iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099979

Ensembl Protein ID

POPTR_0008s16100.1

UniProt Accession

A9PIH9; A9PIH9_POPTR

Genbank Protein ID

ABK96182.1; ERP57661.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

EF148202; CM000344

Gene Name

POPTR_0008s16100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s16100	POPTR_0008s16100.2	POPTR_0008s16100.2
POPTR_0008s16100	POPTR_0008s16100.1	POPTR_0008s16100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.40e-19	71.2	130	215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + vkvs++g+++++++dl+++ ++ +Llka++  ++          ++k+se+a++YeD+dGD++ l++D+++d+++s      s+++l+i
   Q: 130  MYVKVSMDGAPYLRKIDLKVYKGYPELLKALENmFKltigeysereGYKGSEYAPTYEDKDGDWM-LVGDVPWDMFLS------SCKKLRI 213
           579******************************73366999999*9*******************.************......******* PP
   S: 82   qk 83
           +k
   Q: 214  MK 215
           *8 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEGGVAYEND LNLKETELRL GLPGTGCTNE KGVSGARNNK RPFPETREEG GANGKSDAQH 60
DDQETASAPK VQIVGWPPIR SYRKNSFQPK KAEDEAAAGM VQIVGWPPIR SYRKNSLQPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCCTCAAA GGTGCTGCTA TTGCGACCGA CAGGCTTAGC TTGCCTTCGT CCATAATTCA 60
TGCATTTGAA GAGAATAGCA GGGATTTTTC TCAACCTCTT CTTTTTATAT ATAAAATACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ggo-045067	Gorilla gorilla	31.58	2.40e-01	28.50
IUUC-Lpe-051475	Leersia perrieri	48.89	8.00e-42	162.00
IUUC-Meu-056851	Macropus eugenii	26.56	8.80e-01	27.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence