iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-068051

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02021030

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000001377.2	ENSMLUT00000001381.2	ENSMLUP00000001270.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-14	53.7	161	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtd ++cla+   ++ ++sG+ Dgt+++WDlr  + ++
   Q: 161  GHTDYIHCLALrdRNPEVLSGGEDGTVRLWDLRMAKEVQ 199
           8**********87449****************9887776 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MERAVPPTVP LGQMEVFQAL QRLHMTIFSQ CFSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPIV TFQAHDGPVY SMVSTDRHLF SAGDGEVKAW LWAEILKKGC KELWCRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAG CTGTACCGCC CACGGTGCCT CTGGGTCAGG TGAGGCGGAC ATGGTGCGCG 60
GTGCCTTCTG GGGTTTGTAG TCTATGCCCA GTTCAGAAGG GGAGAGCTAG GAGTCCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	30.12	2.00e-30	126.00
IUUC-Aml-001693	Ailuropoda melanoleuca	93.55	3.00e-172	597.00
IUUC-Atr-002699	Amborella trichopoda	30.80	4.00e-23	102.00
IUUC-Aca-004231	Anolis carolinensis	68.60	4.00e-122	431.00
IUUC-Aly-006385	Arabidopsis lyrata	29.28	2.00e-27	116.00
IUUC-Ath-006723	Arabidopsis thaliana	28.62	9.00e-28	117.00
IUUC-Ame-010813	Astyanax mexicanus	61.86	6.00e-83	300.00
IUUC-Bta-013458	Bos taurus	92.38	5.00e-169	586.00
IUUC-Bdi-014935	Brachypodium distachyon	29.84	5.00e-30	125.00
IUUC-Bol-015442	Brassica oleracea	29.15	9.00e-28	117.00
IUUC-Bra-017807	Brassica rapa	29.85	4.00e-28	118.00
IUUC-Cja-019061	Callithrix jacchus	93.27	1.00e-171	595.00
IUUC-Cfa-021146	Canis familiaris	92.96	3.00e-171	593.00
IUUC-Cpo-022512	Cavia porcellus	91.79	3.00e-169	587.00
IUUC-Csa-023055	Chlorocebus sabaeus	92.38	3.00e-171	594.00
IUUC-Cho-024693	Choloepus hoffmanni	92.27	1.00e-93	335.00
IUUC-Cin-025181	Ciona intestinalis	37.50	2.00e-59	222.00
IUUC-Csv-025852	Ciona savignyi	35.87	4.00e-50	191.00
IUUC-Dre-028221	Danio rerio	57.76	9.00e-113	399.00
IUUC-Dno-029200	Dasypus novemcinctus	85.71	2.00e-81	294.00
IUUC-Dor-030863	Dipodomys ordii	91.79	2.00e-169	587.00
IUUC-Dme-032016	Drosophila melanogaster	28.75	3.00e-35	142.00
IUUC-Eca-034363	Equus caballus	93.84	4.00e-173	600.00
IUUC-Fca-036546	Felis catus	93.55	3.00e-172	597.00
IUUC-Gmo-038513	Gadus morhua	56.39	3.00e-102	364.00
IUUC-Gac-042606	Gasterosteus aculeatus	55.59	2.00e-107	382.00
IUUC-Gma-042881	Glycine max	28.43	2.00e-30	126.00
IUUC-Ggo-044877	Gorilla gorilla	92.96	1.00e-171	595.00
IUUC-Hsa-045813	Homo sapiens	92.96	9.00e-172	595.00
IUUC-Hvu-047782	Hordeum vulgare	32.43	5.00e-22	97.10
IUUC-Itr-047876	Ictidomys tridecemlineatus	92.38	4.00e-170	590.00
IUUC-Lch-049506	Latimeria chalumnae	62.61	1.00e-114	406.00
IUUC-Lpe-051203	Leersia perrieri	33.14	2.00e-26	113.00
IUUC-Loc-052451	Lepisosteus oculatus	51.74	3.00e-88	318.00
IUUC-Laf-053864	Loxodonta africana	92.96	6.00e-171	593.00
IUUC-Mcc-055705	Macaca mulatta	87.13	4.00e-151	526.00
IUUC-Meu-055926	Macropus eugenii	88.41	3.00e-151	527.00
IUUC-Mtr-058556	Medicago truncatula	28.74	8.00e-31	127.00
IUUC-Mmr-060836	Microcebus murinus	93.26	2.00e-172	598.00
IUUC-Mdo-062534	Monodelphis domestica	89.02	5.00e-151	526.00
IUUC-Mmu-063560	Mus musculus	91.50	1.00e-168	585.00
IUUC-Mac-065134	Musa acuminata	28.11	7.00e-26	111.00
IUUC-Mpu-066031	Mustela putorius furo	94.72	3.00e-174	603.00
IUUC-Nle-069080	Nomascus leucogenys	92.38	4.00e-170	590.00
IUUC-Opr-070787	Ochotona princeps	88.56	5.00e-160	556.00
IUUC-Ont-071952	Oreochromis niloticus	53.73	2.00e-104	372.00
IUUC-Oan-073334	Ornithorhynchus anatinus	81.92	1.00e-111	395.00
IUUC-Oba-075175	Oryza barthii	33.14	4.00e-26	112.00
IUUC-Obr-076393	Oryza brachyantha	33.73	5.00e-26	111.00
IUUC-Ogl-077603	Oryza glaberrima	38.18	2.00e-18	86.30
IUUC-Ogu-078211	Oryza glumaepatula	33.14	4.00e-26	112.00
IUUC-Oin-079554	Oryza indica	33.14	2.00e-26	112.00
IUUC-Olo-080922	Oryza longistaminata	34.23	1.00e-22	100.00
IUUC-Ome-081127	Oryza meridionalis	25.42	5.00e-13	69.30
IUUC-Oni-082376	Oryza nivara	33.14	4.00e-26	112.00
IUUC-Opu-083163	Oryza punctata	32.54	1.00e-25	110.00
IUUC-Oru-084311	Oryza rufipogon	33.14	6.00e-26	111.00
IUUC-Osa-085762	Oryza sativa	38.18	2.00e-18	85.90
IUUC-Oga-088804	Otolemur garnettii	92.67	3.00e-171	593.00
IUUC-Oar-090095	Ovis aries	91.79	3.00e-168	583.00
IUUC-Ptr-090731	Pan troglodytes	93.26	9.00e-172	595.00
IUUC-Pan-092595	Papio anubis	92.69	4.00e-170	590.00
IUUC-Psi-093866	Pelodiscus sinensis	68.65	2.00e-113	402.00
IUUC-Pma-094236	Petromyzon marinus	59.88	5.00e-113	400.00
IUUC-Pfo-096095	Poecilia formosa	54.35	6.00e-101	360.00
IUUC-Pab-098385	Pongo abelii	92.67	2.00e-171	594.00
IUUC-Pop-099433	Populus trichocarpa	27.52	1.00e-27	117.00
IUUC-Pca-101119	Procavia capensis	95.35	3.00e-114	404.00
IUUC-Ppe-101677	Prunus persica	28.11	9.00e-26	110.00
IUUC-Pva-102726	Pteropus vampyrus	93.84	1.00e-173	602.00
IUUC-Rno-105576	Rattus norvegicus	91.79	1.00e-168	585.00
IUUC-Sha-106774	Sarcophilus harrisii	88.72	1.00e-151	528.00
IUUC-Sit-109988	Setaria italica	27.68	4.00e-28	118.00
IUUC-Sly-110864	Solanum lycopersicum	28.83	6.00e-27	115.00
IUUC-Sar-113060	Sorex araneus	84.03	7.00e-122	429.00
IUUC-Sbi-114699	Sorghum bicolor	28.95	7.00e-29	121.00
IUUC-Ssc-116445	Sus scrofa	94.72	1.00e-174	605.00
IUUC-Tru-117834	Takifugu rubripes	56.21	3.00e-109	388.00
IUUC-Tni-119651	Tetraodon nigroviridis	55.28	3.00e-108	384.00
IUUC-Tca-121318	Theobroma cacao	27.46	9.00e-26	110.00
IUUC-Tae-124184	Triticum aestivum	30.12	2.00e-30	126.00
IUUC-Tur-126226	Triticum urartu	32.77	3.00e-27	115.00
IUUC-Tbe-128079	Tupaia belangeri	78.20	9.00e-106	375.00
IUUC-Ttr-128391	Tursiops truncatus	88.89	9.00e-160	555.00
IUUC-Vvi-131148	Vitis vinifera	26.51	3.00e-24	105.00
IUUC-Xtr-132743	Xenopus tropicalis	61.72	1.00e-114	405.00
IUUC-Xma-133722	Xiphophorus maculatus	54.66	1.00e-105	375.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence