iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115300

Ensembl Protein ID

ENSSSCP00000001832.2

UniProt Accession

F1RRJ6; F1RRJ6_PIG

Genbank Protein ID

ENSSSCP00000001832

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CR974460

Gene Name

POLH

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000001683.2	ENSSSCT00000001879.2	ENSSSCP00000001832.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	81.63	0.00e+00	1092.00	IUUC-Hsa-046608
UBD/ZnF/UBZ	24.12	1.00e-18	90.10	IUUC-Sce-106137

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSNGQDRVVA LLDMDCFFVQ VEQRQNPHLK NKPCAVVQYK SWKGGGIVSV SYEARAFGVT 60
KSMWADDAKK LCPDLLLAQV LESRGKANLT KYREASAEVM EVMSRFAMIE RASIDEAFVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCGCGCGC GCTGTCTGAT CGCTGACGGG AGGGGCTGTG GGCAGATCGC GCTGGCTCAG 60
GCTGAACACG CCCGGCTGTG CGGACTGTTG CCCCAGGCGA GGATCATCTG CAGCCCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017061--DNA_pol_eta/kappa
IPR017961--DNA_pol_Y-fam_little_finger
IPR001126--UmuC

PROSITE

PS50173--UMUC

Pfam

PF00817--IMS
PF11799--IMS_C

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0071494--P:cellular response to UV-C
GO:0000731--P:DNA synthesis involved in DNA repair
GO:0006301--P:postreplication repair
GO:0006290--P:pyrimidine dimer repair

KEGG

ssc:100153104

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000901	Aegilops tauschii	42.13	2.00e-73	268.00
IUUC-Aml-001521	Ailuropoda melanoleuca	81.46	0.00e+00	1141.00
IUUC-Atr-002484	Amborella trichopoda	39.65	6.00e-89	321.00
IUUC-Apl-003696	Anas platyrhynchos	45.82	5.00e-104	371.00
IUUC-Aca-005058	Anolis carolinensis	53.88	0.00e+00	689.00
IUUC-Aly-006400	Arabidopsis lyrata	41.91	2.00e-83	303.00
IUUC-Ath-007504	Arabidopsis thaliana	39.83	4.00e-89	322.00
IUUC-Ago-007927	Ashbya gossypii	24.35	2.00e-21	97.10
IUUC-Acl-008115	Aspergillus clavatus	27.43	2.00e-39	157.00
IUUC-Afl-008392	Aspergillus flavus	28.68	2.00e-41	163.00
IUUC-Afu-008955	Aspergillus fumigatus	28.18	3.00e-40	159.00
IUUC-Ani-009140	Aspergillus nidulans	26.80	6.00e-39	155.00
IUUC-Ang-009579	Aspergillus niger	28.43	2.00e-39	156.00
IUUC-Aor-010144	Aspergillus oryzae	28.43	8.00e-41	161.00
IUUC-Ate-010589	Aspergillus terreus	29.97	7.00e-43	169.00
IUUC-Ame-010824	Astyanax mexicanus	50.55	0.00e+00	628.00
IUUC-Bgr-012128	Blumeria graminis	29.79	3.00e-43	169.00
IUUC-Bta-013570	Bos taurus	79.49	0.00e+00	1063.00
IUUC-Bci-013638	Botrytis cinerea	29.58	7.00e-46	178.00
IUUC-Bdi-014945	Brachypodium distachyon	40.09	5.00e-87	315.00
IUUC-Bol-016267	Brassica oleracea	40.93	5.00e-86	311.00
IUUC-Bra-017812	Brassica rapa	39.76	1.00e-83	303.00
IUUC-Cel-018475	Caenorhabditis elegans	37.78	1.00e-75	276.00
IUUC-Cja-019783	Callithrix jacchus	80.71	0.00e+00	992.00
IUUC-Cfa-021182	Canis familiaris	80.36	0.00e+00	1051.00
IUUC-Cpo-021579	Cavia porcellus	76.83	0.00e+00	1039.00
IUUC-Cre-022939	Chlamydomonas reinhardtii	31.25	2.00e-13	71.20
IUUC-Csa-023918	Chlorocebus sabaeus	80.90	0.00e+00	1096.00
IUUC-Cho-024661	Choloepus hoffmanni	80.22	0.00e+00	1102.00
IUUC-Cin-025717	Ciona intestinalis	48.11	3.00e-77	281.00
IUUC-Csv-026134	Ciona savignyi	50.57	1.00e-45	175.00
IUUC-Cgl-026574	Colletotrichum gloeosporioides	27.93	2.00e-33	137.00
IUUC-Cne-026787	Cryptococcus neoformans	27.88	7.00e-32	132.00
IUUC-Cme-027172	Cyanidioschyzon merolae	27.87	1.00e-26	114.00
IUUC-Dre-028594	Danio rerio	45.50	1.00e-170	593.00
IUUC-Dno-029221	Dasypus novemcinctus	80.11	0.00e+00	1081.00
IUUC-Dor-030818	Dipodomys ordii	83.64	4.00e-112	398.00
IUUC-Dse-031223	Dothistroma septosporum	27.42	8.00e-34	138.00
IUUC-Dme-031727	Drosophila melanogaster	38.29	1.00e-97	350.00
IUUC-Ete-033036	Echinops telfairi	76.23	0.00e+00	977.00
IUUC-Eca-034307	Equus caballus	81.91	0.00e+00	1032.00
IUUC-Eeu-035197	Erinaceus europaeus	67.70	2.00e-146	512.00
IUUC-Fca-035449	Felis catus	83.15	0.00e+00	1082.00
IUUC-Fal-036901	Ficedula albicollis	56.19	1.00e-88	320.00
IUUC-Fox-037911	Fusarium oxysporum	28.99	8.00e-41	161.00
IUUC-Fso-038351	Fusarium solani	28.37	5.00e-37	149.00
IUUC-Gmo-039408	Gadus morhua	48.48	7.00e-175	607.00
IUUC-Ggr-039856	Gaeumannomyces graminis	28.65	1.00e-36	147.00
IUUC-Gga-040686	Gallus gallus	51.10	1.00e-161	563.00
IUUC-Gac-042191	Gasterosteus aculeatus	48.69	4.00e-178	617.00
IUUC-Gma-043642	Glycine max	41.34	2.00e-87	317.00
IUUC-Hsa-046608	Homo sapiens	80.93	0.00e+00	1061.00
IUUC-Hvu-047627	Hordeum vulgare	40.00	1.00e-84	307.00
IUUC-Itr-048689	Ictidomys tridecemlineatus	78.07	0.00e+00	1051.00
IUUC-Kpa-049113	Komagataella pastoris	26.37	1.00e-24	107.00
IUUC-Lch-049987	Latimeria chalumnae	68.47	1.00e-90	327.00
IUUC-Lpe-051542	Leersia perrieri	39.47	7.00e-86	311.00
IUUC-Loc-052036	Lepisosteus oculatus	59.56	7.00e-150	523.00
IUUC-Lma-053317	Leptosphaeria maculans	29.09	8.00e-39	155.00
IUUC-Laf-053792	Loxodonta africana	80.48	0.00e+00	1104.00
IUUC-Mcc-055144	Macaca mulatta	87.20	0.00e+00	733.00
IUUC-Meu-056553	Macropus eugenii	71.47	8.00e-145	506.00
IUUC-Mor-057207	Magnaporthe oryzae	28.42	4.00e-36	145.00
IUUC-Mpo-057497	Magnaporthe poae	28.17	3.00e-37	149.00
IUUC-Mtr-058741	Medicago truncatula	42.29	9.00e-91	327.00
IUUC-Mla-059160	Melampsora laricipopulina	30.49	4.00e-40	159.00
IUUC-Mga-059487	Meleagris gallopavo	47.12	2.00e-119	422.00
IUUC-Mvi-060508	Microbotryum violaceum	37.06	1.00e-28	121.00
IUUC-Mmr-061610	Microcebus murinus	78.79	0.00e+00	1070.00
IUUC-Mdo-061810	Monodelphis domestica	66.90	0.00e+00	837.00
IUUC-Mmu-063400	Mus musculus	73.89	0.00e+00	905.00
IUUC-Mac-064894	Musa acuminata	37.10	9.00e-86	310.00
IUUC-Mpu-066225	Mustela putorius furo	79.69	0.00e+00	985.00
IUUC-Mlu-067052	Myotis lucifugus	83.57	0.00e+00	1094.00
IUUC-Nfi-068296	Neosartorya fischeri	27.68	7.00e-39	155.00
IUUC-Ncr-068957	Neurospora crassa	31.30	1.00e-44	174.00
IUUC-Nle-069730	Nomascus leucogenys	78.26	0.00e+00	1013.00
IUUC-Opr-070411	Ochotona princeps	67.83	3.00e-177	615.00
IUUC-Ont-071788	Oreochromis niloticus	47.43	0.00e+00	632.00
IUUC-Oan-073017	Ornithorhynchus anatinus	71.89	0.00e+00	689.00
IUUC-Ocu-074059	Oryctolagus cuniculus	73.94	0.00e+00	932.00
IUUC-Oba-075708	Oryza barthii	39.91	6.00e-87	314.00
IUUC-Obr-076475	Oryza brachyantha	38.22	8.00e-86	311.00
IUUC-Ogl-077868	Oryza glaberrima	39.69	6.00e-87	315.00
IUUC-Ogu-078157	Oryza glumaepatula	39.69	7.00e-87	314.00
IUUC-Oin-079707	Oryza indica	41.93	2.00e-75	276.00
IUUC-Olo-080763	Oryza longistaminata	41.37	5.00e-85	308.00
IUUC-Oni-082290	Oryza nivara	38.94	7.00e-86	311.00
IUUC-Opu-083795	Oryza punctata	39.14	1.00e-85	310.00
IUUC-Oru-085178	Oryza rufipogon	39.69	9.00e-87	314.00
IUUC-Osa-086176	Oryza sativa	39.69	7.00e-87	314.00
IUUC-Ola-087517	Oryzias latipes	50.21	0.00e+00	652.00
IUUC-Olu-087640	Ostreococcus lucimarinus	29.98	5.00e-51	195.00
IUUC-Oga-088142	Otolemur garnettii	78.14	0.00e+00	1038.00
IUUC-Oar-089974	Ovis aries	79.49	0.00e+00	1028.00
IUUC-Ptr-090591	Pan troglodytes	81.07	0.00e+00	1063.00
IUUC-Pan-091688	Papio anubis	81.18	0.00e+00	1101.00
IUUC-Psi-092952	Pelodiscus sinensis	50.80	1.00e-156	546.00
IUUC-Pma-094704	Petromyzon marinus	52.26	2.00e-29	123.00
IUUC-Pno-094892	Phaeosphaeria nodorum	29.33	8.00e-36	145.00
IUUC-Ppa-095504	Physcomitrella patens	43.87	4.00e-77	282.00
IUUC-Pfo-096999	Poecilia formosa	47.74	2.00e-175	608.00
IUUC-Pab-098195	Pongo abelii	78.54	0.00e+00	684.00
IUUC-Pop-099023	Populus trichocarpa	39.78	2.00e-85	309.00
IUUC-Pca-100689	Procavia capensis	76.25	0.00e+00	815.00
IUUC-Ppe-101947	Prunus persica	40.48	2.00e-86	313.00
IUUC-Pva-102392	Pteropus vampyrus	82.30	0.00e+00	1091.00
IUUC-Pgr-103588	Puccinia graminis	31.62	7.00e-42	165.00
IUUC-Ptt-103860	Puccinia triticina	30.22	3.00e-36	146.00
IUUC-Pte-104326	Pyrenophora teres	27.79	6.00e-37	148.00
IUUC-Pyt-104573	Pyrenophora triticirepentis	28.05	6.00e-37	148.00
IUUC-Rno-105209	Rattus norvegicus	73.47	0.00e+00	988.00
IUUC-Sce-106137	Saccharomyces cerevisiae	22.95	2.00e-21	97.10
IUUC-Sha-106467	Sarcophilus harrisii	66.71	0.00e+00	855.00
IUUC-Sja-107701	Schizosaccharomyces japonicus	31.08	2.00e-33	137.00
IUUC-Spo-108204	Schizosaccharomyces pombe	28.61	4.00e-36	146.00
IUUC-Ssl-108431	Sclerotinia sclerotiorum	28.89	8.00e-35	141.00
IUUC-Smo-109141	Selaginella moellendorffii	43.09	1.00e-74	273.00
IUUC-Sit-110280	Setaria italica	40.73	2.00e-89	323.00
IUUC-Sly-111756	Solanum lycopersicum	38.22	5.00e-83	301.00
IUUC-Stu-112504	Solanum tuberosum	38.96	4.00e-60	224.00
IUUC-Sar-113088	Sorex araneus	64.42	0.00e+00	832.00
IUUC-Sbi-114731	Sorghum bicolor	41.72	3.00e-90	325.00
IUUC-Sre-115144	Sporisorium reilianum	33.53	4.00e-21	96.70
IUUC-Tgu-117128	Taeniopygia guttata	62.86	3.00e-77	281.00
IUUC-Tru-118550	Takifugu rubripes	49.79	0.00e+00	657.00
IUUC-Tni-120908	Tetraodon nigroviridis	50.35	0.00e+00	659.00
IUUC-Tca-121449	Theobroma cacao	41.42	5.00e-87	315.00
IUUC-Tre-122135	Trichoderma reesei	29.58	2.00e-38	154.00
IUUC-Tvi-122467	Trichoderma virens	29.29	2.00e-39	157.00
IUUC-Tae-125677	Triticum aestivum	37.08	2.00e-85	310.00
IUUC-Tur-126600	Triticum urartu	38.37	1.00e-76	280.00
IUUC-Tme-126967	Tuber melanosporum	31.45	2.00e-42	166.00
IUUC-Tbe-127444	Tupaia belangeri	79.32	0.00e+00	1075.00
IUUC-Ttr-128797	Tursiops truncatus	80.76	0.00e+00	1035.00
IUUC-Uma-129609	Ustilago maydis	31.93	5.00e-20	92.80
IUUC-Vda-130004	Verticillium dahliae	27.93	1.00e-38	154.00
IUUC-Vpa-130029	Vicugna pacos	87.00	2.00e-159	555.00
IUUC-Vvi-131117	Vitis vinifera	41.16	1.00e-80	294.00
IUUC-Xma-133279	Xiphophorus maculatus	49.51	0.00e+00	635.00
IUUC-Yli-134477	Yarrowia lipolytica	25.67	2.00e-23	103.00
IUUC-Zma-135837	Zea mays	40.26	6.00e-90	324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence