iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049325

Ensembl Protein ID

CAY67347

UniProt Accession

C4QVS4; C4QVS4_KOMPG

Genbank Protein ID

CAY67347.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

FN392319

Gene Name

TIF34; PAS_chr1-3_0281

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-3_0281	CAY67347	CAY67347

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-21	71.2	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ +++++  ++ t+ ++Gs D + k+W++ tg ++
   Q: 50   GHSGAISAIDIdPTtTFAITGSADFSAKLWRVETGECI 87
           8***********777999*****************997 PP

Organism

Komagataella pastoris

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLKGHE RPLSQVKFNR DGDLLFSVSK DSVASIWYSS NGERLGTLNG HSGAISAIDI 60
DPTTTFAITG SADFSAKLWR VETGECIFTW NTVTPVRGVE FNKDASKVLV LTAEVMGHPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACCAA TTTTACTGAA GGGACATGAG CGTCCTCTGT CTCAGGTCAA ATTCAACAGA 60
GATGGAGACT TGCTATTTTC GGTCTCCAAG GATTCGGTAG CAAGTATTTG GTACTCTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

KEGG

ppa:PAS_chr1-3_0281

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	28.96	2.00e-28	117.00
IUUC-Aml-001321	Ailuropoda melanoleuca	44.31	2.00e-83	299.00
IUUC-Atr-002468	Amborella trichopoda	47.96	6.00e-47	178.00
IUUC-Apl-003841	Anas platyrhynchos	44.79	6.00e-86	308.00
IUUC-Aca-005123	Anolis carolinensis	45.40	3.00e-87	313.00
IUUC-Aly-006532	Arabidopsis lyrata	42.20	1.00e-76	277.00
IUUC-Ath-007094	Arabidopsis thaliana	42.81	8.00e-78	281.00
IUUC-Ago-008000	Ashbya gossypii	54.41	7.00e-111	391.00
IUUC-Acl-008098	Aspergillus clavatus	56.68	3.00e-113	399.00
IUUC-Afl-008494	Aspergillus flavus	57.83	7.00e-117	411.00
IUUC-Afu-009080	Aspergillus fumigatus	56.38	8.00e-114	400.00
IUUC-Ani-009230	Aspergillus nidulans	59.10	3.00e-115	405.00
IUUC-Aor-010114	Aspergillus oryzae	57.83	7.00e-117	411.00
IUUC-Ate-010285	Aspergillus terreus	57.06	2.00e-114	403.00
IUUC-Ame-011534	Astyanax mexicanus	43.37	4.00e-85	305.00
IUUC-Bgr-012121	Blumeria graminis	50.88	6.00e-101	358.00
IUUC-Bta-013143	Bos taurus	44.48	4.00e-84	302.00
IUUC-Bci-013950	Botrytis cinerea	55.09	3.00e-110	389.00
IUUC-Bdi-015019	Brachypodium distachyon	45.57	6.00e-81	291.00
IUUC-Bol-015709	Brassica oleracea	43.77	2.00e-78	284.00
IUUC-Bra-017760	Brassica rapa	43.77	1.00e-78	285.00
IUUC-Cel-018226	Caenorhabditis elegans	41.03	2.00e-74	270.00
IUUC-Cja-019741	Callithrix jacchus	44.17	6.00e-84	301.00
IUUC-Cfa-021204	Canis familiaris	44.17	2.00e-83	299.00
IUUC-Cpo-021661	Cavia porcellus	44.31	1.00e-83	300.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	43.30	8.00e-79	284.00
IUUC-Csa-024038	Chlorocebus sabaeus	44.17	6.00e-84	301.00
IUUC-Cin-025597	Ciona intestinalis	43.77	5.00e-91	325.00
IUUC-Csv-026287	Ciona savignyi	28.89	1.00e-26	111.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	53.01	2.00e-102	362.00
IUUC-Cne-026838	Cryptococcus neoformans	49.24	2.00e-94	337.00
IUUC-Cme-027304	Cyanidioschyzon merolae	42.11	4.00e-74	269.00
IUUC-Dre-028567	Danio rerio	43.87	7.00e-86	308.00
IUUC-Dno-029171	Dasypus novemcinctus	44.17	8.00e-83	298.00
IUUC-Dor-030257	Dipodomys ordii	32.58	4.00e-25	106.00
IUUC-Dse-031191	Dothistroma septosporum	52.52	3.00e-100	355.00
IUUC-Dme-031879	Drosophila melanogaster	43.56	1.00e-78	283.00
IUUC-Ete-032336	Echinops telfairi	39.42	2.00e-40	156.00
IUUC-Eca-033259	Equus caballus	44.00	5.00e-83	298.00
IUUC-Eeu-035153	Erinaceus europaeus	37.84	8.00e-26	108.00
IUUC-Fca-036489	Felis catus	44.00	5.00e-83	298.00
IUUC-Fal-037485	Ficedula albicollis	44.79	3.00e-86	309.00
IUUC-Fox-037860	Fusarium oxysporum	53.15	1.00e-105	374.00
IUUC-Fso-038188	Fusarium solani	53.31	1.00e-102	363.00
IUUC-Gmo-039311	Gadus morhua	43.38	9.00e-84	301.00
IUUC-Ggr-040045	Gaeumannomyces graminis	54.36	4.00e-111	392.00
IUUC-Gga-040645	Gallus gallus	44.01	1.00e-84	304.00
IUUC-Gac-042086	Gasterosteus aculeatus	43.73	6.00e-84	301.00
IUUC-Gma-043246	Glycine max	46.18	3.00e-81	292.00
IUUC-Ggo-045578	Gorilla gorilla	44.17	6.00e-84	301.00
IUUC-Hsa-046734	Homo sapiens	44.17	6.00e-84	301.00
IUUC-Hvu-047553	Hordeum vulgare	45.26	2.00e-80	290.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	43.69	1.00e-82	297.00
IUUC-Lch-049620	Latimeria chalumnae	43.48	2.00e-74	270.00
IUUC-Lpe-051338	Leersia perrieri	43.77	2.00e-72	263.00
IUUC-Loc-052094	Lepisosteus oculatus	41.39	1.00e-72	264.00
IUUC-Lma-053047	Leptosphaeria maculans	55.86	2.00e-108	383.00
IUUC-Laf-053801	Loxodonta africana	43.75	1.00e-80	290.00
IUUC-Mcc-055498	Macaca mulatta	38.65	5.00e-64	235.00
IUUC-Meu-056729	Macropus eugenii	40.49	4.00e-76	275.00
IUUC-Mor-057025	Magnaporthe oryzae	54.95	6.00e-108	381.00
IUUC-Mpo-057511	Magnaporthe poae	54.36	2.00e-109	386.00
IUUC-Mtr-058051	Medicago truncatula	46.18	1.00e-80	290.00
IUUC-Mla-059061	Melampsora laricipopulina	49.54	2.00e-95	340.00
IUUC-Mga-059229	Meleagris gallopavo	44.21	2.00e-83	300.00
IUUC-Mvi-060399	Microbotryum violaceum	47.46	2.00e-86	310.00
IUUC-Mmr-060764	Microcebus murinus	44.48	1.00e-84	303.00
IUUC-Mdo-062088	Monodelphis domestica	44.00	1.00e-84	304.00
IUUC-Mmu-064304	Mus musculus	44.17	3.00e-84	302.00
IUUC-Mac-065520	Musa acuminata	46.08	9.00e-80	287.00
IUUC-Mpu-066340	Mustela putorius furo	44.00	5.00e-83	298.00
IUUC-Mlu-067111	Myotis lucifugus	44.17	9.00e-84	301.00
IUUC-Nfi-068478	Neosartorya fischeri	56.68	3.00e-114	402.00
IUUC-Ncr-068820	Neurospora crassa	54.82	2.00e-106	376.00
IUUC-Nle-069903	Nomascus leucogenys	43.87	2.00e-83	300.00
IUUC-Opr-070221	Ochotona princeps	43.87	1.00e-82	297.00
IUUC-Ont-071765	Oreochromis niloticus	44.79	8.00e-88	314.00
IUUC-Oan-073660	Ornithorhynchus anatinus	42.57	7.00e-70	254.00
IUUC-Ocu-074039	Oryctolagus cuniculus	44.00	3.00e-83	299.00
IUUC-Oba-075395	Oryza barthii	40.37	2.00e-65	240.00
IUUC-Obr-076334	Oryza brachyantha	43.73	3.00e-75	273.00
IUUC-Ogl-077751	Oryza glaberrima	45.57	8.00e-81	291.00
IUUC-Ogu-078207	Oryza glumaepatula	45.87	3.00e-81	293.00
IUUC-Oin-079878	Oryza indica	45.87	4.00e-81	292.00
IUUC-Olo-080677	Oryza longistaminata	34.99	4.00e-57	213.00
IUUC-Ome-081228	Oryza meridionalis	36.60	4.00e-35	139.00
IUUC-Oni-082411	Oryza nivara	40.67	2.00e-64	236.00
IUUC-Opu-083136	Oryza punctata	45.26	3.00e-80	289.00
IUUC-Oru-084916	Oryza rufipogon	44.35	1.00e-78	284.00
IUUC-Osa-085454	Oryza sativa	45.87	4.00e-81	292.00
IUUC-Ola-087053	Oryzias latipes	45.87	1.00e-88	317.00
IUUC-Olu-087602	Ostreococcus lucimarinus	46.30	2.00e-84	303.00
IUUC-Oga-088154	Otolemur garnettii	44.00	2.00e-83	300.00
IUUC-Oar-089915	Ovis aries	44.31	2.00e-83	300.00
IUUC-Ptr-091124	Pan troglodytes	38.51	6.00e-59	218.00
IUUC-Pan-092035	Papio anubis	44.17	6.00e-84	301.00
IUUC-Psi-094096	Pelodiscus sinensis	42.92	2.00e-51	192.00
IUUC-Pma-094255	Petromyzon marinus	29.21	9.00e-22	95.10
IUUC-Pno-094988	Phaeosphaeria nodorum	50.44	1.00e-92	330.00
IUUC-Ppa-095949	Physcomitrella patens	45.57	3.00e-81	292.00
IUUC-Pfo-096101	Poecilia formosa	45.40	2.00e-87	313.00
IUUC-Pab-097726	Pongo abelii	44.17	6.00e-84	301.00
IUUC-Pop-099665	Populus trichocarpa	43.73	6.00e-78	281.00
IUUC-Pca-101014	Procavia capensis	44.48	3.00e-84	303.00
IUUC-Ppe-101320	Prunus persica	44.34	7.00e-79	285.00
IUUC-Pva-102789	Pteropus vampyrus	40.80	2.00e-74	270.00
IUUC-Pgr-103479	Puccinia graminis	48.61	7.00e-94	335.00
IUUC-Ptt-103981	Puccinia triticina	48.30	1.00e-92	330.00
IUUC-Pte-104278	Pyrenophora teres	53.39	3.00e-106	375.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	53.39	3.00e-106	375.00
IUUC-Rno-105867	Rattus norvegicus	39.65	5.00e-71	258.00
IUUC-Sce-106251	Saccharomyces cerevisiae	55.30	2.00e-114	402.00
IUUC-Sha-107039	Sarcophilus harrisii	43.73	7.00e-85	305.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	54.08	2.00e-111	393.00
IUUC-Spo-108314	Schizosaccharomyces pombe	53.66	6.00e-110	388.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	54.52	5.00e-109	385.00
IUUC-Smo-108728	Selaginella moellendorffii	45.57	2.00e-79	286.00
IUUC-Sit-110801	Setaria italica	44.95	7.00e-80	288.00
IUUC-Sly-111326	Solanum lycopersicum	46.79	2.00e-81	293.00
IUUC-Stu-112458	Solanum tuberosum	46.18	1.00e-80	290.00
IUUC-Sbi-114063	Sorghum bicolor	44.95	1.00e-79	287.00
IUUC-Sre-115096	Sporisorium reilianum	47.02	4.00e-88	315.00
IUUC-Ssc-116080	Sus scrofa	44.48	4.00e-84	302.00
IUUC-Tgu-116988	Taeniopygia guttata	45.09	1.00e-86	310.00
IUUC-Tru-118766	Takifugu rubripes	44.34	3.00e-86	309.00
IUUC-Tni-120197	Tetraodon nigroviridis	44.48	1.00e-86	310.00
IUUC-Tca-121316	Theobroma cacao	46.79	3.00e-81	292.00
IUUC-Tre-122097	Trichoderma reesei	52.85	7.00e-107	377.00
IUUC-Tvi-122442	Trichoderma virens	52.85	6.00e-107	378.00
IUUC-Tae-125542	Triticum aestivum	44.98	3.00e-80	289.00
IUUC-Tur-126334	Triticum urartu	39.45	6.00e-63	231.00
IUUC-Tme-127038	Tuber melanosporum	55.12	3.00e-112	395.00
IUUC-Ttr-128659	Tursiops truncatus	42.94	4.00e-68	249.00
IUUC-Uma-129464	Ustilago maydis	47.62	6.00e-89	318.00
IUUC-Vda-129841	Verticillium dahliae	55.42	1.00e-107	380.00
IUUC-Vpa-130382	Vicugna pacos	26.75	2.00e-17	80.90
IUUC-Vvi-131076	Vitis vinifera	45.26	2.00e-79	286.00
IUUC-Xtr-132395	Xenopus tropicalis	44.79	2.00e-85	306.00
IUUC-Xma-133383	Xiphophorus maculatus	45.40	2.00e-87	313.00
IUUC-Yli-134586	Yarrowia lipolytica	57.61	3.00e-108	382.00
IUUC-Zma-135667	Zea mays	45.26	4.00e-80	288.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence