iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068334

Ensembl Protein ID

CADNFIAP00004221

UniProt Accession

A1DMD1; A1DMD1_NEOFI

Genbank Protein ID

EAW15952.1

Protein Name

mRNA splicing factor (Prp17), putative

Genbank Nucleotide ID

DS027698

Gene Name

NFIA_052980

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00004349	CADNFIAT00004349	CADNFIAP00004221

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-27	92.6	328	365
UBD/Beta-Prp	4.70e-47	159.7	276	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  +t+ +f ++ ++++++s+D ++k+WD+  g+++
   Q: 328  GHSKAITDTDFhPSgKTFLTASYDRQMKLWDTEYGKCI 365
           8***********66699***************999986 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
            k +ht+k h++ ++sl+f+p sg+ l+s  +d  +++wd+ +  +l  t+sgh+++++ + +hp+g+ + ++s+Dr+++lWd + gk++ ++
   Q: 276  KKLIHTWKSHTKAITSLRFFPnSGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFHPSGKTFLTASYDRQMKLWDTEYGKCIARF 368
           689******************566*********************9999******************************************** PP
   S: 176  tgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssv 267
           + g+t+ v   +   + + e+++g  d+++  +d ++ge v+++  h + ++ + f +++ r++s+s+D+s+r W +    ++k ++ +    
   Q: 369  STGKTPHVLRFNpGADHSHEFLAGMSDKKIVQFDTRSGELVQEYDHHLAAINTITFVDENRRFISTSDDKSLRAWEYGIPVPIKFIAEPYMFA 461
           8878888877776444469********************************************************999999999999999777 PP
   S: 268  isvavlsfgdnvlvlgsedskvniwk 293
              a+ ++++++++  s+d+++ ++ 
   Q: 462  LTRAAPHPNGKYVAFQSGDNQIVVYG 487
           77777799999999999999999986 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MASLLGADYN SSDDDATTPQ VATATPATKV VAAPEVNTED PVHMQMMLAN TTSNALTYNA 60
TYDDLARPSQ GPANPFKPAG SASGLKRKNV PTGFAEEASI SEATFAAQHR TFQSLGYTRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCAT TATTAGGTGC CGACTACAAC TCCAGCGACG ATGACGCCAC AACGCCCCAG 60
GTCGCAACGG CGACCCCAGC CACCAAGGTC GTTGCTGCGC CCGAAGTGAA CACAGAGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

nfi:NFIA_052980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	41.83	1.00e-115	408.00
IUUC-Aml-002243	Ailuropoda melanoleuca	41.78	2.00e-92	331.00
IUUC-Atr-002502	Amborella trichopoda	40.73	4.00e-117	413.00
IUUC-Apl-003885	Anas platyrhynchos	44.98	4.00e-131	459.00
IUUC-Aca-004854	Anolis carolinensis	32.64	3.00e-77	280.00
IUUC-Aly-006158	Arabidopsis lyrata	51.45	8.00e-111	392.00
IUUC-Ath-007474	Arabidopsis thaliana	51.45	2.00e-110	391.00
IUUC-Ago-007726	Ashbya gossypii	41.34	6.00e-74	269.00
IUUC-Acl-008220	Aspergillus clavatus	92.10	0.00e+00	1094.00
IUUC-Afl-008473	Aspergillus flavus	86.43	0.00e+00	1038.00
IUUC-Afu-008773	Aspergillus fumigatus	97.93	0.00e+00	1143.00
IUUC-Ani-009323	Aspergillus nidulans	81.24	0.00e+00	867.00
IUUC-Ang-009851	Aspergillus niger	85.42	0.00e+00	1029.00
IUUC-Aor-009950	Aspergillus oryzae	86.43	0.00e+00	1038.00
IUUC-Ate-010372	Aspergillus terreus	86.57	0.00e+00	1030.00
IUUC-Ame-011660	Astyanax mexicanus	44.56	1.00e-135	474.00
IUUC-Bgr-012230	Blumeria graminis	58.85	0.00e+00	626.00
IUUC-Bta-012568	Bos taurus	43.37	2.00e-133	467.00
IUUC-Bci-013646	Botrytis cinerea	61.30	0.00e+00	625.00
IUUC-Bdi-014199	Brachypodium distachyon	42.31	5.00e-118	416.00
IUUC-Bol-015695	Brassica oleracea	52.02	2.00e-111	394.00
IUUC-Bra-017923	Brassica rapa	43.21	5.00e-124	436.00
IUUC-Cel-018535	Caenorhabditis elegans	38.23	1.00e-116	411.00
IUUC-Cja-019071	Callithrix jacchus	43.59	1.00e-132	465.00
IUUC-Cfa-020559	Canis familiaris	43.65	2.00e-133	468.00
IUUC-Cpo-022356	Cavia porcellus	44.15	2.00e-133	468.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	37.14	6.00e-61	225.00
IUUC-Csa-023125	Chlorocebus sabaeus	43.59	6.00e-133	466.00
IUUC-Cho-024676	Choloepus hoffmanni	46.35	2.00e-122	430.00
IUUC-Cin-025229	Ciona intestinalis	44.84	6.00e-129	452.00
IUUC-Csv-025868	Ciona savignyi	57.78	4.00e-31	124.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	57.47	2.00e-168	583.00
IUUC-Cne-026885	Cryptococcus neoformans	44.62	6.00e-133	466.00
IUUC-Dre-027631	Danio rerio	43.21	1.00e-134	471.00
IUUC-Dno-029815	Dasypus novemcinctus	41.35	5.00e-124	436.00
IUUC-Dor-030978	Dipodomys ordii	43.74	6.00e-112	395.00
IUUC-Dse-031520	Dothistroma septosporum	51.14	5.00e-150	522.00
IUUC-Dme-032050	Drosophila melanogaster	42.09	1.00e-123	434.00
IUUC-Ete-032866	Echinops telfairi	43.59	2.00e-130	457.00
IUUC-Eca-033384	Equus caballus	43.76	1.00e-131	461.00
IUUC-Eeu-034471	Erinaceus europaeus	35.92	1.00e-91	328.00
IUUC-Fca-035727	Felis catus	43.47	1.00e-133	468.00
IUUC-Fal-036774	Ficedula albicollis	45.62	2.00e-135	473.00
IUUC-Fox-037951	Fusarium oxysporum	60.19	0.00e+00	630.00
IUUC-Fso-038287	Fusarium solani	59.27	4.00e-179	619.00
IUUC-Gmo-039670	Gadus morhua	42.44	3.00e-133	467.00
IUUC-Ggr-039764	Gaeumannomyces graminis	57.89	1.00e-175	607.00
IUUC-Gga-040293	Gallus gallus	45.23	8.00e-134	468.00
IUUC-Gac-042159	Gasterosteus aculeatus	42.71	4.00e-135	473.00
IUUC-Gma-044299	Glycine max	52.03	2.00e-109	387.00
IUUC-Ggo-044864	Gorilla gorilla	43.79	6.00e-133	465.00
IUUC-Hsa-046602	Homo sapiens	43.79	6.00e-133	465.00
IUUC-Hvu-047431	Hordeum vulgare	27.07	1.00e-31	128.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	49.29	3.00e-119	419.00
IUUC-Kpa-049318	Komagataella pastoris	40.65	7.00e-101	359.00
IUUC-Lch-049796	Latimeria chalumnae	39.69	2.00e-108	384.00
IUUC-Lpe-051153	Leersia perrieri	42.67	2.00e-117	414.00
IUUC-Loc-052467	Lepisosteus oculatus	44.25	7.00e-139	485.00
IUUC-Lma-053107	Leptosphaeria maculans	57.82	1.00e-165	574.00
IUUC-Laf-053787	Loxodonta africana	43.16	7.00e-134	469.00
IUUC-Mcc-055706	Macaca mulatta	43.59	8.00e-133	465.00
IUUC-Meu-056757	Macropus eugenii	52.51	2.00e-99	355.00
IUUC-Mor-057079	Magnaporthe oryzae	57.12	2.00e-174	603.00
IUUC-Mpo-057533	Magnaporthe poae	62.05	6.00e-163	565.00
IUUC-Mtr-057950	Medicago truncatula	51.30	2.00e-109	387.00
IUUC-Mla-058910	Melampsora laricipopulina	39.77	4.00e-120	423.00
IUUC-Mga-059366	Meleagris gallopavo	45.23	1.00e-133	468.00
IUUC-Mvi-060349	Microbotryum violaceum	39.87	1.00e-124	438.00
IUUC-Mmr-061209	Microcebus murinus	43.94	4.00e-135	473.00
IUUC-Mdo-062118	Monodelphis domestica	44.74	4.00e-137	479.00
IUUC-Mmu-063173	Mus musculus	43.55	6.00e-133	466.00
IUUC-Mac-065080	Musa acuminata	42.34	7.00e-121	426.00
IUUC-Mpu-066659	Mustela putorius furo	43.65	1.00e-133	468.00
IUUC-Mlu-067029	Myotis lucifugus	45.32	8.00e-133	465.00
IUUC-Ncr-068675	Neurospora crassa	54.21	5.00e-158	549.00
IUUC-Nle-070113	Nomascus leucogenys	43.38	2.00e-132	464.00
IUUC-Opr-070685	Ochotona princeps	54.08	3.00e-118	417.00
IUUC-Ont-071680	Oreochromis niloticus	44.46	2.00e-136	477.00
IUUC-Oan-073573	Ornithorhynchus anatinus	45.40	4.00e-126	442.00
IUUC-Ocu-074074	Oryctolagus cuniculus	43.94	3.00e-135	473.00
IUUC-Oba-075625	Oryza barthii	42.69	4.00e-117	413.00
IUUC-Obr-076510	Oryza brachyantha	42.69	2.00e-116	410.00
IUUC-Ogl-077275	Oryza glaberrima	42.69	4.00e-117	413.00
IUUC-Ogu-078563	Oryza glumaepatula	42.69	4.00e-117	413.00
IUUC-Oin-079898	Oryza indica	51.01	3.00e-109	387.00
IUUC-Olo-081080	Oryza longistaminata	43.16	2.00e-115	407.00
IUUC-Ome-081794	Oryza meridionalis	28.98	1.00e-25	108.00
IUUC-Oni-083121	Oryza nivara	42.69	4.00e-117	413.00
IUUC-Opu-083329	Oryza punctata	42.97	2.00e-117	414.00
IUUC-Oru-084807	Oryza rufipogon	42.56	3.00e-103	367.00
IUUC-Osa-086039	Oryza sativa	42.80	9.00e-118	415.00
IUUC-Ola-087149	Oryzias latipes	43.79	3.00e-135	473.00
IUUC-Olu-087627	Ostreococcus lucimarinus	36.04	3.00e-93	333.00
IUUC-Oga-088359	Otolemur garnettii	43.59	6.00e-133	466.00
IUUC-Oar-089390	Ovis aries	43.97	9.00e-133	465.00
IUUC-Ptr-090894	Pan troglodytes	43.79	6.00e-133	465.00
IUUC-Pan-092476	Papio anubis	43.59	8.00e-133	465.00
IUUC-Psi-093527	Pelodiscus sinensis	44.55	4.00e-127	446.00
IUUC-Pno-094771	Phaeosphaeria nodorum	58.30	8.00e-166	574.00
IUUC-Ppa-095386	Physcomitrella patens	42.31	4.00e-120	423.00
IUUC-Pfo-096139	Poecilia formosa	44.11	3.00e-134	470.00
IUUC-Pab-097838	Pongo abelii	43.25	1.00e-115	408.00
IUUC-Pop-098945	Populus trichocarpa	52.02	4.00e-110	390.00
IUUC-Pca-100876	Procavia capensis	45.63	8.00e-93	332.00
IUUC-Ppe-101777	Prunus persica	52.33	9.00e-110	389.00
IUUC-Pva-102418	Pteropus vampyrus	43.61	7.00e-133	465.00
IUUC-Pgr-103456	Puccinia graminis	43.37	3.00e-127	447.00
IUUC-Ptt-103731	Puccinia triticina	41.77	6.00e-123	432.00
IUUC-Pte-104386	Pyrenophora teres	64.61	8.00e-162	561.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	58.38	7.00e-162	561.00
IUUC-Rno-105694	Rattus norvegicus	42.11	6.00e-123	432.00
IUUC-Sce-106339	Saccharomyces cerevisiae	40.11	5.00e-79	286.00
IUUC-Sha-106709	Sarcophilus harrisii	44.56	4.00e-135	473.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	45.11	1.00e-135	474.00
IUUC-Spo-108331	Schizosaccharomyces pombe	43.20	1.00e-123	434.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	61.47	2.00e-165	573.00
IUUC-Smo-108778	Selaginella moellendorffii	39.60	7.00e-109	385.00
IUUC-Sit-110446	Setaria italica	42.02	1.00e-116	411.00
IUUC-Sly-111330	Solanum lycopersicum	52.16	1.00e-111	395.00
IUUC-Stu-112610	Solanum tuberosum	52.16	1.00e-111	395.00
IUUC-Sar-113065	Sorex araneus	37.13	4.00e-33	134.00
IUUC-Sbi-114005	Sorghum bicolor	42.23	1.00e-115	408.00
IUUC-Sre-114988	Sporisorium reilianum	45.77	3.00e-138	483.00
IUUC-Ssc-115760	Sus scrofa	43.76	3.00e-133	467.00
IUUC-Tgu-116493	Taeniopygia guttata	45.42	1.00e-136	478.00
IUUC-Tru-118489	Takifugu rubripes	43.57	4.00e-133	466.00
IUUC-Tsy-119332	Tarsius syrichta	44.08	1.00e-135	474.00
IUUC-Tni-120202	Tetraodon nigroviridis	41.71	2.00e-123	434.00
IUUC-Tca-121429	Theobroma cacao	51.59	3.00e-109	387.00
IUUC-Tre-122162	Trichoderma reesei	56.76	2.00e-172	597.00
IUUC-Tvi-122500	Trichoderma virens	58.78	5.00e-174	602.00
IUUC-Tae-125557	Triticum aestivum	41.75	2.00e-115	407.00
IUUC-Tur-126554	Triticum urartu	41.52	1.00e-113	401.00
IUUC-Tme-126919	Tuber melanosporum	61.90	0.00e+00	729.00
IUUC-Tbe-127968	Tupaia belangeri	42.00	9.00e-125	438.00
IUUC-Ttr-129215	Tursiops truncatus	43.79	3.00e-131	460.00
IUUC-Uma-129622	Ustilago maydis	44.15	5.00e-133	466.00
IUUC-Vda-129750	Verticillium dahliae	60.19	0.00e+00	639.00
IUUC-Vpa-130617	Vicugna pacos	44.34	5.00e-128	449.00
IUUC-Vvi-131238	Vitis vinifera	51.16	1.00e-108	385.00
IUUC-Xtr-131865	Xenopus tropicalis	44.50	2.00e-134	471.00
IUUC-Xma-133627	Xiphophorus maculatus	44.29	1.00e-133	468.00
IUUC-Yli-134390	Yarrowia lipolytica	44.72	1.00e-111	395.00
IUUC-Zma-134910	Zea mays	42.23	6.00e-115	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence