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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105335
Ensembl Protein ID ENSRNOP00000005059.5
UniProt Accession F1LTR1; F1LTR1_RAT
Genbank Protein ID ENSRNOP00000005059
Protein Name WD repeat domain 26
Genbank Nucleotide ID AABR07021932
Gene Name Wdr26
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000003723.5 ENSRNOT00000005059.5 ENSRNOP00000005059.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACRAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.70e-29 100.4 464 495
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWD 29
           gHt  v+c+++    +  +++s+sdDgt+++W 
   Q: 464  GHTRTVNCVSWnpqiP-SMMASASDDGTVRIWG 495
           8**********95554.799************7 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MQKAGCRLEH PSATKFRNHV MEGDWDKAEN DLNELKPLVH SPHAIVVRGA LEISQTLLGI 60
IVRMKFLLLQ QKYLEYLEDG KVLEALQVLR CELTPLKYNT ERIHVLSGYL MCSHAEDLRA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105335|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGACTGTTG ATCTCCTCAT GCAAAAAGGC AGGATGTCGT TTAGAGCATC CTTCTGCTAC 60
CAAATTCCGA AATCATGTCA TGGAAGGAGA CTGGGATAAG GTAAAGTAGG GCGTAGAGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105335|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50897--CTLH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00668--CTLH
SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000905 Aegilops tauschii 37.75 7.00e-90 324.00
IUUC-Aml-001381 Ailuropoda melanoleuca 98.64 0.00e+00 978.00
IUUC-Atr-002649 Amborella trichopoda 37.75 1.00e-91 330.00
IUUC-Apl-003200 Anas platyrhynchos 94.76 0.00e+00 942.00
IUUC-Aca-005122 Anolis carolinensis 94.16 0.00e+00 935.00
IUUC-Aly-005958 Arabidopsis lyrata 41.82 4.00e-82 298.00
IUUC-Ath-007549 Arabidopsis thaliana 39.47 1.00e-79 290.00
IUUC-Ago-007896 Ashbya gossypii 35.11 4.00e-18 86.70
IUUC-Acl-008259 Aspergillus clavatus 37.45 5.00e-84 305.00
IUUC-Afl-008669 Aspergillus flavus 36.19 3.00e-77 283.00
IUUC-Afu-008972 Aspergillus fumigatus 38.18 5.00e-63 234.00
IUUC-Ani-009455 Aspergillus nidulans 31.68 3.00e-59 223.00
IUUC-Ang-009832 Aspergillus niger 35.57 9.00e-75 274.00
IUUC-Aor-010221 Aspergillus oryzae 37.48 1.00e-80 294.00
IUUC-Ate-010262 Aspergillus terreus 38.26 3.00e-86 313.00
IUUC-Ame-011448 Astyanax mexicanus 88.78 0.00e+00 890.00
IUUC-Bgr-012047 Blumeria graminis 37.43 2.00e-79 290.00
IUUC-Bta-012566 Bos taurus 98.64 0.00e+00 977.00
IUUC-Bci-013589 Botrytis cinerea 34.39 2.00e-71 263.00
IUUC-Bdi-014338 Brachypodium distachyon 37.95 1.00e-90 327.00
IUUC-Bol-015916 Brassica oleracea 40.04 3.00e-81 296.00
IUUC-Bra-017911 Brassica rapa 40.45 9.00e-82 298.00
IUUC-Cel-018613 Caenorhabditis elegans 26.15 9.00e-33 135.00
IUUC-Cja-019082 Callithrix jacchus 98.83 0.00e+00 980.00
IUUC-Cfa-020788 Canis familiaris 98.83 0.00e+00 979.00
IUUC-Cpo-022453 Cavia porcellus 98.25 0.00e+00 974.00
IUUC-Csa-023815 Chlorocebus sabaeus 94.83 0.00e+00 792.00
IUUC-Cho-024572 Choloepus hoffmanni 86.58 2.00e-154 538.00
IUUC-Cin-025474 Ciona intestinalis 67.15 1.00e-114 405.00
IUUC-Csv-026251 Ciona savignyi 57.43 9.00e-172 596.00
IUUC-Cgl-026607 Colletotrichum gloeosporioides 37.73 7.00e-79 288.00
IUUC-Cne-026805 Cryptococcus neoformans 31.95 6.00e-43 169.00
IUUC-Cme-027218 Cyanidioschyzon merolae 27.41 3.00e-40 160.00
IUUC-Dre-027404 Danio rerio 88.59 0.00e+00 855.00
IUUC-Dno-029089 Dasypus novemcinctus 94.10 0.00e+00 941.00
IUUC-Dor-030714 Dipodomys ordii 86.21 0.00e+00 714.00
IUUC-Dse-031569 Dothistroma septosporum 33.69 3.00e-70 259.00
IUUC-Dme-032077 Drosophila melanogaster 56.80 6.00e-169 587.00
IUUC-Ete-032986 Echinops telfairi 73.31 5.00e-123 434.00
IUUC-Eca-033943 Equus caballus 98.83 0.00e+00 981.00
IUUC-Eeu-034468 Erinaceus europaeus 68.85 1.00e-122 432.00
IUUC-Fca-036556 Felis catus 93.92 0.00e+00 929.00
IUUC-Fal-036639 Ficedula albicollis 92.02 0.00e+00 925.00
IUUC-Fox-037720 Fusarium oxysporum 37.18 6.00e-78 285.00
IUUC-Fso-038206 Fusarium solani 35.46 1.00e-75 277.00
IUUC-Gmo-039395 Gadus morhua 86.64 0.00e+00 858.00
IUUC-Ggr-039738 Gaeumannomyces graminis 35.83 5.00e-75 275.00
IUUC-Gga-040577 Gallus gallus 94.88 0.00e+00 931.00
IUUC-Gac-041352 Gasterosteus aculeatus 88.25 0.00e+00 891.00
IUUC-Gma-043704 Glycine max 37.24 4.00e-84 305.00
IUUC-Ggo-044684 Gorilla gorilla 98.83 0.00e+00 982.00
IUUC-Hsa-046838 Homo sapiens 98.83 0.00e+00 982.00
IUUC-Hvu-047226 Hordeum vulgare 37.35 9.00e-87 314.00
IUUC-Itr-048020 Ictidomys tridecemlineatus 98.83 0.00e+00 981.00
IUUC-Kpa-049141 Komagataella pastoris 28.54 1.00e-43 171.00
IUUC-Lch-049848 Latimeria chalumnae 87.87 0.00e+00 776.00
IUUC-Lpe-050963 Leersia perrieri 39.16 4.00e-97 348.00
IUUC-Loc-052708 Lepisosteus oculatus 91.14 0.00e+00 896.00
IUUC-Lma-053156 Leptosphaeria maculans 33.77 4.00e-73 269.00
IUUC-Laf-054153 Loxodonta africana 97.86 0.00e+00 976.00
IUUC-Mcc-054742 Macaca mulatta 98.83 0.00e+00 982.00
IUUC-Meu-056633 Macropus eugenii 83.44 3.00e-132 465.00
IUUC-Mor-056939 Magnaporthe oryzae 38.76 4.00e-83 301.00
IUUC-Mpo-057600 Magnaporthe poae 35.45 1.00e-73 271.00
IUUC-Mtr-058724 Medicago truncatula 37.50 2.00e-83 302.00
IUUC-Mla-058912 Melampsora laricipopulina 40.77 3.00e-86 311.00
IUUC-Mga-059811 Meleagris gallopavo 91.68 0.00e+00 833.00
IUUC-Mvi-060274 Microbotryum violaceum 34.85 1.00e-82 301.00
IUUC-Mmr-060823 Microcebus murinus 98.44 0.00e+00 974.00
IUUC-Mdo-062394 Monodelphis domestica 94.55 0.00e+00 935.00
IUUC-Mmu-063924 Mus musculus 98.83 0.00e+00 983.00
IUUC-Mac-065563 Musa acuminata 38.96 7.00e-92 332.00
IUUC-Mpu-066858 Mustela putorius furo 94.46 0.00e+00 936.00
IUUC-Mlu-067659 Myotis lucifugus 98.64 0.00e+00 979.00
IUUC-Nfi-068498 Neosartorya fischeri 38.12 2.00e-84 306.00
IUUC-Ncr-068832 Neurospora crassa 37.35 1.00e-73 271.00
IUUC-Nle-069654 Nomascus leucogenys 98.83 0.00e+00 979.00
IUUC-Opr-071198 Ochotona princeps 75.67 4.00e-144 504.00
IUUC-Ont-071547 Oreochromis niloticus 88.78 0.00e+00 886.00
IUUC-Oan-073045 Ornithorhynchus anatinus 91.71 0.00e+00 908.00
IUUC-Ocu-073812 Oryctolagus cuniculus 98.44 0.00e+00 956.00
IUUC-Oba-075071 Oryza barthii 38.55 1.00e-96 347.00
IUUC-Obr-076614 Oryza brachyantha 38.88 1.00e-96 347.00
IUUC-Ogl-076963 Oryza glaberrima 38.55 1.00e-96 347.00
IUUC-Ogu-078436 Oryza glumaepatula 38.55 1.00e-96 347.00
IUUC-Oin-080021 Oryza indica 38.76 2.00e-96 346.00
IUUC-Olo-080298 Oryza longistaminata 38.55 4.00e-96 345.00
IUUC-Ome-081202 Oryza meridionalis 38.76 3.00e-96 345.00
IUUC-Oni-082604 Oryza nivara 38.76 2.00e-96 346.00
IUUC-Opu-083763 Oryza punctata 38.76 2.00e-96 346.00
IUUC-Oru-084243 Oryza rufipogon 38.76 2.00e-96 346.00
IUUC-Osa-086153 Oryza sativa 36.26 2.00e-77 283.00
IUUC-Ola-086670 Oryzias latipes 88.01 0.00e+00 891.00
IUUC-Oga-088723 Otolemur garnettii 89.10 0.00e+00 862.00
IUUC-Oar-090125 Ovis aries 98.64 0.00e+00 978.00
IUUC-Ptr-090787 Pan troglodytes 98.83 0.00e+00 979.00
IUUC-Pan-092573 Papio anubis 96.90 4.00e-144 504.00
IUUC-Psi-093579 Pelodiscus sinensis 94.36 0.00e+00 930.00
IUUC-Pma-094254 Petromyzon marinus 83.59 0.00e+00 691.00
IUUC-Pno-094912 Phaeosphaeria nodorum 34.50 5.00e-74 272.00
IUUC-Ppa-095307 Physcomitrella patens 44.09 6.00e-101 361.00
IUUC-Pfo-096394 Poecilia formosa 88.78 0.00e+00 887.00
IUUC-Pab-098459 Pongo abelii 98.64 0.00e+00 974.00
IUUC-Pop-099989 Populus trichocarpa 36.67 1.00e-81 296.00
IUUC-Pca-100574 Procavia capensis 99.12 8.00e-138 483.00
IUUC-Ppe-101881 Prunus persica 38.11 6.00e-81 294.00
IUUC-Pva-102404 Pteropus vampyrus 93.97 0.00e+00 912.00
IUUC-Pgr-103411 Puccinia graminis 29.82 3.00e-27 117.00
IUUC-Ptt-103705 Puccinia triticina 26.30 1.00e-44 174.00
IUUC-Pte-104023 Pyrenophora teres 35.70 2.00e-78 286.00
IUUC-Pyt-104759 Pyrenophora triticirepentis 35.26 1.00e-75 278.00
IUUC-Sce-106152 Saccharomyces cerevisiae 33.61 2.00e-15 77.40
IUUC-Sha-106497 Sarcophilus harrisii 97.67 0.00e+00 972.00
IUUC-Sja-107894 Schizosaccharomyces japonicus 31.79 9.00e-62 231.00
IUUC-Spo-108235 Schizosaccharomyces pombe 32.34 1.00e-63 237.00
IUUC-Smo-109054 Selaginella moellendorffii 42.08 8.00e-106 377.00
IUUC-Sit-110575 Setaria italica 39.08 4.00e-97 348.00
IUUC-Sly-111167 Solanum lycopersicum 38.72 2.00e-89 323.00
IUUC-Stu-112726 Solanum tuberosum 36.75 1.00e-83 303.00
IUUC-Sar-113539 Sorex araneus 98.32 3.00e-120 425.00
IUUC-Sbi-114344 Sorghum bicolor 38.88 1.00e-95 343.00
IUUC-Sre-115051 Sporisorium reilianum 29.03 6.00e-61 228.00
IUUC-Ssc-115532 Sus scrofa 98.83 0.00e+00 982.00
IUUC-Tgu-116728 Taeniopygia guttata 95.15 0.00e+00 951.00
IUUC-Tru-118358 Takifugu rubripes 86.37 0.00e+00 854.00
IUUC-Tsy-119284 Tarsius syrichta 89.72 0.00e+00 868.00
IUUC-Tni-119720 Tetraodon nigroviridis 86.81 0.00e+00 860.00
IUUC-Tca-121103 Theobroma cacao 34.97 2.00e-80 293.00
IUUC-Tre-122234 Trichoderma reesei 36.56 3.00e-72 266.00
IUUC-Tvi-122376 Trichoderma virens 34.76 7.00e-45 174.00
IUUC-Tae-125635 Triticum aestivum 38.35 1.00e-91 330.00
IUUC-Tur-126726 Triticum urartu 36.35 3.00e-91 329.00
IUUC-Tme-126972 Tuber melanosporum 40.90 2.00e-96 347.00
IUUC-Tbe-128063 Tupaia belangeri 77.25 4.00e-170 590.00
IUUC-Ttr-129184 Tursiops truncatus 92.61 0.00e+00 903.00
IUUC-Uma-129354 Ustilago maydis 31.33 1.00e-45 178.00
IUUC-Vda-129770 Verticillium dahliae 34.60 8.00e-71 261.00
IUUC-Vpa-130400 Vicugna pacos 98.64 0.00e+00 972.00
IUUC-Vvi-130991 Vitis vinifera 36.55 3.00e-80 292.00
IUUC-Xtr-132619 Xenopus tropicalis 90.21 0.00e+00 904.00
IUUC-Xma-134128 Xiphophorus maculatus 88.78 0.00e+00 889.00
IUUC-Yli-134521 Yarrowia lipolytica 33.20 9.00e-57 214.00
IUUC-Zma-135772 Zea mays 38.68 2.00e-89 323.00
Created Date 25-Jun-2017

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