iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000007666.3	ENSMMUT00000010738.3	ENSMMUP00000010074.3
ENSMMUG00000007666.3	ENSMMUT00000010740.2	ENSMMUP00000010076.1
ENSMMUG00000007666.3	ENSMMUT00000039630.2	ENSMMUP00000032694.2
ENSMMUG00000007666.3	ENSMMUT00000010739.2	ENSMMUP00000010075.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-13	49.7	170	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + +++
   Q: 170  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAKEVQT 209
           8**********98559******************998875 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

PFFSVFLDSS LQTEVFQALQ RLHMTIFSQS VSPCGKFLAA GNNYGQIAIF SLSAALSSEA 60
KEESKKPVVT FQAHDGPVYS MVSTDRHLLS AGDGEVKAWL WAEMLKKVRT PCDCSCPNFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCTTTGCT CAGCAATCTT TATTCAGTTC TTCTTGGGGG TGGGATGCCT CCCTTCCCAT 60
GCTCCCACCC CTCCCATCCC AGAGCTCCGT TGGGCTCAGT GTCCTCTGTT GAGGGAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.03	8.00e-27	114.00
IUUC-Aml-001693	Ailuropoda melanoleuca	88.92	3.00e-153	534.00
IUUC-Atr-002699	Amborella trichopoda	30.00	6.00e-23	101.00
IUUC-Aca-004231	Anolis carolinensis	64.16	8.00e-110	390.00
IUUC-Aly-006385	Arabidopsis lyrata	27.63	1.00e-24	107.00
IUUC-Ath-006723	Arabidopsis thaliana	27.30	5.00e-24	105.00
IUUC-Ame-010813	Astyanax mexicanus	59.55	7.00e-77	280.00
IUUC-Bta-013458	Bos taurus	88.32	7.00e-153	533.00
IUUC-Bdi-014935	Brachypodium distachyon	28.63	4.00e-27	115.00
IUUC-Bol-015442	Brassica oleracea	27.86	1.00e-24	107.00
IUUC-Bra-017807	Brassica rapa	27.81	4.00e-24	105.00
IUUC-Cja-019061	Callithrix jacchus	89.61	9.00e-157	545.00
IUUC-Cfa-021146	Canis familiaris	88.62	4.00e-154	537.00
IUUC-Cpo-022512	Cavia porcellus	88.02	1.00e-153	535.00
IUUC-Csa-023055	Chlorocebus sabaeus	90.42	2.00e-157	548.00
IUUC-Cho-024693	Choloepus hoffmanni	81.91	3.00e-79	287.00
IUUC-Cin-025181	Ciona intestinalis	34.76	2.00e-53	202.00
IUUC-Csv-025852	Ciona savignyi	35.26	6.00e-48	184.00
IUUC-Dre-028221	Danio rerio	56.27	2.00e-106	379.00
IUUC-Dno-029200	Dasypus novemcinctus	77.20	2.00e-68	251.00
IUUC-Dor-030863	Dipodomys ordii	88.02	9.00e-155	539.00
IUUC-Dme-032016	Drosophila melanogaster	27.05	2.00e-32	133.00
IUUC-Eca-034363	Equus caballus	88.32	5.00e-154	536.00
IUUC-Fca-036546	Felis catus	88.92	8.00e-154	536.00
IUUC-Gmo-038513	Gadus morhua	53.71	1.00e-96	346.00
IUUC-Gac-042606	Gasterosteus aculeatus	54.43	7.00e-101	360.00
IUUC-Gma-043171	Glycine max	27.76	3.00e-29	122.00
IUUC-Ggo-044877	Gorilla gorilla	91.02	6.00e-158	550.00
IUUC-Hsa-045813	Homo sapiens	90.42	7.00e-158	549.00
IUUC-Hvu-047782	Hordeum vulgare	31.08	2.00e-20	92.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	88.62	8.00e-154	536.00
IUUC-Lch-049506	Latimeria chalumnae	59.35	1.00e-104	373.00
IUUC-Lpe-051203	Leersia perrieri	31.45	2.00e-22	99.80
IUUC-Loc-052451	Lepisosteus oculatus	49.24	2.00e-83	302.00
IUUC-Laf-053864	Loxodonta africana	88.02	3.00e-153	534.00
IUUC-Meu-055926	Macropus eugenii	83.73	1.00e-140	492.00
IUUC-Mtr-058556	Medicago truncatula	28.78	2.00e-29	123.00
IUUC-Mmr-060836	Microcebus murinus	88.92	9.00e-155	539.00
IUUC-Mdo-062534	Monodelphis domestica	81.92	2.00e-140	491.00
IUUC-Mmu-063560	Mus musculus	87.43	5.00e-151	526.00
IUUC-Mac-065134	Musa acuminata	26.51	2.00e-23	103.00
IUUC-Mpu-066031	Mustela putorius furo	89.22	3.00e-155	540.00
IUUC-Mlu-068051	Myotis lucifugus	87.13	3.00e-151	527.00
IUUC-Nle-069080	Nomascus leucogenys	90.42	1.00e-156	545.00
IUUC-Opr-070787	Ochotona princeps	82.93	5.00e-140	490.00
IUUC-Ont-071952	Oreochromis niloticus	52.91	4.00e-99	354.00
IUUC-Oan-073334	Ornithorhynchus anatinus	77.74	3.00e-103	367.00
IUUC-Oba-075175	Oryza barthii	32.08	3.00e-23	102.00
IUUC-Obr-076393	Oryza brachyantha	32.70	4.00e-23	102.00
IUUC-Ogl-077603	Oryza glaberrima	38.00	2.00e-16	79.30
IUUC-Ogu-078211	Oryza glumaepatula	32.08	3.00e-23	102.00
IUUC-Oin-079554	Oryza indica	32.08	2.00e-23	103.00
IUUC-Olo-080922	Oryza longistaminata	33.81	9.00e-21	94.40
IUUC-Ome-081127	Oryza meridionalis	24.53	7.00e-10	58.90
IUUC-Oni-082376	Oryza nivara	32.08	4.00e-23	102.00
IUUC-Opu-083163	Oryza punctata	31.45	1.00e-22	100.00
IUUC-Oru-084311	Oryza rufipogon	32.08	5.00e-23	102.00
IUUC-Osa-085762	Oryza sativa	38.00	3.00e-16	78.60
IUUC-Oga-088804	Otolemur garnettii	87.72	5.00e-152	530.00
IUUC-Oar-090095	Ovis aries	87.72	5.00e-152	530.00
IUUC-Ptr-090731	Pan troglodytes	90.72	7.00e-158	549.00
IUUC-Pan-092595	Papio anubis	91.32	4.00e-158	550.00
IUUC-Psi-093866	Pelodiscus sinensis	64.17	7.00e-100	356.00
IUUC-Pma-094236	Petromyzon marinus	55.32	1.00e-101	363.00
IUUC-Pfo-096095	Poecilia formosa	53.82	2.00e-95	342.00
IUUC-Pab-098385	Pongo abelii	91.02	9.00e-158	549.00
IUUC-Pop-099433	Populus trichocarpa	25.96	1.00e-26	114.00
IUUC-Pca-101119	Procavia capensis	95.15	1.00e-109	389.00
IUUC-Ppe-101677	Prunus persica	27.31	1.00e-23	103.00
IUUC-Pva-102726	Pteropus vampyrus	88.62	3.00e-153	534.00
IUUC-Rno-105576	Rattus norvegicus	88.02	6.00e-152	530.00
IUUC-Sha-106774	Sarcophilus harrisii	84.34	2.00e-141	495.00
IUUC-Sit-109988	Setaria italica	26.74	2.00e-25	109.00
IUUC-Sly-110864	Solanum lycopersicum	30.16	2.00e-26	113.00
IUUC-Sar-113060	Sorex araneus	77.61	2.00e-108	384.00
IUUC-Sbi-114699	Sorghum bicolor	27.82	4.00e-26	112.00
IUUC-Ssc-116445	Sus scrofa	88.62	1.00e-154	538.00
IUUC-Tru-117834	Takifugu rubripes	55.35	3.00e-102	365.00
IUUC-Tni-119651	Tetraodon nigroviridis	54.74	7.00e-103	367.00
IUUC-Tca-121318	Theobroma cacao	26.91	1.00e-24	107.00
IUUC-Tae-124184	Triticum aestivum	29.03	8.00e-27	114.00
IUUC-Tur-126226	Triticum urartu	32.08	6.00e-24	104.00
IUUC-Tbe-128079	Tupaia belangeri	72.89	2.00e-94	338.00
IUUC-Ttr-128391	Tursiops truncatus	83.88	7.00e-142	496.00
IUUC-Vvi-131148	Vitis vinifera	26.40	3.00e-22	99.40
IUUC-Xtr-132743	Xenopus tropicalis	58.26	3.00e-101	361.00
IUUC-Xma-133722	Xiphophorus maculatus	54.13	3.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence