iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087461

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04063777

Gene Name

rlim

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000006129.1	ENSORLT00000007706.1	ENSORLP00000007705.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-07	30.9	597	638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++ +g  ++ lpC H +h +C+ +w       s + +CP+Cr
   Q: 597  CSVCITEYAEGnkLRKLPCSHEYHVHCIDRW------LSENSTCPICR 638
           9*******5554599****************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MEGSDGVEQG GSDQPESQRR RQLDRLDREE AFYQFVNNLS EEDYRLMRDN NLLGNPGEVT 60
EDELISRLQQ IKGGPEQQSN NPATESTEEP VEQPESSEDP PGGDSLLDWL NTVRRTGNTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGGGT CTGACGGTGT CGAACAGGGT GGCAGTGACC AGCCTGAGTC ACAGCGCAGG 60
AGGCAGCTGG ATCGCCTGGA CAGAGAGGAG GCCTTCTACC AGTTTGTCAA CAACCTCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0017015--P:regulation of transforming growth factor beta receptor signaling pathway

KEGG

ola:101168551

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002539	Amborella trichopoda	44.62	5.00e-15	75.10
IUUC-Apl-003969	Anas platyrhynchos	62.18	2.00e-110	392.00
IUUC-Aca-005377	Anolis carolinensis	62.40	6.00e-109	387.00
IUUC-Ago-007872	Ashbya gossypii	31.03	1.00e-07	48.50
IUUC-Ame-011097	Astyanax mexicanus	66.15	5.00e-125	441.00
IUUC-Bta-013113	Bos taurus	83.33	3.00e-55	209.00
IUUC-Bdi-014282	Brachypodium distachyon	40.00	1.00e-14	73.20
IUUC-Bol-015085	Brassica oleracea	41.76	8.00e-15	74.30
IUUC-Bra-018013	Brassica rapa	47.14	2.00e-15	75.90
IUUC-Cpo-022394	Cavia porcellus	54.67	2.00e-76	280.00
IUUC-Cre-022755	Chlamydomonas reinhardtii	44.68	9.00e-14	67.40
IUUC-Cho-024536	Choloepus hoffmanni	61.63	2.00e-49	189.00
IUUC-Dre-027894	Danio rerio	58.03	1.00e-177	615.00
IUUC-Dor-031042	Dipodomys ordii	62.21	1.00e-50	194.00
IUUC-Fal-036996	Ficedula albicollis	61.27	2.00e-104	373.00
IUUC-Gga-040816	Gallus gallus	61.84	2.00e-108	385.00
IUUC-Gac-041767	Gasterosteus aculeatus	84.38	1.00e-135	476.00
IUUC-Gma-044353	Glycine max	47.95	3.00e-15	76.30
IUUC-Hvu-047221	Hordeum vulgare	47.83	2.00e-14	70.50
IUUC-Lch-050178	Latimeria chalumnae	64.38	2.00e-116	412.00
IUUC-Lpe-050872	Leersia perrieri	60.42	7.00e-14	71.60
IUUC-Loc-052124	Lepisosteus oculatus	69.77	9.00e-114	404.00
IUUC-Meu-056359	Macropus eugenii	82.61	7.00e-57	215.00
IUUC-Mtr-058167	Medicago truncatula	49.28	4.00e-14	72.40
IUUC-Mga-059838	Meleagris gallopavo	62.40	3.00e-110	392.00
IUUC-Mac-064703	Musa acuminata	44.44	3.00e-14	72.40
IUUC-Mpu-065891	Mustela putorius furo	52.36	8.00e-71	261.00
IUUC-Mlu-066930	Myotis lucifugus	82.14	2.00e-56	213.00
IUUC-Opr-071124	Ochotona princeps	62.28	6.00e-42	165.00
IUUC-Ont-071511	Oreochromis niloticus	81.58	2.00e-138	486.00
IUUC-Oan-073036	Ornithorhynchus anatinus	86.92	1.00e-55	211.00
IUUC-Ocu-073795	Oryctolagus cuniculus	83.04	4.00e-56	212.00
IUUC-Oba-075403	Oryza barthii	57.45	6.00e-14	72.00
IUUC-Obr-076503	Oryza brachyantha	57.45	8.00e-14	71.20
IUUC-Ogl-077574	Oryza glaberrima	57.45	6.00e-14	72.00
IUUC-Ogu-077986	Oryza glumaepatula	57.45	6.00e-14	72.00
IUUC-Oin-079091	Oryza indica	57.45	6.00e-14	72.00
IUUC-Ome-081627	Oryza meridionalis	57.45	6.00e-14	72.00
IUUC-Oni-082260	Oryza nivara	57.45	6.00e-14	72.00
IUUC-Opu-083444	Oryza punctata	46.15	6.00e-14	70.10
IUUC-Oru-084794	Oryza rufipogon	57.45	6.00e-14	72.00
IUUC-Osa-085348	Oryza sativa	57.45	6.00e-14	72.00
IUUC-Olu-087781	Ostreococcus lucimarinus	51.11	4.00e-13	67.00
IUUC-Oga-088750	Otolemur garnettii	52.41	6.00e-71	261.00
IUUC-Oar-089348	Ovis aries	84.26	2.00e-55	209.00
IUUC-Psi-093936	Pelodiscus sinensis	60.68	2.00e-100	359.00
IUUC-Ppa-095197	Physcomitrella patens	46.58	4.00e-16	79.70
IUUC-Pfo-096616	Poecilia formosa	84.04	6.00e-132	464.00
IUUC-Pop-099808	Populus trichocarpa	46.58	3.00e-15	75.90
IUUC-Ppe-101995	Prunus persica	46.58	5.00e-15	75.10
IUUC-Rno-105759	Rattus norvegicus	84.55	9.00e-56	211.00
IUUC-Smo-109206	Selaginella moellendorffii	45.83	3.00e-15	72.40
IUUC-Sly-111747	Solanum lycopersicum	62.86	3.00e-12	66.20
IUUC-Stu-112609	Solanum tuberosum	47.22	8.00e-16	77.40
IUUC-Sbi-114355	Sorghum bicolor	41.79	8.00e-14	69.30
IUUC-Sre-114989	Sporisorium reilianum	28.67	1.00e-11	65.90
IUUC-Ssc-115738	Sus scrofa	83.33	2.00e-55	209.00
IUUC-Tgu-117205	Taeniopygia guttata	62.54	6.00e-108	384.00
IUUC-Tru-118123	Takifugu rubripes	75.52	4.00e-111	395.00
IUUC-Tsy-119421	Tarsius syrichta	62.21	1.00e-50	194.00
IUUC-Tni-120299	Tetraodon nigroviridis	73.89	3.00e-111	395.00
IUUC-Tca-121367	Theobroma cacao	46.05	6.00e-15	75.10
IUUC-Tae-125871	Triticum aestivum	34.78	6.00e-16	77.40
IUUC-Tur-126109	Triticum urartu	35.16	1.00e-13	69.70
IUUC-Tbe-127543	Tupaia belangeri	56.38	1.00e-106	380.00
IUUC-Vvi-131093	Vitis vinifera	46.58	7.00e-15	74.70
IUUC-Xtr-132663	Xenopus tropicalis	64.73	4.00e-103	368.00
IUUC-Xma-133076	Xiphophorus maculatus	82.41	2.00e-147	515.00
IUUC-Yli-134448	Yarrowia lipolytica	35.29	9.00e-10	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence