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Tag Content
UUCD2 ID IUUC-Cre-022969
UUCD1 version UUC-ChR-00069
Ensembl Protein ID EDP08940
UniProt Accession A8HRR9; A8HRR9_CHLRE
Genbank Protein ID EDP08940.1
Protein Name Coatomer subunit alpha
Genbank Nucleotide ID DS496109
Gene Name COPA1; CHLREDRAFT_195437
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
CHLREDRAFT_195437 EDP08940 EDP08940
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-37 126.0 91 127
UBD/Beta-Prp 8.30e-77 257.8 3 323
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d ++ ++f ++ + +vs+sdD ti++W++ + ++
   Q: 91   GHLDYIRTVQFhHEyPWIVSASDDQTIRIWNWQSRTC 127
           8**********987899**************987766 PP
   

   UBD/Beta-Prp
   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           t +++++++++ + f+p++++++++  +g +++wd+++g+l+ ++ +h+++v+ v f+++++++v+g++D+ ik+w+++ + c+ tl gh d++++++f+ 
   Q: 3    TKFETKSNRVKGLSFHPKRPWVLASLHSGVVQLWDYRMGTLIDRFDEHDGPVRGVHFHKSQPLFVSGGDDYKIKIWNYKLRRCLFTLLGHLDYIRTVQFHH 103
           67889999********************************************************************************************* PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl................ktgkllrtl............tg 177
           +  ++vs+s+d+tir+w++++++c++ +l+gh++ v+c+ +hp+++l+vs+slD+tvr+Wd+                ++ ++  +l            +g
   Q: 104  EYPWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCAMFHPKEDLVVSASLDQTVRVWDIgglrkktvapggedvlRMPQMNADLfgggdavvkyvlEG 203
           **************************.***************************************************55555555556666666666366 PP
   S: 178  ghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfg 276
            h++ v++ +f+++ + +vsg++d++vklw +  ++   v+tl+ght+nv++v f+ ++++++s s+D+sir+Wd+ +++ ++t+ +++++++  a  +++
   Q: 204  -HDRGVNWAAFHPTLPLIVSGADDRQVKLWRYNGNKAweVDTLRGHTNNVSCVMFHARQDLIISNSEDKSIRVWDMSKRTGVQTFRREHDRFWILAS-HPE 302
           .*******************************9555567*********************************************************9.666 PP
   S: 277  dnvlvlgsedskvniwklkkne 298
            n l++g  d+   ++kl++++
   Q: 303  INLLAAG-HDGGMIVFKLERER 323
           6655555.67899999998776 PP
   
Organism Chlamydomonas reinhardtii
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
Protein Sequence
(Fasta)
MLTKFETKSN RVKGLSFHPK RPWVLASLHS GVVQLWDYRM GTLIDRFDEH DGPVRGVHFH 60
KSQPLFVSGG DDYKIKIWNY KLRRCLFTLL GHLDYIRTVQ FHHEYPWIVS ASDDQTIRIW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cre-022969|E3,WD_repeat;UBD,Beta-Prp|Chlamydomonas reinhardtii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTTGCTTCCC CTCCCAGCGT TTACATAAAA GGGGTAGCGC CAAGTTGCTA CCCGAGAACC 60
AGATCAAGGG AACCTTGTTG CAATAGGCCA AACGCTTCTC TATAGCAAGT TACTGCATAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cre-022969|E3,WD_repeat;UBD,Beta-Prp|Chlamydomonas reinhardtii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER
KEGG cre:CHLREDRAFT_195437
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000064 Aegilops tauschii 69.47 0.00e+00 1254.00
IUUC-Aml-001758 Ailuropoda melanoleuca 63.88 0.00e+00 1125.00
IUUC-Atr-002493 Amborella trichopoda 72.48 0.00e+00 1279.00
IUUC-Apl-003385 Anas platyrhynchos 59.06 0.00e+00 807.00
IUUC-Aca-005154 Anolis carolinensis 78.74 6.00e-100 354.00
IUUC-Aly-006020 Arabidopsis lyrata 71.26 0.00e+00 1251.00
IUUC-Ath-007058 Arabidopsis thaliana 71.38 0.00e+00 1255.00
IUUC-Ago-007992 Ashbya gossypii 50.00 0.00e+00 865.00
IUUC-Acl-008027 Aspergillus clavatus 55.90 0.00e+00 1001.00
IUUC-Afl-008644 Aspergillus flavus 56.26 0.00e+00 995.00
IUUC-Afu-008964 Aspergillus fumigatus 56.26 0.00e+00 1007.00
IUUC-Ani-009379 Aspergillus nidulans 56.26 0.00e+00 1010.00
IUUC-Ang-009756 Aspergillus niger 56.38 0.00e+00 1009.00
IUUC-Aor-010174 Aspergillus oryzae 56.26 0.00e+00 995.00
IUUC-Ate-010302 Aspergillus terreus 55.78 0.00e+00 1000.00
IUUC-Ame-011229 Astyanax mexicanus 63.60 0.00e+00 1105.00
IUUC-Bgr-012300 Blumeria graminis 55.60 0.00e+00 930.00
IUUC-Bta-012524 Bos taurus 64.57 0.00e+00 1134.00
IUUC-Bci-013781 Botrytis cinerea 57.09 0.00e+00 1004.00
IUUC-Bdi-014214 Brachypodium distachyon 68.87 0.00e+00 1241.00
IUUC-Bol-015925 Brassica oleracea 71.02 0.00e+00 1248.00
IUUC-Bra-016978 Brassica rapa 70.90 0.00e+00 1245.00
IUUC-Cel-018115 Caenorhabditis elegans 54.93 0.00e+00 949.00
IUUC-Cja-019107 Callithrix jacchus 62.77 0.00e+00 1099.00
IUUC-Cfa-020675 Canis familiaris 63.49 0.00e+00 1097.00
IUUC-Cpo-021813 Cavia porcellus 64.68 0.00e+00 1134.00
IUUC-Csa-023523 Chlorocebus sabaeus 64.68 0.00e+00 1134.00
IUUC-Cho-024704 Choloepus hoffmanni 69.38 3.00e-135 474.00
IUUC-Cin-025572 Ciona intestinalis 60.24 0.00e+00 1059.00
IUUC-Csv-025864 Ciona savignyi 59.88 0.00e+00 1016.00
IUUC-Cgl-026510 Colletotrichum gloeosporioides 56.73 0.00e+00 1012.00
IUUC-Cne-027053 Cryptococcus neoformans 58.16 0.00e+00 1027.00
IUUC-Cme-027222 Cyanidioschyzon merolae 41.68 1.00e-148 519.00
IUUC-Dre-027421 Danio rerio 53.59 0.00e+00 1319.00
IUUC-Dno-029303 Dasypus novemcinctus 64.80 0.00e+00 1141.00
IUUC-Dor-030290 Dipodomys ordii 53.46 7.00e-171 593.00
IUUC-Dse-031543 Dothistroma septosporum 55.07 0.00e+00 953.00
IUUC-Dme-031945 Drosophila melanogaster 61.79 0.00e+00 1037.00
IUUC-Ete-032873 Echinops telfairi 60.94 0.00e+00 1056.00
IUUC-Eca-033773 Equus caballus 64.57 0.00e+00 1134.00
IUUC-Eeu-034874 Erinaceus europaeus 47.56 8.00e-117 413.00
IUUC-Fca-035739 Felis catus 63.52 0.00e+00 1116.00
IUUC-Fal-037263 Ficedula albicollis 60.05 0.00e+00 996.00
IUUC-Fox-037738 Fusarium oxysporum 57.33 0.00e+00 1019.00
IUUC-Fso-038153 Fusarium solani 56.62 0.00e+00 1012.00
IUUC-Gmo-039602 Gadus morhua 50.16 0.00e+00 1204.00
IUUC-Ggr-039931 Gaeumannomyces graminis 56.26 0.00e+00 1008.00
IUUC-Gga-040590 Gallus gallus 64.92 0.00e+00 1137.00
IUUC-Gac-041318 Gasterosteus aculeatus 64.23 0.00e+00 1120.00
IUUC-Gma-043257 Glycine max 70.57 0.00e+00 1271.00
IUUC-Ggo-045029 Gorilla gorilla 64.00 0.00e+00 1126.00
IUUC-Hsa-046078 Homo sapiens 64.00 0.00e+00 1126.00
IUUC-Hvu-047556 Hordeum vulgare 68.51 0.00e+00 1237.00
IUUC-Itr-048881 Ictidomys tridecemlineatus 54.80 6.00e-146 509.00
IUUC-Kpa-049256 Komagataella pastoris 52.13 0.00e+00 915.00
IUUC-Lch-049706 Latimeria chalumnae 64.44 0.00e+00 1122.00
IUUC-Lpe-051316 Leersia perrieri 69.59 0.00e+00 1255.00
IUUC-Loc-051867 Lepisosteus oculatus 50.11 0.00e+00 818.00
IUUC-Lma-053138 Leptosphaeria maculans 57.09 0.00e+00 1020.00
IUUC-Laf-053510 Loxodonta africana 54.93 0.00e+00 1360.00
IUUC-Mcc-055836 Macaca mulatta 64.00 0.00e+00 1126.00
IUUC-Meu-056238 Macropus eugenii 57.35 0.00e+00 780.00
IUUC-Mor-057172 Magnaporthe oryzae 55.83 0.00e+00 999.00
IUUC-Mpo-057300 Magnaporthe poae 56.26 0.00e+00 1009.00
IUUC-Mtr-058248 Medicago truncatula 70.31 0.00e+00 1262.00
IUUC-Mla-059019 Melampsora laricipopulina 58.79 0.00e+00 1070.00
IUUC-Mga-059499 Meleagris gallopavo 64.77 0.00e+00 1132.00
IUUC-Mvi-060336 Microbotryum violaceum 60.26 0.00e+00 1087.00
IUUC-Mmr-061102 Microcebus murinus 64.00 0.00e+00 1127.00
IUUC-Mdo-062594 Monodelphis domestica 55.12 0.00e+00 1362.00
IUUC-Mmu-063736 Mus musculus 63.88 0.00e+00 1127.00
IUUC-Mac-065398 Musa acuminata 65.91 0.00e+00 1150.00
IUUC-Mpu-066701 Mustela putorius furo 64.80 0.00e+00 1141.00
IUUC-Mlu-067392 Myotis lucifugus 64.41 0.00e+00 1129.00
IUUC-Nfi-068270 Neosartorya fischeri 56.26 0.00e+00 1008.00
IUUC-Ncr-068892 Neurospora crassa 56.97 0.00e+00 1009.00
IUUC-Nle-069634 Nomascus leucogenys 66.81 0.00e+00 954.00
IUUC-Opr-070952 Ochotona princeps 53.12 1.00e-138 486.00
IUUC-Ont-072488 Oreochromis niloticus 63.96 0.00e+00 1108.00
IUUC-Ocu-074211 Oryctolagus cuniculus 64.68 0.00e+00 1135.00
IUUC-Oba-075761 Oryza barthii 69.35 0.00e+00 1251.00
IUUC-Obr-076429 Oryza brachyantha 68.75 0.00e+00 1243.00
IUUC-Ogl-077364 Oryza glaberrima 69.35 0.00e+00 1251.00
IUUC-Ogu-078257 Oryza glumaepatula 69.35 0.00e+00 1250.00
IUUC-Oin-079274 Oryza indica 69.23 0.00e+00 1249.00
IUUC-Olo-080466 Oryza longistaminata 69.16 0.00e+00 1245.00
IUUC-Ome-081993 Oryza meridionalis 70.38 0.00e+00 1178.00
IUUC-Oni-082874 Oryza nivara 69.35 0.00e+00 1249.00
IUUC-Opu-083370 Oryza punctata 69.59 0.00e+00 1254.00
IUUC-Oru-084274 Oryza rufipogon 69.23 0.00e+00 1248.00
IUUC-Osa-085841 Oryza sativa 69.47 0.00e+00 1251.00
IUUC-Ola-086921 Oryzias latipes 63.13 0.00e+00 1100.00
IUUC-Olu-087639 Ostreococcus lucimarinus 71.27 0.00e+00 1278.00
IUUC-Oga-087991 Otolemur garnettii 59.93 0.00e+00 1031.00
IUUC-Oar-089590 Ovis aries 64.45 0.00e+00 1132.00
IUUC-Ptr-090808 Pan troglodytes 64.00 0.00e+00 1126.00
IUUC-Pan-092475 Papio anubis 64.25 0.00e+00 1123.00
IUUC-Psi-093044 Pelodiscus sinensis 56.89 0.00e+00 915.00
IUUC-Pno-094839 Phaeosphaeria nodorum 56.00 0.00e+00 949.00
IUUC-Ppa-095785 Physcomitrella patens 74.76 0.00e+00 1351.00
IUUC-Pfo-097493 Poecilia formosa 64.44 0.00e+00 1113.00
IUUC-Pab-098497 Pongo abelii 64.68 0.00e+00 1134.00
IUUC-Pop-100086 Populus trichocarpa 72.36 0.00e+00 1274.00
IUUC-Pca-100413 Procavia capensis 61.66 0.00e+00 714.00
IUUC-Ppe-101899 Prunus persica 72.00 0.00e+00 1291.00
IUUC-Pva-102126 Pteropus vampyrus 60.38 0.00e+00 1049.00
IUUC-Pgr-103376 Puccinia graminis 59.62 0.00e+00 1069.00
IUUC-Ptt-103978 Puccinia triticina 52.90 0.00e+00 849.00
IUUC-Pte-104126 Pyrenophora teres 56.23 0.00e+00 968.00
IUUC-Pyt-104778 Pyrenophora triticirepentis 47.65 0.00e+00 635.00
IUUC-Rno-105428 Rattus norvegicus 64.57 0.00e+00 1134.00
IUUC-Sce-106464 Saccharomyces cerevisiae 49.05 0.00e+00 859.00
IUUC-Sha-107301 Sarcophilus harrisii 64.21 0.00e+00 1111.00
IUUC-Sja-107961 Schizosaccharomyces japonicus 53.15 0.00e+00 939.00
IUUC-Spo-108217 Schizosaccharomyces pombe 53.27 0.00e+00 953.00
IUUC-Ssl-108643 Sclerotinia sclerotiorum 57.09 0.00e+00 1005.00
IUUC-Smo-109458 Selaginella moellendorffii 73.77 0.00e+00 1324.00
IUUC-Sit-109697 Setaria italica 69.47 0.00e+00 1252.00
IUUC-Sly-111759 Solanum lycopersicum 72.48 0.00e+00 1304.00
IUUC-Stu-112564 Solanum tuberosum 72.24 0.00e+00 1301.00
IUUC-Sar-113313 Sorex araneus 46.37 2.00e-110 391.00
IUUC-Sbi-114388 Sorghum bicolor 69.35 0.00e+00 1251.00
IUUC-Sre-115209 Sporisorium reilianum 58.09 0.00e+00 1049.00
IUUC-Ssc-115933 Sus scrofa 64.57 0.00e+00 1134.00
IUUC-Tgu-117109 Taeniopygia guttata 50.38 1.00e-106 378.00
IUUC-Tru-117772 Takifugu rubripes 63.06 0.00e+00 1086.00
IUUC-Tsy-119105 Tarsius syrichta 58.59 0.00e+00 1006.00
IUUC-Tni-120556 Tetraodon nigroviridis 45.28 0.00e+00 652.00
IUUC-Tca-120918 Theobroma cacao 72.18 0.00e+00 1293.00
IUUC-Tre-121951 Trichoderma reesei 56.43 0.00e+00 1005.00
IUUC-Tvi-122359 Trichoderma virens 56.31 0.00e+00 1013.00
IUUC-Tae-123611 Triticum aestivum 69.47 0.00e+00 1254.00
IUUC-Tur-126754 Triticum urartu 69.35 0.00e+00 1255.00
IUUC-Tme-127170 Tuber melanosporum 47.77 0.00e+00 1179.00
IUUC-Tbe-127882 Tupaia belangeri 69.81 1.00e-131 462.00
IUUC-Ttr-128217 Tursiops truncatus 61.20 0.00e+00 1059.00
IUUC-Uma-129337 Ustilago maydis 57.85 0.00e+00 1044.00
IUUC-Vda-129828 Verticillium dahliae 55.36 0.00e+00 987.00
IUUC-Vpa-130537 Vicugna pacos 63.65 0.00e+00 1111.00
IUUC-Vvi-130958 Vitis vinifera 71.39 0.00e+00 1278.00
IUUC-Xtr-132857 Xenopus tropicalis 53.06 0.00e+00 1264.00
IUUC-Xma-133138 Xiphophorus maculatus 64.44 0.00e+00 1114.00
IUUC-Yli-134399 Yarrowia lipolytica 50.81 0.00e+00 865.00
IUUC-Zma-135612 Zea mays 68.27 0.00e+00 1228.00
Created Date 25-Jun-2017

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