iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099409

UUCD1 version

UUC-PoT-00931

Ensembl Protein ID

POPTR_0001s47480.1

UniProt Accession

A9P9W4; A9P9W4_POPTR

Genbank Protein ID

ABK93167.1; EEE85391.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

EF144965; CM000337

Gene Name

POPTRDRAFT_815913; POPTR_0001s47480g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s47480	POPTR_0001s47480.1	POPTR_0001s47480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-30	102.9	63	102
UBD/Beta-Prp	4.10e-43	148.8	113	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+dsv  l++     +l++++s+D+t+++WD r+g++ +
   Q: 63   GHADSVDQLCWdpKHaDLIATASGDKTVRLWDARSGKCSQ 102
           8**********9533799*******************987 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
           +++ pdg   + g +D+ + + d++++k++h  k  +++v  ++++ +g+ ++ ++   t++v   ++ q le t   h++   c++++p+
   Q: 113  ITYRPDGTHVAVGNRDDELTILDVRKFKPIHRRK-FNYEVNEIAWNMTGEMFLLTTGNGTVEVLSYPSLQPLE-TVMAHTAGCYCIAIDPK 201
           68899999*************************9.****************************999*******.***************** PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvs 239
           g++++ Gs+D+ v lWd++ + ++rt+t+  + +v+ +sf+++g +++s+s+d  + + +++tg+ v++    ++ ++sv+  p+ ++l+ 
   Q: 202  GRYFAVGSADSLVSLWDISEMLCVRTFTK-LEWPVRTISFNHTGDFIASASEDLFIDISNVHTGRSVHQIP-CRAAMNSVEWNPKYNLLAY 290
           ****************************9.**********************************9666555.5789999****99999999 PP
   S: 240  gssDg 244
           +++D+
   Q: 291  AGDDK 295
           99997 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEETIPFKNL HSREYQGHKK KVHSVAWNCT GTKLASGSVD QTARVWHIDL HGHGKIKDIE 60
LKGHADSVDQ LCWDPKHADL IATASGDKTV RLWDARSGKC SQQTELSGEN INITYRPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGTTCTAA TTTGCAGAGA TGGAGGAAAC GATACCGTTT AAGAATCTCC ATAGCAGAGA 60
GTATCAAGGT CACAAAAAGA AGGTTTAACT CAGTAAACCC TACTTTTAAC CCTTCTCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus

KEGG

pop:POPTR_0001s47480g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	76.69	4.00e-142	496.00
IUUC-Aml-001264	Ailuropoda melanoleuca	50.66	6.00e-92	330.00
IUUC-Atr-003050	Amborella trichopoda	88.57	4.00e-172	596.00
IUUC-Apl-003426	Anas platyrhynchos	45.04	2.00e-65	241.00
IUUC-Aca-004931	Anolis carolinensis	49.08	5.00e-64	236.00
IUUC-Aly-006237	Arabidopsis lyrata	87.30	2.00e-169	587.00
IUUC-Ath-007581	Arabidopsis thaliana	87.30	5.00e-169	586.00
IUUC-Acl-008253	Aspergillus clavatus	29.30	3.00e-41	162.00
IUUC-Afl-008519	Aspergillus flavus	34.26	4.00e-43	167.00
IUUC-Afu-008886	Aspergillus fumigatus	28.36	2.00e-36	145.00
IUUC-Ani-009275	Aspergillus nidulans	31.19	5.00e-41	161.00
IUUC-Ang-009862	Aspergillus niger	32.25	5.00e-43	167.00
IUUC-Ate-010247	Aspergillus terreus	30.61	2.00e-39	155.00
IUUC-Ame-010828	Astyanax mexicanus	51.15	2.00e-93	334.00
IUUC-Bgr-012163	Blumeria graminis	31.58	4.00e-35	140.00
IUUC-Bta-013514	Bos taurus	44.04	5.00e-77	280.00
IUUC-Bci-013639	Botrytis cinerea	28.98	1.00e-40	159.00
IUUC-Bdi-015049	Brachypodium distachyon	76.68	4.00e-147	513.00
IUUC-Bol-015401	Brassica oleracea	82.55	3.00e-162	563.00
IUUC-Bra-017867	Brassica rapa	82.87	2.00e-162	563.00
IUUC-Cel-018699	Caenorhabditis elegans	29.29	2.00e-34	139.00
IUUC-Cja-019591	Callithrix jacchus	50.66	5.00e-92	330.00
IUUC-Cfa-020692	Canis familiaris	50.66	4.00e-92	330.00
IUUC-Cpo-022135	Cavia porcellus	43.93	2.00e-71	261.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	33.00	2.00e-45	175.00
IUUC-Csa-023408	Chlorocebus sabaeus	50.66	7.00e-92	330.00
IUUC-Cho-024340	Choloepus hoffmanni	48.77	2.00e-57	214.00
IUUC-Cin-025418	Ciona intestinalis	52.63	5.00e-42	162.00
IUUC-Csv-026130	Ciona savignyi	53.47	3.00e-99	354.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	31.61	7.00e-46	177.00
IUUC-Cne-026775	Cryptococcus neoformans	41.59	3.00e-22	99.80
IUUC-Dre-028634	Danio rerio	51.15	4.00e-93	333.00
IUUC-Dno-029449	Dasypus novemcinctus	50.66	6.00e-92	330.00
IUUC-Dor-030301	Dipodomys ordii	54.84	2.00e-52	198.00
IUUC-Dse-031341	Dothistroma septosporum	30.31	2.00e-35	142.00
IUUC-Dme-031674	Drosophila melanogaster	49.52	6.00e-82	296.00
IUUC-Ete-033136	Echinops telfairi	50.66	2.00e-91	328.00
IUUC-Eca-034432	Equus caballus	45.72	2.00e-82	298.00
IUUC-Fca-035694	Felis catus	50.66	4.00e-92	330.00
IUUC-Fal-037328	Ficedula albicollis	50.82	3.00e-93	334.00
IUUC-Fox-037894	Fusarium oxysporum	32.41	1.00e-48	186.00
IUUC-Fso-038266	Fusarium solani	30.61	8.00e-45	173.00
IUUC-Gmo-039617	Gadus morhua	51.15	3.00e-92	331.00
IUUC-Ggr-039819	Gaeumannomyces graminis	28.94	8.00e-38	150.00
IUUC-Gga-041164	Gallus gallus	50.82	9.00e-93	333.00
IUUC-Gac-042407	Gasterosteus aculeatus	50.48	6.00e-93	333.00
IUUC-Gma-043718	Glycine max	92.65	3.00e-179	619.00
IUUC-Ggo-044989	Gorilla gorilla	50.66	7.00e-92	330.00
IUUC-Hsa-046784	Homo sapiens	50.66	6.00e-92	330.00
IUUC-Hvu-047633	Hordeum vulgare	76.74	5.00e-102	362.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	36.30	6.00e-51	193.00
IUUC-Kpa-049182	Komagataella pastoris	23.31	2.00e-14	72.40
IUUC-Lch-049894	Latimeria chalumnae	50.49	1.00e-92	332.00
IUUC-Lpe-051061	Leersia perrieri	67.74	1.00e-121	428.00
IUUC-Loc-052424	Lepisosteus oculatus	50.48	1.00e-93	335.00
IUUC-Lma-053127	Leptosphaeria maculans	29.47	1.00e-43	170.00
IUUC-Laf-053396	Loxodonta africana	50.99	2.00e-92	331.00
IUUC-Mcc-055517	Macaca mulatta	50.66	6.00e-92	330.00
IUUC-Meu-056034	Macropus eugenii	50.66	4.00e-92	330.00
IUUC-Mor-057011	Magnaporthe oryzae	28.12	7.00e-26	110.00
IUUC-Mpo-057490	Magnaporthe poae	28.85	8.00e-38	150.00
IUUC-Mtr-057927	Medicago truncatula	91.05	6.00e-176	608.00
IUUC-Mla-058945	Melampsora laricipopulina	37.54	3.00e-49	188.00
IUUC-Mga-060155	Meleagris gallopavo	52.70	7.00e-78	283.00
IUUC-Mvi-060344	Microbotryum violaceum	32.17	5.00e-44	171.00
IUUC-Mmr-060834	Microcebus murinus	50.99	2.00e-92	332.00
IUUC-Mdo-062587	Monodelphis domestica	50.66	3.00e-92	331.00
IUUC-Mmu-063395	Mus musculus	50.66	4.00e-92	330.00
IUUC-Mac-064579	Musa acuminata	84.29	1.00e-165	575.00
IUUC-Mpu-066688	Mustela putorius furo	53.75	4.00e-83	300.00
IUUC-Mlu-067299	Myotis lucifugus	50.66	4.00e-92	330.00
IUUC-Nfi-068562	Neosartorya fischeri	29.64	1.00e-38	153.00
IUUC-Ncr-068654	Neurospora crassa	29.84	2.00e-38	152.00
IUUC-Nle-069736	Nomascus leucogenys	50.00	1.00e-89	322.00
IUUC-Ont-071763	Oreochromis niloticus	50.48	1.00e-93	335.00
IUUC-Ocu-074909	Oryctolagus cuniculus	50.66	4.00e-92	330.00
IUUC-Oba-075902	Oryza barthii	68.06	2.00e-122	431.00
IUUC-Obr-076613	Oryza brachyantha	75.81	8.00e-143	499.00
IUUC-Ogl-077009	Oryza glaberrima	75.81	4.00e-143	500.00
IUUC-Ogu-078344	Oryza glumaepatula	68.06	2.00e-122	431.00
IUUC-Oin-079773	Oryza indica	75.81	4.00e-143	500.00
IUUC-Olo-080474	Oryza longistaminata	70.15	7.00e-81	292.00
IUUC-Ome-081837	Oryza meridionalis	64.63	8.00e-57	211.00
IUUC-Oni-082263	Oryza nivara	68.06	2.00e-122	431.00
IUUC-Opu-083813	Oryza punctata	76.13	8.00e-144	502.00
IUUC-Oru-084610	Oryza rufipogon	68.06	2.00e-122	431.00
IUUC-Osa-085415	Oryza sativa	75.48	1.00e-142	498.00
IUUC-Ola-086659	Oryzias latipes	50.80	8.00e-94	336.00
IUUC-Olu-087649	Ostreococcus lucimarinus	42.61	2.00e-64	238.00
IUUC-Oga-087923	Otolemur garnettii	50.66	1.00e-91	328.00
IUUC-Oar-089688	Ovis aries	51.16	7.00e-92	329.00
IUUC-Ptr-091628	Pan troglodytes	50.66	6.00e-92	330.00
IUUC-Pan-092586	Papio anubis	50.16	2.00e-90	324.00
IUUC-Psi-093701	Pelodiscus sinensis	51.81	4.00e-61	226.00
IUUC-Pma-094465	Petromyzon marinus	50.49	3.00e-91	327.00
IUUC-Pno-094767	Phaeosphaeria nodorum	29.76	2.00e-41	163.00
IUUC-Ppa-095195	Physcomitrella patens	84.92	2.00e-162	564.00
IUUC-Pfo-097383	Poecilia formosa	50.82	1.00e-92	332.00
IUUC-Pab-098669	Pongo abelii	50.66	6.00e-92	330.00
IUUC-Pca-100769	Procavia capensis	44.44	1.00e-71	263.00
IUUC-Ppe-101321	Prunus persica	88.54	3.00e-171	593.00
IUUC-Pva-102759	Pteropus vampyrus	50.66	5.00e-92	330.00
IUUC-Pgr-103535	Puccinia graminis	38.14	2.00e-54	205.00
IUUC-Ptt-103820	Puccinia triticina	37.82	1.00e-54	206.00
IUUC-Pte-104271	Pyrenophora teres	29.82	4.00e-38	151.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	30.45	4.00e-36	145.00
IUUC-Rno-106126	Rattus norvegicus	50.66	4.00e-92	330.00
IUUC-Sha-107146	Sarcophilus harrisii	49.67	2.00e-89	322.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	34.84	3.00e-54	204.00
IUUC-Spo-108324	Schizosaccharomyces pombe	34.95	2.00e-54	205.00
IUUC-Smo-108990	Selaginella moellendorffii	80.25	2.00e-157	548.00
IUUC-Sit-110773	Setaria italica	75.57	3.00e-140	490.00
IUUC-Sly-111619	Solanum lycopersicum	88.82	2.00e-173	600.00
IUUC-Stu-112241	Solanum tuberosum	88.82	1.00e-172	598.00
IUUC-Sbi-114842	Sorghum bicolor	74.59	4.00e-138	483.00
IUUC-Sre-115070	Sporisorium reilianum	34.03	2.00e-49	188.00
IUUC-Ssc-115581	Sus scrofa	50.66	4.00e-92	330.00
IUUC-Tgu-117354	Taeniopygia guttata	50.85	2.00e-89	321.00
IUUC-Tru-117745	Takifugu rubripes	49.36	1.00e-90	325.00
IUUC-Tni-120050	Tetraodon nigroviridis	49.04	3.00e-89	321.00
IUUC-Tca-121279	Theobroma cacao	92.01	2.00e-178	617.00
IUUC-Tre-121952	Trichoderma reesei	32.60	2.00e-49	189.00
IUUC-Tvi-122581	Trichoderma virens	32.00	4.00e-49	187.00
IUUC-Tae-125697	Triticum aestivum	75.72	3.00e-146	510.00
IUUC-Tur-126279	Triticum urartu	73.31	2.00e-140	491.00
IUUC-Tme-127000	Tuber melanosporum	31.78	9.00e-42	163.00
IUUC-Ttr-128405	Tursiops truncatus	50.78	1.00e-80	292.00
IUUC-Uma-129547	Ustilago maydis	35.01	7.00e-49	187.00
IUUC-Vda-129689	Verticillium dahliae	29.83	1.00e-37	149.00
IUUC-Vvi-131345	Vitis vinifera	92.65	3.00e-180	623.00
IUUC-Xtr-132136	Xenopus tropicalis	50.00	4.00e-90	323.00
IUUC-Xma-133767	Xiphophorus maculatus	50.16	1.00e-92	332.00
IUUC-Yli-134522	Yarrowia lipolytica	28.45	8.00e-31	127.00
IUUC-Zma-135816	Zea mays	73.62	2.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence