iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d019342	Zm00001d019342_T001	Zm00001d019342_T001
Zm00001d019342	Zm00001d019342_T002	Zm00001d019342_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-07	32.8	128	175
E3 activity/RING/RING	2.40e-09	39.6	131	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
            f C+  ++l   Pv++p+G+ +  ++  +w  +g + c ++r+p+  
   Q: 128  SFSCAFCMKLLDRPVTTPCGHNFCLKCFNRWTHNGASACGKCRRPIPY 175
           699****************************************99865 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  +++ p+++pCgH f+++C+++w       +++  C  Cr
   Q: 131  CAFCMKLLDR-PVTTPCGHNFCLKCFNRW-----THNGASACGKCR 170
           **********.9*****************.....677777888776 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAADLPCDDA GVCMVCGVAA PSEVDLLRCS TCATPWHSPC LSNPPALSEA AIWSCPDCSG 60
DPVAPAAPAA GGELVAAVRA IEADTTLSDA EKARRRQNIL AGRSAASAPD DDVDDSAEDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCCCCAAC TCCCAGACTC AGCCGCGCCG CAGGCTCGCT GCCGCCCCCA CCACCACTAT 60
GGCGGCCGAT CTTCCCTGCG ACGATGCTGG CGTCTGCATG GTCTGCGGTG TGGCCGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

zma:103632186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003819	Anas platyrhynchos	35.97	5.00e-44	172.00
IUUC-Cgl-026498	Colletotrichum gloeosporioides	33.07	4.00e-11	62.80
IUUC-Ggr-039874	Gaeumannomyces graminis	32.21	2.00e-09	56.60
IUUC-Lma-052953	Leptosphaeria maculans	30.56	6.00e-11	62.00
IUUC-Meu-056189	Macropus eugenii	52.46	9.00e-27	115.00
IUUC-Mdo-062659	Monodelphis domestica	46.51	2.00e-41	164.00
IUUC-Ncr-068942	Neurospora crassa	27.65	2.00e-06	47.00
IUUC-Oan-073109	Ornithorhynchus anatinus	34.66	3.00e-43	169.00
IUUC-Psi-093033	Pelodiscus sinensis	35.86	2.00e-44	174.00
IUUC-Sar-113546	Sorex araneus	48.00	6.00e-23	102.00
IUUC-Tgu-116945	Taeniopygia guttata	47.91	7.00e-42	165.00
IUUC-Tru-118292	Takifugu rubripes	46.98	5.00e-41	162.00
IUUC-Tni-120750	Tetraodon nigroviridis	46.98	1.00e-40	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence