70.04	1.00e-133	469.00
IUUC-Psi-093936	Pelodiscus sinensis	70.54	0.00e+00	657.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	2.00e-16	80.90
IUUC-Pfo-096616	Poecilia formosa	67.34	2.00e-97	349.00
IUUC-Pab-098671	Pongo abelii	70.04	9.00e-134	470.00
IUUC-Pop-099808	Populus trichocarpa	46.58	8.00e-16	77.80
IUUC-Pca-100263	Procavia capensis	67.42	0.00e+00	646.00
IUUC-Ppe-101995	Prunus persica	46.58	2.00e-15	77.00
IUUC-Pva-102709	Pteropus vampyrus	69.47	4.00e-67	249.00
IUUC-Rno-105759	Rattus norvegicus	68.36	2.00e-121	429.00
IUUC-Sha-106792	Sarcophilus harrisii	66.44	2.00e-116	413.00
IUUC-Sly-111747	Solanum lycopersicum	62.86	1.00e-12	67.40
IUUC-Stu-112609	Solanum tuberosum	47.22	3.00e-16	79.00
IUUC-Sar-113271	Sorex araneus	66.28	1.00e-113	403.00
IUUC-Sbi-114865	Sorghum bicolor	42.25	1.00e-13	69.30
IUUC-Ssc-115738	Sus scrofa	69.21	5.00e-137	481.00
IUUC-Tgu-117205	Taeniopygia guttata	72.70	0.00e+00	707.00
IUUC-Tru-118123	Takifugu rubripes	90.48	2.00e-53	203.00
IUUC-Tsy-119421	Tarsius syrichta	70.31	8.00e-141	493.00
IUUC-Tni-120299	Tetraodon nigroviridis	71.88	1.00e-87	317.00
IUUC-Tca-121367	Theobroma cacao	46.67	1.00e-15	77.40
IUUC-Tae-124344	Triticum aestivum	43.06	4.00e-13	67.80
IUUC-Tur-126084	Triticum urartu	48.89	1.00e-13	72.40
IUUC-Tbe-127543	Tupaia belangeri	67.90	0.00e+00	675.00
IUUC-Vpa-130058	Vicugna pacos	69.00	1.00e-132	466.00
IUUC-Vvi-131093	Vitis vinifera	46.58	2.00e-15	77.00
IUUC-Xtr-132663	Xenopus tropicalis	59.93	5.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence