iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132442

Ensembl Protein ID

ENSXETP00000016443.2

UniProt Accession

F6Q0Y3; F6Q0Y3_XENTR

Genbank Protein ID

ENSXETP00000016443

Protein Name

Recombination-activating gene 1

Genbank Nucleotide ID

AAMC01068865

Gene Name

rag1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000007548.2	ENSXETT00000016443.2	ENSXETP00000016443.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	86.08	5.00e-98	353.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MGDVSEKHGS GPAVPEKAVR FSFTVMNISV ANNSGQVRIF EETKPNSELC CKPLCLMLAD 60
ESDHETLTAI LCPLIAEREA MKTAELLLEI GGILRSFKFM FRGTGYDEKL VREVEGLEAS 120

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Nucleotide Sequence
(Fasta)

GCTTATTATC CAGAGCTGGG AATCAGTGAG ACTGTTGAGC CTGAGCAGTG ACAGCCTGAC 60
AGCAGGTAAT GTATCTCTCT CTCTACTCCA TCCATTGCTC CCTGTCACTG CCTTATGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR024627--RAG1

Pfam

PF12940--RAG1

Gene Ontology

GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0033151--P:V(D)J recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	86.08	2.00e-99	357.00
IUUC-Apl-003271	Anas platyrhynchos	88.66	2.00e-100	360.00
IUUC-Aca-004400	Anolis carolinensis	81.96	8.00e-95	341.00
IUUC-Ame-011295	Astyanax mexicanus	73.98	1.00e-73	271.00
IUUC-Bta-012421	Bos taurus	87.11	5.00e-100	359.00
IUUC-Cja-019891	Callithrix jacchus	86.08	6.00e-100	358.00
IUUC-Cfa-020740	Canis familiaris	84.54	2.00e-96	347.00
IUUC-Cpo-021800	Cavia porcellus	86.60	4.00e-99	356.00
IUUC-Csa-024203	Chlorocebus sabaeus	85.57	3.00e-99	356.00
IUUC-Dre-028416	Danio rerio	73.98	2.00e-74	274.00
IUUC-Dno-029101	Dasypus novemcinctus	85.05	1.00e-97	351.00
IUUC-Eca-033385	Equus caballus	85.57	5.00e-99	355.00
IUUC-Fca-036545	Felis catus	86.08	2.00e-98	353.00
IUUC-Fal-037208	Ficedula albicollis	88.14	7.00e-100	358.00
IUUC-Gmo-039622	Gadus morhua	69.31	3.00e-79	290.00
IUUC-Gga-041182	Gallus gallus	88.14	6.00e-100	358.00
IUUC-Gac-041682	Gasterosteus aculeatus	72.96	2.00e-82	300.00
IUUC-Ggo-044510	Gorilla gorilla	85.05	6.00e-99	355.00
IUUC-Hsa-045964	Homo sapiens	85.57	3.00e-99	356.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	85.57	5.00e-99	355.00
IUUC-Lch-050041	Latimeria chalumnae	84.10	3.00e-94	340.00
IUUC-Loc-052464	Lepisosteus oculatus	76.41	2.00e-86	313.00
IUUC-Laf-053544	Loxodonta africana	86.08	1.00e-99	357.00
IUUC-Mcc-054867	Macaca mulatta	85.57	2.00e-99	357.00
IUUC-Meu-055986	Macropus eugenii	86.08	2.00e-98	353.00
IUUC-Mga-059262	Meleagris gallopavo	87.63	6.00e-100	358.00
IUUC-Mdo-062686	Monodelphis domestica	86.60	6.00e-99	355.00
IUUC-Mmu-064297	Mus musculus	86.08	2.00e-98	353.00
IUUC-Mpu-066027	Mustela putorius furo	85.57	1.00e-98	354.00
IUUC-Mlu-067885	Myotis lucifugus	87.63	1.00e-100	360.00
IUUC-Nle-070073	Nomascus leucogenys	85.57	2.00e-99	357.00
IUUC-Ont-071400	Oreochromis niloticus	73.98	1.00e-83	304.00
IUUC-Oan-072920	Ornithorhynchus anatinus	86.19	4.00e-91	327.00
IUUC-Ocu-074616	Oryctolagus cuniculus	86.60	8.00e-100	358.00
IUUC-Ola-086828	Oryzias latipes	74.49	4.00e-85	309.00
IUUC-Oga-088675	Otolemur garnettii	85.57	5.00e-99	353.00
IUUC-Oar-090380	Ovis aries	86.60	8.00e-100	358.00
IUUC-Ptr-090648	Pan troglodytes	85.57	2.00e-99	357.00
IUUC-Pan-092036	Papio anubis	85.57	2.00e-99	357.00
IUUC-Psi-093130	Pelodiscus sinensis	87.11	3.00e-99	356.00
IUUC-Pfo-097273	Poecilia formosa	75.00	2.00e-84	307.00
IUUC-Pca-100134	Procavia capensis	86.08	2.00e-99	357.00
IUUC-Rno-105632	Rattus norvegicus	87.11	5.00e-99	355.00
IUUC-Sha-107238	Sarcophilus harrisii	85.57	3.00e-98	353.00
IUUC-Sar-113591	Sorex araneus	86.62	3.00e-70	260.00
IUUC-Ssc-115720	Sus scrofa	85.57	2.00e-99	357.00
IUUC-Tgu-117030	Taeniopygia guttata	87.11	6.00e-99	355.00
IUUC-Tru-117669	Takifugu rubripes	72.31	2.00e-80	293.00
IUUC-Tsy-119578	Tarsius syrichta	83.51	5.00e-97	349.00
IUUC-Tni-120073	Tetraodon nigroviridis	72.31	1.00e-80	294.00
IUUC-Ttr-128677	Tursiops truncatus	78.82	1.00e-77	284.00
IUUC-Vpa-130346	Vicugna pacos	84.02	2.00e-97	350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence