• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Mdo-062016
UUCD1 version UUC-MoD-00744
Ensembl Protein ID ENSMODP00000016719.3
UniProt Accession F7DTG4; F7DTG4_MONDO
Protein Name E3 ubiquitin-protein ligase RNF8; RING finger protein 8; RING-type E3 ubiquitin transferase RNF8
Gene Name RNF8
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMODG00000013447.3 ENSMODT00000017029.3 ENSMODP00000016719.3
ENSMODG00000013447.3 ENSMODT00000017132.3 ENSMODP00000016820.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.70e-06 28.6 853 891
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
    C+iC e+f + ++l+C H f+ C+ w +++ CP+Cr
   Q: 853 CIICSEHFIE-AVTLNCAHSFCSYCIDEW------MKRKVECPICR 891
    ********99.899***************......**********8 PP
   

Organism Monodelphis domestica
Functional Description
(View)

Functional Description



     E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53BP1 and BRCA1 ionizing radiation-induced foci (IRIF). Also controls the recruitment of UIMC1-BRCC3 (RAP80-BRCC36) and PAXIP1/PTIP to DNA damage sites. Also recruited at DNA interstrand cross-links (ICLs) sites and catalyzes 'Lys-63'-linked ubiquitination of histones H2A and H2AX, leading to recruitment of FAAP20 and Fanconi anemia (FA) complex, followed by interstrand cross-link repair. H2A ubiquitination also mediates the ATM-dependent transcriptional silencing at regions flanking DSBs in cis, a mechanism to avoid collision between transcription and repair intermediates. Promotes the formation of 'Lys-63'-linked polyubiquitin chains via interactions with the specific ubiquitin-conjugating UBE2N/UBC13 and ubiquitinates non-histone substrates such as PCNA. Substrates that are polyubiquitinated at 'Lys-63' are usually not targeted for degradation. Also catalyzes the formation of 'Lys-48'-linked polyubiquitin chains via interaction with the ubiquitin-conjugating UBE2L6/UBCH8, leading to degradation of substrate proteins such as CHEK2, JMJD2A/KDM4A and KU80/XRCC5: it is still unclear how the preference toward 'Lys-48'- versus 'Lys-63'-linked ubiquitination is regulated but it could be due to RNF8 ability to interact with specific E2 specific ligases. For instance, interaction with phosphorylated HERC2 promotes the association between RNF8 and UBE2N/UBC13 and favors the specific formation of 'Lys-63'-linked ubiquitin chains. Promotes non-homologous end joining (NHEJ) by promoting the 'Lys-48'-linked ubiquitination and degradation the of KU80/XRCC5. Following DNA damage, mediates the ubiquitination and degradation of JMJD2A/KDM4A in collaboration with RNF168, leading to unmask H4K20me2 mark and promote the recruitment of TP53BP1 at DNA damage sites. In addition to its function in damage signaling, also plays a role in higher-order chromatin structure by mediating extensive chromatin decondensation. Involved in the activation of ATM by promoting histone H2B ubiquitination, which indirectly triggers histone H4 'Lys-16' acetylation (H4K16ac), establishing a chromatin environment that promotes efficient activation of ATM kinase. Required in the testis, where it plays a role in the replacement of histones during spermatogenesis. At uncapped telomeres, promotes the joining of deprotected chromosome ends by inducing H2A ubiquitination and TP53BP1 recruitment, suggesting that it may enhance cancer development by aggravating telomere-induced genome instability in case of telomeric crisis. Promotes the assembly of RAD51 at DNA DSBs in the absence of BRCA1 and TP53BP1 Also involved in class switch recombination in immune system, via its role in regulation of DSBs repair. May be required for proper exit from mitosis after spindle checkpoint activation and may regulate cytokinesis. May play a role in the regulation of RXRA-mediated transcriptional activity. Not involved in RXRA ubiquitination by UBE2E2.
E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53BP1 and BRCA1 ionizing radiation-induced foci (IRIF). Also controls the recruitment of UIMC1-BRCC3 (RAP80-BRCC36) and PAXIP1/PTIP to DNA damage sites. Also recruited at DNA interstrand cross-links (ICLs) sites and catalyzes 'Lys-63'-linked ubiquitination of histones H2A and H2AX, leading to recruitment of FAAP20 and Fanconi anemia (FA) complex, followed by interstrand cross-link repair. H2A ubiquitination also mediates the ATM-dependent transcriptional silencing at regions flanking DSBs in cis, a mechanism to avoid collision between transcription and repair intermediates. Promotes the formation of 'Lys-63'-linked polyubiquitin chains via interactions with the specific ubiquitin-conjugating UBE2N/UBC13 and ubiquitinates non-histone substrates such as PCNA. Substrates that are polyubiquitinated at 'Lys-63' are usually not targeted for degradation. Also catalyzes the formation of 'Lys-48'-linked polyubiquitin chains via interaction with the ubiquitin-conjugating UBE2L6/UBCH8, leading to degradation of substrate proteins such as CHEK2, JMJD2A/KDM4A and KU80/XRCC5: it is still unclear how the preference toward 'Lys-48'- versus 'Lys-63'-linked ubiquitination is regulated but it could be due to RNF8 ability to interact with specific E2 specific ligases. For instance, interaction with phosphorylated HERC2 promotes the association between RNF8 and UBE2N/UBC13 and favors the specific formation of 'Lys-63'-linked ubiquitin chains. Promotes non-homologous end joining (NHEJ) by promoting the 'Lys-48'-linked ubiquitination and degradation the of KU80/XRCC5. Following DNA damage, mediates the ubiquitination and degradation of JMJD2A/KDM4A in collaboration with RNF168, leading to unmask H4K20me2 mark and promote the recruitment of TP53BP1 at DNA damage sites. In addition to its function in damage signaling, also plays a role in higher-order chromatin structure by mediating extensive chromatin decondensation. Involved in the activation of ATM by promoting histone H2B ubiquitination, which indirectly triggers histone H4 'Lys-16' acetylation (H4K16ac), establishing a chromatin environment that promotes efficient activation of ATM kinase. Required in the testis, where it plays a role in the replacement of histones during spermatogenesis. At uncapped telomeres, promotes the joining of deprotected chromosome ends by inducing H2A ubiquitination and TP53BP1 recruitment, suggesting that it may enhance cancer development by aggravating telomere-induced genome instability in case of telomeric crisis. Promotes the assembly of RAD51 at DNA DSBs in the absence of BRCA1 and TP53BP1 Also involved in class switch recombination in immune system, via its role in regulation of DSBs repair. May be required for proper exit from mitosis after spindle checkpoint activation and may regulate cytokinesis. May play a role in the regulation of RXRA-mediated transcriptional activity. Not involved in RXRA ubiquitination by UBE2E2.
Protein Sequence
(Fasta)
MILKYKIQKK HKKVCFFSET LEMKKFYSVI CAFLCQDFIT SNSIQPVYGA QHPPLDPRLT 60
KNFIKERSKV NAVSLKNKKA SSFHEFARNT SDAWDIGDDE DEDFSTSSFQ TLNSKVALAT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mdo-062016|E3,RING|Monodelphis domestica
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGATTCTCA AATACAAGAT TCAAAAGAAA CATAAAAAGG TAAATGAAAA AGAGAAATAA 60
AGACATTCAA TAAGGTTAAA CTGTTTATTT ACATGCCTAT ATGGGAAGAT GGTTGTTGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mdo-062016|E3,RING|Monodelphis domestica
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0156--Chromatin regulator
KW-0158--Chromosome
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0479--Metal-binding
KW-0498--Mitosis
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0779--Telomere
KW-0808--Transferase
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR030376--Cap_mRNA_MeTrfase_1
IPR000253--FHA_dom
IPR000467--G_patch_dom
IPR000195--Rab-GTPase-TBC_dom
IPR017335--RNF8
IPR025816--RrmJ-type_MeTrfase
IPR002877--rRNA_MeTrfase_FtsJ_dom
IPR029063--SAM-dependent_MTases
IPR008984--SMAD_FHA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50006--FHA_DOMAIN
PS50174--G_PATCH
PS51613--SAM_MT_RRMJ
PS50086--TBC_RABGAP
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00498--FHA
PF01728--FtsJ
PF01585--G-patch
PF00566--RabGAP-TBC

SMART

SM00240--FHA
SM00443--G_patch
SM00184--RING
SM00164--TBC

Gene Ontology

GO:0012505--C:endomembrane system
GO:0005622--C:intracellular
GO:0005096--F:GTPase activator activity
GO:0004483--F:mRNA (nucleoside-2'-O-)-methyltransferase activity
GO:0003676--F:nucleic acid binding
GO:0017137--F:Rab GTPase binding
GO:0008270--F:zinc ion binding
GO:0006370--P:7-methylguanosine mRNA capping
GO:0090630--P:activation of GTPase activity
GO:0006886--P:intracellular protein transport
GO:0031338--P:regulation of vesicle fusion

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002124 Ailuropoda melanoleuca 67.78 1.00e-122 432.00
IUUC-Apl-003664 Anas platyrhynchos 82.02 2.00e-39 154.00
IUUC-Aca-005036 Anolis carolinensis 61.61 3.00e-117 415.00
IUUC-Ago-007705 Ashbya gossypii 43.86 2.00e-07 50.80
IUUC-Ame-011537 Astyanax mexicanus 42.67 1.00e-78 286.00
IUUC-Bta-013297 Bos taurus 67.11 1.00e-117 416.00
IUUC-Cja-019201 Callithrix jacchus 67.24 1.00e-135 476.00
IUUC-Cfa-021041 Canis familiaris 69.54 7.00e-139 487.00
IUUC-Csa-024133 Chlorocebus sabaeus 67.25 2.00e-137 482.00
IUUC-Cho-024624 Choloepus hoffmanni 60.95 8.00e-86 310.00
IUUC-Dre-027918 Danio rerio 43.58 2.00e-76 280.00
IUUC-Dno-029774 Dasypus novemcinctus 70.64 2.00e-144 505.00
IUUC-Dor-030190 Dipodomys ordii 57.53 6.00e-96 344.00
IUUC-Ete-032301 Echinops telfairi 62.44 2.00e-106 379.00
IUUC-Eca-033607 Equus caballus 69.64 3.00e-125 441.00
IUUC-Eeu-034888 Erinaceus europaeus 68.12 1.00e-87 317.00
IUUC-Fca-036075 Felis catus 66.45 2.00e-135 475.00
IUUC-Fal-037569 Ficedula albicollis 68.15 1.00e-132 466.00
IUUC-Fox-037681 Fusarium oxysporum 39.68 6.00e-07 49.30
IUUC-Gmo-038588 Gadus morhua 38.36 5.00e-67 248.00
IUUC-Gga-040777 Gallus gallus 68.23 2.00e-133 468.00
IUUC-Gac-042463 Gasterosteus aculeatus 42.13 1.00e-56 214.00
IUUC-Ggo-045269 Gorilla gorilla 67.77 2.00e-138 485.00
IUUC-Hsa-046249 Homo sapiens 67.55 2.00e-132 465.00
IUUC-Itr-048314 Ictidomys tridecemlineatus 67.18 1.00e-132 466.00
IUUC-Lch-049805 Latimeria chalumnae 51.91 6.00e-105 374.00
IUUC-Loc-052377 Lepisosteus oculatus 49.22 1.00e-83 303.00
IUUC-Mcc-055344 Macaca mulatta 67.77 2.00e-138 485.00
IUUC-Meu-055950 Macropus eugenii 83.98 5.00e-171 593.00
IUUC-Mor-057012 Magnaporthe oryzae 39.68 3.00e-07 50.40
IUUC-Mla-059052 Melampsora laricipopulina 40.98 8.00e-10 57.00
IUUC-Mga-060049 Meleagris gallopavo 66.96 7.00e-130 457.00
IUUC-Mmr-061431 Microcebus murinus 68.43 3.00e-127 448.00
IUUC-Mmu-063368 Mus musculus 68.30 0.00e+00 845.00
IUUC-Mpu-066449 Mustela putorius furo 70.48 8.00e-145 506.00
IUUC-Mlu-067588 Myotis lucifugus 64.90 2.00e-120 425.00
IUUC-Nle-069192 Nomascus leucogenys 67.77 9.00e-138 483.00
IUUC-Opr-070300 Ochotona princeps 54.77 2.00e-100 359.00
IUUC-Ont-071998 Oreochromis niloticus 43.61 2.00e-62 233.00
IUUC-Oan-073610 Ornithorhynchus anatinus 70.74 1.00e-69 255.00
IUUC-Ocu-074603 Oryctolagus cuniculus 64.71 4.00e-125 441.00
IUUC-Ola-086681 Oryzias latipes 42.80 2.00e-72 266.00
IUUC-Oga-088183 Otolemur garnettii 67.33 2.00e-134 472.00
IUUC-Oar-090255 Ovis aries 67.42 3.00e-117 414.00
IUUC-Ptr-091029 Pan troglodytes 68.61 1.00e-137 482.00
IUUC-Pan-092241 Papio anubis 67.77 1.00e-138 486.00
IUUC-Psi-093506 Pelodiscus sinensis 68.87 3.00e-128 452.00
IUUC-Pma-094579 Petromyzon marinus 58.16 2.00e-27 117.00
IUUC-Pfo-097014 Poecilia formosa 43.74 1.00e-61 230.00
IUUC-Pab-098530 Pongo abelii 66.67 8.00e-136 476.00
IUUC-Pca-100939 Procavia capensis 54.23 6.00e-82 298.00
IUUC-Pva-103148 Pteropus vampyrus 60.93 3.00e-117 415.00
IUUC-Rno-105338 Rattus norvegicus 64.67 1.00e-140 493.00
IUUC-Sce-106402 Saccharomyces cerevisiae 34.48 5.00e-08 52.80
IUUC-Sha-107187 Sarcophilus harrisii 90.02 2.00e-159 555.00
IUUC-Sja-107948 Schizosaccharomyces japonicus 25.25 2.00e-10 60.10
IUUC-Sar-113356 Sorex araneus 56.31 8.00e-99 353.00
IUUC-Ssc-116290 Sus scrofa 67.99 2.00e-151 528.00
IUUC-Tru-117910 Takifugu rubripes 43.68 3.00e-60 226.00
IUUC-Tsy-119329 Tarsius syrichta 64.27 7.00e-122 430.00
IUUC-Tni-120521 Tetraodon nigroviridis 42.48 8.00e-61 228.00
IUUC-Tme-126989 Tuber melanosporum 30.99 5.00e-07 49.70
IUUC-Ttr-128997 Tursiops truncatus 61.80 1.00e-127 449.00
IUUC-Vda-130024 Verticillium dahliae 39.68 1.00e-06 48.50
IUUC-Vpa-130154 Vicugna pacos 64.85 1.00e-132 466.00
IUUC-Xtr-132805 Xenopus tropicalis 53.01 5.00e-99 354.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved