iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069080

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01048387

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000009548.2	ENSNLET00000012215.2	ENSNLEP00000011641.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-13	50.7	166	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + +++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAKEVQT 205
           8**********98559******************998875 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MERPVPLAVP LGQTEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPVV TFQAHDGPIY SMVSTDRHLL SAGDGEVKAW LWAEMLKKGC KELWRRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAC CTGTGCCGCT GGCGGTGCCT CTGGGTCAGG TGAGACGGAC GTGGTGCGCG 60
TTGCCTTCTG GGGTTTGTAG TCCACGCATG GCTGGGACGG GGCGGGCAGG GAATCGTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

KEGG

nle:100587297

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.84	7.00e-30	124.00
IUUC-Aml-001693	Ailuropoda melanoleuca	96.19	3.00e-180	624.00
IUUC-Atr-002699	Amborella trichopoda	29.20	3.00e-23	102.00
IUUC-Aca-004231	Anolis carolinensis	70.95	5.00e-127	447.00
IUUC-Aly-006385	Arabidopsis lyrata	31.23	1.00e-28	120.00
IUUC-Ath-006723	Arabidopsis thaliana	30.36	7.00e-29	121.00
IUUC-Ame-010813	Astyanax mexicanus	65.12	3.00e-89	320.00
IUUC-Bta-013458	Bos taurus	95.31	3.00e-178	617.00
IUUC-Bdi-014935	Brachypodium distachyon	29.44	8.00e-30	124.00
IUUC-Bol-015442	Brassica oleracea	30.82	3.00e-29	122.00
IUUC-Bra-017807	Brassica rapa	30.72	2.00e-29	122.00
IUUC-Cja-019061	Callithrix jacchus	97.66	0.00e+00	629.00
IUUC-Cfa-021146	Canis familiaris	96.77	0.00e+00	626.00
IUUC-Cpo-022512	Cavia porcellus	95.60	5.00e-180	623.00
IUUC-Csa-023055	Chlorocebus sabaeus	97.65	0.00e+00	637.00
IUUC-Cho-024693	Choloepus hoffmanni	95.88	1.00e-99	355.00
IUUC-Cin-025181	Ciona intestinalis	36.65	6.00e-58	217.00
IUUC-Csv-025852	Ciona savignyi	35.22	1.00e-49	189.00
IUUC-Dre-028221	Danio rerio	59.94	7.00e-119	419.00
IUUC-Dno-029200	Dasypus novemcinctus	91.01	9.00e-89	318.00
IUUC-Dor-030863	Dipodomys ordii	94.72	1.00e-177	615.00
IUUC-Dme-032016	Drosophila melanogaster	29.06	1.00e-37	150.00
IUUC-Eca-034363	Equus caballus	96.48	0.00e+00	627.00
IUUC-Fca-036546	Felis catus	96.19	0.00e+00	625.00
IUUC-Gmo-038513	Gadus morhua	56.76	6.00e-109	387.00
IUUC-Gac-042606	Gasterosteus aculeatus	57.45	3.00e-112	397.00
IUUC-Gma-043171	Glycine max	28.52	2.00e-32	132.00
IUUC-Ggo-044877	Gorilla gorilla	98.83	0.00e+00	641.00
IUUC-Hsa-045813	Homo sapiens	98.83	0.00e+00	642.00
IUUC-Hvu-047782	Hordeum vulgare	30.41	2.00e-20	91.70
IUUC-Itr-047876	Ictidomys tridecemlineatus	96.48	0.00e+00	627.00
IUUC-Lch-049506	Latimeria chalumnae	64.13	1.00e-119	422.00
IUUC-Lpe-051203	Leersia perrieri	29.83	9.00e-25	107.00
IUUC-Loc-052451	Lepisosteus oculatus	51.23	2.00e-89	322.00
IUUC-Laf-053864	Loxodonta africana	95.01	3.00e-177	613.00
IUUC-Mcc-055705	Macaca mulatta	90.12	6.00e-157	546.00
IUUC-Meu-055926	Macropus eugenii	90.52	1.00e-156	545.00
IUUC-Mtr-058556	Medicago truncatula	28.83	1.00e-31	130.00
IUUC-Mmr-060836	Microcebus murinus	96.77	0.00e+00	629.00
IUUC-Mdo-062534	Monodelphis domestica	90.52	1.00e-155	541.00
IUUC-Mmu-063560	Mus musculus	94.72	1.00e-177	615.00
IUUC-Mac-065134	Musa acuminata	28.23	2.00e-26	113.00
IUUC-Mpu-066031	Mustela putorius furo	97.36	0.00e+00	631.00
IUUC-Mlu-068051	Myotis lucifugus	92.38	3.00e-170	590.00
IUUC-Opr-070787	Ochotona princeps	91.50	5.00e-168	583.00
IUUC-Ont-071952	Oreochromis niloticus	56.21	8.00e-111	393.00
IUUC-Oan-073334	Ornithorhynchus anatinus	85.77	2.00e-118	418.00
IUUC-Oba-075175	Oryza barthii	30.39	1.00e-25	110.00
IUUC-Obr-076393	Oryza brachyantha	30.94	1.00e-25	110.00
IUUC-Ogl-077603	Oryza glaberrima	35.59	7.00e-19	87.40
IUUC-Ogu-078211	Oryza glumaepatula	30.39	1.00e-25	110.00
IUUC-Oin-079554	Oryza indica	30.39	6.00e-26	111.00
IUUC-Olo-080922	Oryza longistaminata	31.68	3.00e-23	102.00
IUUC-Ome-081127	Oryza meridionalis	23.76	2.00e-12	67.40
IUUC-Oni-082376	Oryza nivara	30.39	1.00e-25	110.00
IUUC-Opu-083163	Oryza punctata	29.83	3.00e-25	108.00
IUUC-Oru-084311	Oryza rufipogon	30.39	2.00e-25	110.00
IUUC-Osa-085762	Oryza sativa	35.59	1.00e-18	87.00
IUUC-Oga-088804	Otolemur garnettii	95.60	4.00e-179	620.00
IUUC-Oar-090095	Ovis aries	94.72	2.00e-177	614.00
IUUC-Ptr-090731	Pan troglodytes	99.12	0.00e+00	642.00
IUUC-Pan-092595	Papio anubis	98.25	0.00e+00	635.00
IUUC-Psi-093866	Pelodiscus sinensis	70.20	1.00e-117	415.00
IUUC-Pma-094236	Petromyzon marinus	59.57	6.00e-117	413.00
IUUC-Pfo-096095	Poecilia formosa	56.21	2.00e-106	378.00
IUUC-Pab-098385	Pongo abelii	98.24	0.00e+00	639.00
IUUC-Pop-099433	Populus trichocarpa	27.24	3.00e-29	122.00
IUUC-Pca-101119	Procavia capensis	95.89	1.00e-116	412.00
IUUC-Ppe-101677	Prunus persica	28.63	7.00e-27	114.00
IUUC-Pva-102726	Pteropus vampyrus	95.89	9.00e-180	622.00
IUUC-Rno-105576	Rattus norvegicus	95.31	8.00e-179	619.00
IUUC-Sha-106774	Sarcophilus harrisii	91.13	2.00e-157	548.00
IUUC-Sit-109988	Setaria italica	28.12	7.00e-28	117.00
IUUC-Sly-110864	Solanum lycopersicum	30.56	2.00e-29	123.00
IUUC-Sar-113060	Sorex araneus	86.69	6.00e-128	449.00
IUUC-Sbi-114699	Sorghum bicolor	29.43	1.00e-28	120.00
IUUC-Ssc-116445	Sus scrofa	96.48	0.00e+00	628.00
IUUC-Tru-117834	Takifugu rubripes	56.97	3.00e-115	407.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.45	5.00e-114	403.00
IUUC-Tca-121318	Theobroma cacao	27.42	5.00e-28	118.00
IUUC-Tae-124184	Triticum aestivum	29.84	7.00e-30	124.00
IUUC-Tur-126226	Triticum urartu	30.39	1.00e-26	113.00
IUUC-Tbe-128079	Tupaia belangeri	80.52	3.00e-106	377.00
IUUC-Ttr-128391	Tursiops truncatus	91.23	3.00e-168	583.00
IUUC-Vvi-131148	Vitis vinifera	27.02	8.00e-25	107.00
IUUC-Xtr-132743	Xenopus tropicalis	62.61	2.00e-117	415.00
IUUC-Xma-133722	Xiphophorus maculatus	56.52	3.00e-111	394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence