iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058724

Ensembl Protein ID

KEH42443

UniProt Accession

A0A072VM11; A0A072VM11_MEDTR

Genbank Protein ID

KEH42443.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g069345

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g069345	KEH42443	KEH42443

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-29	100.0	473	504
UBD/Beta-Prp	4.90e-41	142.3	208	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWD 29
           gH+  v+c+++    +  +l+s+sdD+ti++W 
   Q: 473  GHSLTVNCVSWnpkrP-QMLASASDDHTIRIWG 504
           7999********6543.99*************7 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           ++++l+gh+++v+ ++fs sgd+l+s s+d t+ +w+++++ +l    tlsgh+++v+ v+++pd+  l ++++ ++++lWd++tg++ +t+  ++   v 
   Q: 208  TTQILTGHKNEVWFVQFSNSGDYLASSSNDCTAIIWKVQEDGKLTLkhTLSGHQRAVSFVAWSPDDTKLLTCGNIEVLKLWDVETGTCKHTFG-NDGFVVS 307
           68899***********************************99986577********************************************5.5999*** PP
   S: 185  slsfdsngkelvsgsld..gtvklwdlqtgecvrtlng 220
           s ++ +n++++v gs d  + + +wd+  +e +r+++g
   Q: 308  SCAWFPNSTQFVCGSFDpeKGICMWDCDGNE-LRAWRG 344
           ********9999998874467999*996444.565555 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MENNSSETLG SKGLINKHEF IRIILQSLYS LGYTKTASLL ESESGVSYKS NEFQLLESHV 60
LNGNWEACVT FLNSITEILG ESVESALFLV FRQTVMEYLK RGEDGLALDV LRKRVSALRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATGATGGC GATGGTGAGG TGGATAAGAA GCAGAAGACG ACCCACTCAG CAGATAACAA 60
TAAAACCGTC TTTTTAACAT AACACAGTGG GAACCAACCA ACGACCCAAA ACACAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

mtr:MTR_1g069345

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001381	Ailuropoda melanoleuca	37.81	1.00e-83	303.00
IUUC-Atr-003020	Amborella trichopoda	54.47	3.00e-156	544.00
IUUC-Apl-003200	Anas platyrhynchos	37.19	3.00e-80	291.00
IUUC-Aca-005122	Anolis carolinensis	38.63	2.00e-84	305.00
IUUC-Aly-005958	Arabidopsis lyrata	63.18	0.00e+00	666.00
IUUC-Ath-006873	Arabidopsis thaliana	64.34	0.00e+00	680.00
IUUC-Bta-012566	Bos taurus	37.35	2.00e-78	285.00
IUUC-Bdi-014476	Brachypodium distachyon	52.76	2.00e-149	521.00
IUUC-Bol-015916	Brassica oleracea	62.28	0.00e+00	672.00
IUUC-Bra-017911	Brassica rapa	61.97	0.00e+00	673.00
IUUC-Cja-019082	Callithrix jacchus	37.43	7.00e-83	300.00
IUUC-Cfa-020788	Canis familiaris	37.15	4.00e-78	284.00
IUUC-Cpo-022453	Cavia porcellus	37.33	1.00e-79	290.00
IUUC-Cho-024572	Choloepus hoffmanni	40.58	3.00e-57	215.00
IUUC-Cin-025474	Ciona intestinalis	40.71	4.00e-52	197.00
IUUC-Dre-027404	Danio rerio	38.28	2.00e-80	292.00
IUUC-Dno-029089	Dasypus novemcinctus	36.87	4.00e-82	298.00
IUUC-Dor-030714	Dipodomys ordii	36.12	3.00e-57	214.00
IUUC-Eca-033943	Equus caballus	37.43	1.00e-79	289.00
IUUC-Eeu-034468	Erinaceus europaeus	51.22	8.00e-34	137.00
IUUC-Fal-036639	Ficedula albicollis	36.69	6.00e-83	301.00
IUUC-Gmo-039395	Gadus morhua	40.10	8.00e-76	276.00
IUUC-Gga-040577	Gallus gallus	37.57	2.00e-83	302.00
IUUC-Gac-041352	Gasterosteus aculeatus	36.29	4.00e-81	295.00
IUUC-Gma-043704	Glycine max	77.00	0.00e+00	790.00
IUUC-Ggo-044684	Gorilla gorilla	37.43	7.00e-83	301.00
IUUC-Hsa-046838	Homo sapiens	37.43	7.00e-83	301.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	37.43	6.00e-83	301.00
IUUC-Lch-049848	Latimeria chalumnae	37.47	2.00e-67	249.00
IUUC-Loc-052708	Lepisosteus oculatus	38.60	2.00e-84	306.00
IUUC-Laf-054153	Loxodonta africana	37.24	9.00e-83	300.00
IUUC-Mcc-054742	Macaca mulatta	37.43	7.00e-83	301.00
IUUC-Mla-058912	Melampsora laricipopulina	37.30	1.00e-76	279.00
IUUC-Mga-059811	Meleagris gallopavo	34.00	3.00e-64	238.00
IUUC-Mmr-060823	Microcebus murinus	37.43	6.00e-83	301.00
IUUC-Mdo-062394	Monodelphis domestica	38.63	2.00e-84	306.00
IUUC-Mmu-063924	Mus musculus	37.24	9.00e-83	300.00
IUUC-Mpu-066858	Mustela putorius furo	36.70	6.00e-81	294.00
IUUC-Mlu-067659	Myotis lucifugus	37.43	9.00e-83	300.00
IUUC-Nle-069654	Nomascus leucogenys	37.15	4.00e-78	284.00
IUUC-Ocu-073812	Oryctolagus cuniculus	37.05	2.00e-80	292.00
IUUC-Obr-076019	Oryza brachyantha	50.79	3.00e-139	487.00
IUUC-Oga-088723	Otolemur garnettii	35.77	2.00e-76	279.00
IUUC-Oar-090125	Ovis aries	37.62	5.00e-83	301.00
IUUC-Ptr-090787	Pan troglodytes	37.15	4.00e-78	284.00
IUUC-Pan-092573	Papio anubis	35.18	9.00e-37	147.00
IUUC-Psi-093579	Pelodiscus sinensis	38.60	4.00e-79	288.00
IUUC-Pma-094254	Petromyzon marinus	43.55	3.00e-78	285.00
IUUC-Pab-098459	Pongo abelii	37.24	9.00e-81	293.00
IUUC-Pop-098968	Populus trichocarpa	78.70	2.00e-165	574.00
IUUC-Ppe-101881	Prunus persica	68.04	0.00e+00	718.00
IUUC-Pva-102404	Pteropus vampyrus	34.46	2.00e-66	246.00
IUUC-Rno-105335	Rattus norvegicus	37.40	2.00e-77	282.00
IUUC-Sha-106497	Sarcophilus harrisii	37.30	9.00e-80	290.00
IUUC-Stu-112587	Solanum tuberosum	60.57	1.00e-157	548.00
IUUC-Sar-113539	Sorex araneus	44.57	2.00e-38	152.00
IUUC-Ssc-115532	Sus scrofa	37.43	6.00e-83	301.00
IUUC-Tgu-116728	Taeniopygia guttata	37.74	1.00e-83	303.00
IUUC-Tru-118471	Takifugu rubripes	37.89	4.00e-87	315.00
IUUC-Tvi-122376	Trichoderma virens	34.20	5.00e-52	197.00
IUUC-Tae-124685	Triticum aestivum	53.12	1.00e-145	509.00
IUUC-Tbe-128063	Tupaia belangeri	24.34	1.00e-22	100.00
IUUC-Vpa-130400	Vicugna pacos	37.15	4.00e-77	281.00
IUUC-Vvi-131027	Vitis vinifera	68.43	0.00e+00	721.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence