iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090837

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ02086310

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000019518.4	ENSPTRT00000036151.4	ENSPTRP00000033419.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	28.0	21	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle ++  p++lpC H++++dCl ++        ++ rCP Cr
   Q: 21   CKICLEQLRA-PKTLPCLHTYCQDCLAQL-----ADGGRVRCPECR 60
           99******99.***************555.....499999*****8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MVSHGSSPSL LEALSSDFLA CKICLEQLRA PKTLPCLHTY CQDCLAQLAD GGRVRCPECR 60
ETVPVPPEGV ASFKTNFFVN GLLDLVKARA CGDLRAGKPA CALCPLVGGT SAGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCCC ACGGGTCCTC GCCCTCCCTC CTGGAGGCCC TGAGCAGCGA CTTCCTGGCC 60
TGTAAAATCT GCCTGGAGCA GCTGCGGGCA CCCAAGACAC TGCCCTGCCT GCATACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	82.95	0.00e+00	682.00
IUUC-Aca-004996	Anolis carolinensis	54.51	3.00e-76	279.00
IUUC-Bta-012368	Bos taurus	81.71	0.00e+00	655.00
IUUC-Cja-019698	Callithrix jacchus	89.40	0.00e+00	758.00
IUUC-Csa-023090	Chlorocebus sabaeus	96.72	0.00e+00	729.00
IUUC-Dno-030051	Dasypus novemcinctus	71.68	3.00e-158	551.00
IUUC-Ete-032312	Echinops telfairi	91.46	1.00e-72	265.00
IUUC-Eca-033253	Equus caballus	92.69	5.00e-97	347.00
IUUC-Eeu-034772	Erinaceus europaeus	87.21	2.00e-41	162.00
IUUC-Fca-036198	Felis catus	83.22	0.00e+00	679.00
IUUC-Ggo-045486	Gorilla gorilla	94.47	0.00e+00	744.00
IUUC-Hsa-046238	Homo sapiens	98.48	0.00e+00	746.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	80.54	1.00e-172	599.00
IUUC-Loc-052915	Lepisosteus oculatus	48.08	3.00e-47	183.00
IUUC-Laf-053640	Loxodonta africana	77.01	0.00e+00	633.00
IUUC-Mcc-055540	Macaca mulatta	96.97	0.00e+00	729.00
IUUC-Mmr-060840	Microcebus murinus	85.10	0.00e+00	634.00
IUUC-Mmu-064375	Mus musculus	74.09	2.00e-163	569.00
IUUC-Mpu-066797	Mustela putorius furo	83.98	0.00e+00	680.00
IUUC-Mlu-067996	Myotis lucifugus	83.66	0.00e+00	655.00
IUUC-Nle-069238	Nomascus leucogenys	98.63	8.00e-105	372.00
IUUC-Oga-089156	Otolemur garnettii	81.95	0.00e+00	659.00
IUUC-Oar-090056	Ovis aries	81.07	2.00e-177	615.00
IUUC-Psi-093493	Pelodiscus sinensis	46.24	6.00e-60	225.00
IUUC-Pab-097607	Pongo abelii	94.01	0.00e+00	768.00
IUUC-Pva-102758	Pteropus vampyrus	79.86	4.00e-179	621.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence