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Tag Content
UUCD2 ID IUUC-Sbi-114842
UUCD1 version UUC-SoB-00444
Ensembl Protein ID Sb02g020440.1
UniProt Accession C5X8Y2; C5X8Y2_SORBI
Genbank Protein ID EER96518.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G160700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g020440 Sb02g020440.1 Sb02g020440.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-24 85.5 82 119
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtdsv  l++  +  +++++++ D++i++WD r+g++
   Q: 82   GHTDSVDQLCWdpNHpDTVATAAADKSIRLWDARSGKC 119
           8***********644788*****************998 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MENREEERKG SGGAAGGGGS TPGANLRDLV SREYYGHKKK VHSVAWNCLG TKLASGSIDH 60
TARVWSIDPH GHSKVKDIEL KGHTDSVDQL CWDPNHPDTV ATAAADKSIR LWDARSGKCQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114842|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AACGGGCAGA GGGAGCGAAC GCATGGAGAA CAGAGAAGAG GAGAGGAAGG GCAGCGGTGG 60
CGCCGCCGGC GGCGGCGGCT CGACTCCTGG GGCGAACCTA AGGGACCTGG TGTCGAGGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114842|E3,WD_repeat|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus
GO:0010267--P:production of ta-siRNAs involved in RNA interference
KEGG sbi:SORBI_02g020440
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000099 Aegilops tauschii 88.47 1.00e-157 548.00
IUUC-Aml-001264 Ailuropoda melanoleuca 49.83 3.00e-83 300.00
IUUC-Atr-003050 Amborella trichopoda 73.95 3.00e-139 486.00
IUUC-Apl-003426 Anas platyrhynchos 44.66 2.00e-60 224.00
IUUC-Aca-004931 Anolis carolinensis 48.80 2.00e-55 207.00
IUUC-Aly-006237 Arabidopsis lyrata 75.97 2.00e-139 487.00
IUUC-Ath-007581 Arabidopsis thaliana 75.97 3.00e-139 486.00
IUUC-Acl-008253 Aspergillus clavatus 27.87 2.00e-34 139.00
IUUC-Afl-008519 Aspergillus flavus 32.56 1.00e-38 152.00
IUUC-Afu-008886 Aspergillus fumigatus 26.84 3.00e-32 131.00
IUUC-Ani-009275 Aspergillus nidulans 30.39 9.00e-36 143.00
IUUC-Ang-009862 Aspergillus niger 31.07 9.00e-38 149.00
IUUC-Ate-010247 Aspergillus terreus 29.94 3.00e-35 141.00
IUUC-Ame-010828 Astyanax mexicanus 49.67 7.00e-84 302.00
IUUC-Bgr-012163 Blumeria graminis 29.32 4.00e-32 130.00
IUUC-Bta-013514 Bos taurus 43.56 1.00e-69 255.00
IUUC-Bci-013639 Botrytis cinerea 29.68 1.00e-39 155.00
IUUC-Bdi-015049 Brachypodium distachyon 83.09 8.00e-163 565.00
IUUC-Bol-015401 Brassica oleracea 74.84 1.00e-136 478.00
IUUC-Bra-017867 Brassica rapa 74.84 7.00e-137 478.00
IUUC-Cel-018699 Caenorhabditis elegans 29.64 5.00e-29 120.00
IUUC-Cja-019591 Callithrix jacchus 50.17 6.00e-84 303.00
IUUC-Cfa-020692 Canis familiaris 49.83 2.00e-83 301.00
IUUC-Cpo-022135 Cavia porcellus 43.61 2.00e-65 242.00
IUUC-Cre-022572 Chlamydomonas reinhardtii 33.55 5.00e-44 170.00
IUUC-Csa-023408 Chlorocebus sabaeus 49.83 1.00e-83 302.00
IUUC-Cho-024340 Choloepus hoffmanni 48.04 3.00e-50 190.00
IUUC-Cin-025418 Ciona intestinalis 51.94 3.00e-40 155.00
IUUC-Csv-026130 Ciona savignyi 51.16 2.00e-88 317.00
IUUC-Cgl-026744 Colletotrichum gloeosporioides 29.81 3.00e-40 157.00
IUUC-Cne-026775 Cryptococcus neoformans 41.18 4.00e-20 92.40
IUUC-Dre-028634 Danio rerio 50.33 7.00e-85 306.00
IUUC-Dno-029449 Dasypus novemcinctus 49.83 3.00e-83 300.00
IUUC-Dor-030301 Dipodomys ordii 53.85 1.00e-45 175.00
IUUC-Dse-031341 Dothistroma septosporum 27.62 2.00e-29 122.00
IUUC-Dme-031674 Drosophila melanogaster 49.16 2.00e-77 281.00
IUUC-Ete-033136 Echinops telfairi 49.17 9.00e-82 296.00
IUUC-Eca-034432 Equus caballus 45.57 2.00e-75 275.00
IUUC-Fca-035694 Felis catus 49.83 2.00e-83 301.00
IUUC-Fal-037328 Ficedula albicollis 50.00 4.00e-84 303.00
IUUC-Fox-037894 Fusarium oxysporum 31.25 1.00e-41 162.00
IUUC-Fso-038266 Fusarium solani 29.90 5.00e-38 150.00
IUUC-Gmo-039617 Gadus morhua 50.83 4.00e-84 303.00
IUUC-Ggr-039819 Gaeumannomyces graminis 26.61 6.00e-33 133.00
IUUC-Gga-041164 Gallus gallus 50.00 8.00e-84 303.00
IUUC-Gac-042407 Gasterosteus aculeatus 51.16 6.00e-85 306.00
IUUC-Gma-043718 Glycine max 74.10 9.00e-139 485.00
IUUC-Ggo-044989 Gorilla gorilla 49.83 1.00e-83 301.00
IUUC-Hsa-046784 Homo sapiens 49.83 1.00e-83 302.00
IUUC-Hvu-047633 Hordeum vulgare 86.45 6.00e-110 389.00
IUUC-Itr-048184 Ictidomys tridecemlineatus 35.97 1.00e-47 182.00
IUUC-Lch-049894 Latimeria chalumnae 49.83 1.00e-83 301.00
IUUC-Lpe-051061 Leersia perrieri 78.03 1.00e-142 498.00
IUUC-Loc-052424 Lepisosteus oculatus 50.50 1.00e-84 305.00
IUUC-Lma-053127 Leptosphaeria maculans 30.82 6.00e-42 165.00
IUUC-Laf-053396 Loxodonta africana 50.17 1.00e-83 302.00
IUUC-Mcc-055517 Macaca mulatta 49.83 1.00e-83 302.00
IUUC-Meu-056034 Macropus eugenii 49.83 4.00e-83 300.00
IUUC-Mor-057011 Magnaporthe oryzae 24.32 1.00e-19 89.40
IUUC-Mpo-057490 Magnaporthe poae 26.52 5.00e-33 134.00
IUUC-Mtr-057927 Medicago truncatula 74.18 6.00e-139 485.00
IUUC-Mla-058945 Melampsora laricipopulina 35.15 5.00e-47 180.00
IUUC-Mga-060155 Meleagris gallopavo 51.24 5.00e-69 253.00
IUUC-Mvi-060344 Microbotryum violaceum 29.90 8.00e-38 150.00
IUUC-Mmr-060834 Microcebus murinus 50.17 1.00e-83 302.00
IUUC-Mdo-062587 Monodelphis domestica 49.50 1.00e-82 298.00
IUUC-Mmu-063395 Mus musculus 49.83 2.00e-83 301.00
IUUC-Mac-064579 Musa acuminata 78.18 4.00e-145 506.00
IUUC-Mpu-066688 Mustela putorius furo 52.36 3.00e-74 271.00
IUUC-Mlu-067299 Myotis lucifugus 49.83 6.00e-83 300.00
IUUC-Nfi-068562 Neosartorya fischeri 27.46 9.00e-33 133.00
IUUC-Ncr-068654 Neurospora crassa 28.20 4.00e-34 137.00
IUUC-Nle-069736 Nomascus leucogenys 49.17 3.00e-81 294.00
IUUC-Ont-071763 Oreochromis niloticus 50.50 3.00e-84 304.00
IUUC-Ocu-074909 Oryctolagus cuniculus 49.83 3.00e-83 301.00
IUUC-Oba-075902 Oryza barthii 78.66 3.00e-143 499.00
IUUC-Obr-076613 Oryza brachyantha 86.45 3.00e-160 556.00
IUUC-Ogl-077009 Oryza glaberrima 87.26 2.00e-164 570.00
IUUC-Ogu-078344 Oryza glumaepatula 78.66 3.00e-143 499.00
IUUC-Oin-079773 Oryza indica 87.26 2.00e-164 570.00
IUUC-Olo-080474 Oryza longistaminata 83.58 5.00e-96 342.00
IUUC-Ome-081837 Oryza meridionalis 80.36 2.00e-75 273.00
IUUC-Oni-082263 Oryza nivara 78.66 3.00e-143 499.00
IUUC-Opu-083813 Oryza punctata 86.94 1.00e-163 567.00
IUUC-Oru-084610 Oryza rufipogon 76.05 2.00e-143 500.00
IUUC-Osa-085415 Oryza sativa 86.94 7.00e-164 568.00
IUUC-Ola-086659 Oryzias latipes 51.16 4.00e-85 306.00
IUUC-Olu-087649 Ostreococcus lucimarinus 41.34 5.00e-55 207.00
IUUC-Oga-087923 Otolemur garnettii 49.50 6.00e-83 300.00
IUUC-Oar-089688 Ovis aries 49.83 6.00e-83 300.00
IUUC-Ptr-091628 Pan troglodytes 49.83 1.00e-83 302.00
IUUC-Pan-092586 Papio anubis 49.02 2.00e-82 298.00
IUUC-Psi-093701 Pelodiscus sinensis 50.00 1.00e-53 202.00
IUUC-Pma-094465 Petromyzon marinus 50.00 2.00e-82 298.00
IUUC-Pno-094767 Phaeosphaeria nodorum 30.26 6.00e-39 154.00
IUUC-Ppa-095195 Physcomitrella patens 72.26 5.00e-137 479.00
IUUC-Pfo-097383 Poecilia formosa 49.83 4.00e-83 300.00
IUUC-Pab-098669 Pongo abelii 49.83 1.00e-83 302.00
IUUC-Pop-099409 Populus trichocarpa 74.59 3.00e-138 483.00
IUUC-Pca-100769 Procavia capensis 44.22 7.00e-66 243.00
IUUC-Ppe-101321 Prunus persica 74.10 5.00e-137 479.00
IUUC-Pva-102759 Pteropus vampyrus 49.83 2.00e-83 301.00
IUUC-Pgr-103535 Puccinia graminis 36.42 5.00e-52 197.00
IUUC-Ptt-103820 Puccinia triticina 36.10 3.00e-51 194.00
IUUC-Pte-104271 Pyrenophora teres 29.82 1.00e-36 145.00
IUUC-Pyt-104500 Pyrenophora triticirepentis 30.04 1.00e-32 133.00
IUUC-Rno-106126 Rattus norvegicus 49.83 2.00e-83 301.00
IUUC-Sce-106455 Saccharomyces cerevisiae 23.44 5.00e-13 67.80
IUUC-Sha-107146 Sarcophilus harrisii 48.84 1.00e-80 292.00
IUUC-Sja-107865 Schizosaccharomyces japonicus 36.36 2.00e-48 184.00
IUUC-Spo-108324 Schizosaccharomyces pombe 36.63 9.00e-50 189.00
IUUC-Smo-108990 Selaginella moellendorffii 68.35 1.00e-128 451.00
IUUC-Sit-110773 Setaria italica 94.31 0.00e+00 644.00
IUUC-Sly-111619 Solanum lycopersicum 76.14 5.00e-143 499.00
IUUC-Stu-112241 Solanum tuberosum 76.14 2.00e-142 497.00
IUUC-Sre-115070 Sporisorium reilianum 33.02 4.00e-46 177.00
IUUC-Ssc-115581 Sus scrofa 49.83 2.00e-83 301.00
IUUC-Tgu-117354 Taeniopygia guttata 50.34 4.00e-83 300.00
IUUC-Tru-117745 Takifugu rubripes 48.68 4.00e-83 300.00
IUUC-Tni-120050 Tetraodon nigroviridis 48.34 3.00e-81 294.00
IUUC-Tca-121279 Theobroma cacao 75.82 3.00e-141 493.00
IUUC-Tre-121952 Trichoderma reesei 30.46 3.00e-42 164.00
IUUC-Tvi-122581 Trichoderma virens 30.46 1.00e-42 166.00
IUUC-Tae-125697 Triticum aestivum 82.49 4.00e-162 562.00
IUUC-Tur-126279 Triticum urartu 80.60 8.00e-157 545.00
IUUC-Tme-127000 Tuber melanosporum 31.20 2.00e-38 151.00
IUUC-Ttr-128405 Tursiops truncatus 50.19 2.00e-72 264.00
IUUC-Uma-129547 Ustilago maydis 33.33 2.00e-45 175.00
IUUC-Vda-129689 Verticillium dahliae 28.72 1.00e-31 129.00
IUUC-Vvi-131345 Vitis vinifera 75.90 3.00e-140 490.00
IUUC-Xtr-132136 Xenopus tropicalis 49.34 2.00e-81 295.00
IUUC-Xma-133767 Xiphophorus maculatus 49.83 5.00e-83 300.00
IUUC-Yli-134522 Yarrowia lipolytica 26.98 1.00e-26 113.00
IUUC-Zma-135816 Zea mays 96.99 0.00e+00 641.00
Created Date 25-Jun-2017

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