iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121689

Ensembl Protein ID

EOX97913

UniProt Accession

A0A061E6K9; A0A061E6K9_THECC

Genbank Protein ID

EOX97913.1

Protein Name

PHD finger family protein / bromo-adjacent domain-containing protein isoform 2

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006822

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006822	EOX97912	EOX97912
TCM_006822	EOX97913	EOX97913

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-09	38.2	141	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHpaC ++++ee ++ ++ ++C++C+s
   Q: 141  YC-KCEMPYNPDDLMVQCEGCSDWFHPACIEMTAEEAKRLDH-FFCESCSS 189
           78.7*****************************888888887.******87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAKAKAPRRT LDSYTVKHIN KTIKAGDCVL MRPADQSKPS YVARIERIEA DARGGNVKVH 60
VRWYYRPEES IGGRRQFHGS KEVFLSDHYD VQSADTIEGK CTVHSFKSYT KLDAVGNDDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAGAGACA GCAAGCTTCC AAGAAAGCTC GCGTGGCAGC ATCATAAACA ATTATTTTCT 60
CGAAACGCTC GACGTGGGCA GCACCTGAAG TTTTGTAAAG TAATCCTTGT TGCATCGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004346	Anolis carolinensis	34.25	1.00e-10	61.60
IUUC-Aly-005443	Arabidopsis lyrata	74.64	9.00e-95	338.00
IUUC-Ath-006906	Arabidopsis thaliana	73.21	3.00e-93	333.00
IUUC-Bol-015574	Brassica oleracea	71.90	2.00e-91	327.00
IUUC-Bra-017900	Brassica rapa	72.86	6.00e-92	329.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	46.11	5.00e-47	179.00
IUUC-Gma-043965	Glycine max	91.39	4.00e-118	415.00
IUUC-Hvu-047723	Hordeum vulgare	66.03	2.00e-79	287.00
IUUC-Kpa-049165	Komagataella pastoris	30.30	2.00e-07	48.90
IUUC-Lpe-051138	Leersia perrieri	70.33	2.00e-90	323.00
IUUC-Loc-051927	Lepisosteus oculatus	29.92	5.00e-11	62.80
IUUC-Mtr-058621	Medicago truncatula	85.78	2.00e-110	390.00
IUUC-Oba-075855	Oryza barthii	69.86	4.00e-90	323.00
IUUC-Obr-076353	Oryza brachyantha	58.27	6.00e-86	311.00
IUUC-Ome-081714	Oryza meridionalis	70.00	7.00e-91	325.00
IUUC-Oni-082099	Oryza nivara	70.00	7.00e-91	325.00
IUUC-Olu-087802	Ostreococcus lucimarinus	46.99	6.00e-43	166.00
IUUC-Pno-094853	Phaeosphaeria nodorum	38.89	2.00e-06	47.40
IUUC-Pop-098853	Populus trichocarpa	89.95	3.00e-113	399.00
IUUC-Ppe-101818	Prunus persica	90.43	5.00e-116	409.00
IUUC-Pte-104158	Pyrenophora teres	37.04	6.00e-06	45.40
IUUC-Pyt-104466	Pyrenophora triticirepentis	37.04	5.00e-06	45.40
IUUC-Spo-108245	Schizosaccharomyces pombe	36.36	3.00e-06	45.80
IUUC-Ssl-108594	Sclerotinia sclerotiorum	27.27	1.00e-04	42.70
IUUC-Sit-110445	Setaria italica	70.33	2.00e-90	323.00
IUUC-Sly-110932	Solanum lycopersicum	84.69	9.00e-111	391.00
IUUC-Stu-112357	Solanum tuberosum	85.00	2.00e-106	377.00
IUUC-Sbi-113989	Sorghum bicolor	71.29	1.00e-91	328.00
IUUC-Vvi-131074	Vitis vinifera	88.04	2.00e-112	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence