iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000017302.2	ENSPFOT00000017395.2	ENSPFOP00000017373.2
ENSPFOG00000017302.2	ENSPFOT00000030347.1	ENSPFOP00000023724.1
ENSPFOG00000017302.2	ENSPFOT00000028526.1	ENSPFOP00000026246.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-11	43.5	313	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDl 30
            c+++ +d ++l++G+ D  + vW++
   Q: 313  LCVSWsPDgKYLATGGEDDLVTVWSF 338
           6*****999***************96 PP

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MAGDGGALKD INEIKSQFRT REGFYKLLTL SDSQQRGGLP RGPTAGATLG PGAGPGPIPG 60
AGVGLLQGPG AAAASSSSNA AANSSPAGFL PPVRVSMVKL QPEDPSEESE RVCFNIGREL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCAGGCCC GACCAGCAGC AGCAGACGCA CCGCTCCTCA CGCACTCCAC GCACACTGGA 60
AGCCAGCGGG AGGATGCTGC TGCTCGCACC GGCTCAGAGA AGCTTCCTCC GCGGGGTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010952	Astyanax mexicanus	95.15	0.00e+00	707.00
IUUC-Cpo-022431	Cavia porcellus	69.07	6.00e-134	471.00
IUUC-Dre-027736	Danio rerio	79.09	0.00e+00	991.00
IUUC-Dor-030174	Dipodomys ordii	70.18	1.00e-138	487.00
IUUC-Eca-034209	Equus caballus	69.03	2.00e-137	482.00
IUUC-Gmo-039336	Gadus morhua	97.83	6.00e-164	570.00
IUUC-Ggr-039757	Gaeumannomyces graminis	30.20	2.00e-48	187.00
IUUC-Gac-041494	Gasterosteus aculeatus	84.32	0.00e+00	994.00
IUUC-Lch-050150	Latimeria chalumnae	73.30	0.00e+00	796.00
IUUC-Loc-051931	Lepisosteus oculatus	75.44	0.00e+00	917.00
IUUC-Lma-053071	Leptosphaeria maculans	31.69	1.00e-48	188.00
IUUC-Meu-056033	Macropus eugenii	63.75	1.00e-112	400.00
IUUC-Mor-057249	Magnaporthe oryzae	30.38	3.00e-47	183.00
IUUC-Mpo-057472	Magnaporthe poae	30.11	1.00e-48	188.00
IUUC-Mla-059179	Melampsora laricipopulina	28.34	4.00e-29	123.00
IUUC-Mvi-060521	Microbotryum violaceum	32.40	7.00e-36	145.00
IUUC-Mpu-066104	Mustela putorius furo	69.01	7.00e-137	481.00
IUUC-Ont-071393	Oreochromis niloticus	95.90	0.00e+00	734.00
IUUC-Pyt-104509	Pyrenophora triticirepentis	35.50	9.00e-49	188.00
IUUC-Sar-113582	Sorex araneus	69.72	3.00e-98	352.00
IUUC-Sre-115177	Sporisorium reilianum	39.34	4.00e-32	133.00
IUUC-Tru-117821	Takifugu rubripes	85.55	0.00e+00	1006.00
IUUC-Tni-119812	Tetraodon nigroviridis	84.42	0.00e+00	967.00
IUUC-Uma-129485	Ustilago maydis	38.80	3.00e-32	134.00
IUUC-Xma-133855	Xiphophorus maculatus	90.37	0.00e+00	1009.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence