iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098954

Ensembl Protein ID

POPTR_0014s13810.1

UniProt Accession

B9IA44; B9IA44_POPTR

Genbank Protein ID

EEE99385.1

Protein Name

Putative ARP2/3 protein complex subunit p41

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_824237; POPTR_0014s13810g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13810	POPTR_0014s13810.1	POPTR_0014s13810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-09	37.9	223	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.f....sd..tllvsGsdDgtikvWDlrtgv 34
           H++ ++c+  +    s+  t++++++ Dg++ vWDl  + 
   Q: 223  HENCISCIMsLtesgSSrkTRFSTSGLDGKVVVWDLENQE 262
           899999985379999444799**************97765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

NKFAVGSGAK TVCICYYEQD NNWWVSKLIR KRHDSSVTSV AWHPNNILLA TTSTDGKCRV 60
FSTFIKGVDT RDSKAGSVSD SKFGEQIVQL DLSFSWAFGV KWSPSGNTLA YVGHNSMIYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAAGTTCG CTGTTGGAAG TGGGGCTAAA ACTGTTTGTA TATGCTACTA TGAGCAAGAC 60
AACAACTGGT ACTTGCCCCA TAATTTGGAG CTTCTTAAGC ACTTAGTTCA TATTCTCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR011659--PD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF07676--PD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

pop:POPTR_0014s13810g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	58.70	2.00e-94	338.00
IUUC-Aml-002044	Ailuropoda melanoleuca	37.12	5.00e-40	157.00
IUUC-Atr-002844	Amborella trichopoda	81.77	3.00e-93	334.00
IUUC-Apl-003325	Anas platyrhynchos	37.50	8.00e-43	167.00
IUUC-Aca-004736	Anolis carolinensis	37.12	1.00e-42	166.00
IUUC-Aly-006568	Arabidopsis lyrata	79.78	2.00e-121	428.00
IUUC-Ath-006683	Arabidopsis thaliana	79.78	4.00e-122	430.00
IUUC-Ago-007966	Ashbya gossypii	33.46	2.00e-37	149.00
IUUC-Acl-008334	Aspergillus clavatus	37.45	1.00e-42	166.00
IUUC-Afl-008485	Aspergillus flavus	42.46	9.00e-36	144.00
IUUC-Afu-008780	Aspergillus fumigatus	37.31	7.00e-43	167.00
IUUC-Ani-009417	Aspergillus nidulans	35.82	2.00e-41	162.00
IUUC-Ang-009543	Aspergillus niger	36.80	3.00e-41	161.00
IUUC-Aor-010234	Aspergillus oryzae	36.33	5.00e-42	164.00
IUUC-Ate-010386	Aspergillus terreus	36.30	2.00e-41	162.00
IUUC-Ame-010874	Astyanax mexicanus	36.68	1.00e-42	166.00
IUUC-Bgr-012192	Blumeria graminis	33.33	1.00e-37	149.00
IUUC-Bta-012530	Bos taurus	37.12	6.00e-40	157.00
IUUC-Bci-013616	Botrytis cinerea	36.84	1.00e-40	159.00
IUUC-Bdi-014632	Brachypodium distachyon	74.33	1.00e-117	416.00
IUUC-Bol-016274	Brassica oleracea	79.03	2.00e-129	454.00
IUUC-Bra-016790	Brassica rapa	79.03	3.00e-123	434.00
IUUC-Cel-018122	Caenorhabditis elegans	36.60	3.00e-35	141.00
IUUC-Cja-019362	Callithrix jacchus	37.12	5.00e-40	157.00
IUUC-Cfa-020167	Canis familiaris	37.12	5.00e-40	157.00
IUUC-Cpo-021933	Cavia porcellus	37.12	4.00e-40	158.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	55.22	1.00e-20	92.00
IUUC-Csa-023277	Chlorocebus sabaeus	37.12	1.00e-40	160.00
IUUC-Cho-024449	Choloepus hoffmanni	27.63	3.00e-12	65.10
IUUC-Cin-025186	Ciona intestinalis	33.08	2.00e-29	122.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	34.96	1.00e-38	153.00
IUUC-Cne-026926	Cryptococcus neoformans	35.54	2.00e-41	162.00
IUUC-Dre-027781	Danio rerio	37.40	4.00e-44	171.00
IUUC-Dno-029092	Dasypus novemcinctus	36.88	1.00e-39	157.00
IUUC-Dor-030391	Dipodomys ordii	37.55	4.00e-40	158.00
IUUC-Dse-031574	Dothistroma septosporum	35.21	8.00e-41	160.00
IUUC-Dme-031907	Drosophila melanogaster	32.84	1.00e-32	133.00
IUUC-Ete-032299	Echinops telfairi	37.12	1.00e-40	160.00
IUUC-Eca-034074	Equus caballus	37.12	5.00e-40	157.00
IUUC-Eeu-035041	Erinaceus europaeus	30.71	5.00e-17	81.30
IUUC-Fca-036154	Felis catus	37.12	5.00e-40	157.00
IUUC-Fal-037279	Ficedula albicollis	37.50	2.00e-43	169.00
IUUC-Fox-037842	Fusarium oxysporum	38.31	5.00e-43	167.00
IUUC-Fso-038276	Fusarium solani	36.70	1.00e-41	163.00
IUUC-Gmo-039673	Gadus morhua	34.85	2.00e-36	145.00
IUUC-Ggr-039762	Gaeumannomyces graminis	38.06	6.00e-41	160.00
IUUC-Gga-040189	Gallus gallus	37.12	3.00e-43	168.00
IUUC-Gac-042531	Gasterosteus aculeatus	34.08	3.00e-36	145.00
IUUC-Gma-043868	Glycine max	84.09	1.00e-133	469.00
IUUC-Ggo-045355	Gorilla gorilla	34.44	2.00e-28	119.00
IUUC-Hsa-046309	Homo sapiens	37.12	5.00e-40	157.00
IUUC-Hvu-047456	Hordeum vulgare	70.88	2.00e-75	274.00
IUUC-Itr-047864	Ictidomys tridecemlineatus	37.12	5.00e-40	157.00
IUUC-Kpa-049288	Komagataella pastoris	34.70	9.00e-33	133.00
IUUC-Lch-049679	Latimeria chalumnae	35.11	4.00e-41	161.00
IUUC-Lpe-050869	Leersia perrieri	73.96	2.00e-118	418.00
IUUC-Loc-052532	Lepisosteus oculatus	36.74	1.00e-41	162.00
IUUC-Lma-053109	Leptosphaeria maculans	36.19	6.00e-40	157.00
IUUC-Laf-054271	Loxodonta africana	37.12	5.00e-40	157.00
IUUC-Mcc-054857	Macaca mulatta	37.16	1.00e-39	156.00
IUUC-Meu-056302	Macropus eugenii	38.02	3.00e-42	164.00
IUUC-Mor-057167	Magnaporthe oryzae	36.19	2.00e-39	155.00
IUUC-Mtr-057659	Medicago truncatula	81.06	1.00e-128	451.00
IUUC-Mla-058886	Melampsora laricipopulina	33.33	6.00e-40	157.00
IUUC-Mga-059327	Meleagris gallopavo	37.12	3.00e-43	168.00
IUUC-Mvi-060302	Microbotryum violaceum	32.29	7.00e-36	144.00
IUUC-Mmr-060765	Microcebus murinus	37.16	1.00e-39	156.00
IUUC-Mdo-062326	Monodelphis domestica	37.12	2.00e-40	159.00
IUUC-Mmu-063819	Mus musculus	37.50	1.00e-40	159.00
IUUC-Mac-064632	Musa acuminata	77.31	9.00e-122	429.00
IUUC-Mpu-066247	Mustela putorius furo	36.12	8.00e-39	153.00
IUUC-Mlu-067184	Myotis lucifugus	37.12	8.00e-40	157.00
IUUC-Nfi-068383	Neosartorya fischeri	37.69	1.00e-43	169.00
IUUC-Ncr-068777	Neurospora crassa	35.96	2.00e-38	152.00
IUUC-Nle-069900	Nomascus leucogenys	37.12	5.00e-40	157.00
IUUC-Opr-070386	Ochotona princeps	37.12	4.00e-40	157.00
IUUC-Ont-071283	Oreochromis niloticus	35.47	1.00e-35	143.00
IUUC-Oan-073139	Ornithorhynchus anatinus	37.50	9.00e-41	160.00
IUUC-Ocu-074340	Oryctolagus cuniculus	37.12	5.00e-40	157.00
IUUC-Oba-075379	Oryza barthii	74.24	1.00e-118	419.00
IUUC-Obr-076404	Oryza brachyantha	73.48	7.00e-118	416.00
IUUC-Ogl-077409	Oryza glaberrima	73.52	3.00e-113	401.00
IUUC-Ogu-078759	Oryza glumaepatula	74.24	2.00e-118	419.00
IUUC-Oin-079118	Oryza indica	74.24	5.00e-119	420.00
IUUC-Olo-081055	Oryza longistaminata	76.75	1.00e-106	379.00
IUUC-Ome-081281	Oryza meridionalis	74.24	2.00e-118	418.00
IUUC-Oni-083043	Oryza nivara	74.24	1.00e-118	419.00
IUUC-Opu-083392	Oryza punctata	73.86	4.00e-118	417.00
IUUC-Oru-084839	Oryza rufipogon	74.24	1.00e-118	419.00
IUUC-Osa-085377	Oryza sativa	74.24	5.00e-119	420.00
IUUC-Ola-087274	Oryzias latipes	35.63	1.00e-36	146.00
IUUC-Oga-088016	Otolemur garnettii	37.12	1.00e-39	156.00
IUUC-Oar-089613	Ovis aries	37.12	5.00e-40	157.00
IUUC-Ptr-091548	Pan troglodytes	37.12	5.00e-40	157.00
IUUC-Pan-091727	Papio anubis	37.12	9.00e-41	160.00
IUUC-Psi-093767	Pelodiscus sinensis	36.74	5.00e-42	164.00
IUUC-Pma-094124	Petromyzon marinus	36.64	8.00e-45	173.00
IUUC-Pno-095031	Phaeosphaeria nodorum	36.47	1.00e-39	156.00
IUUC-Ppa-095858	Physcomitrella patens	57.58	8.00e-88	317.00
IUUC-Pfo-097107	Poecilia formosa	36.60	2.00e-37	149.00
IUUC-Pab-098238	Pongo abelii	36.74	1.00e-39	156.00
IUUC-Pca-100580	Procavia capensis	36.74	3.00e-39	155.00
IUUC-Ppe-101681	Prunus persica	82.09	3.00e-134	471.00
IUUC-Pva-102928	Pteropus vampyrus	37.12	1.00e-39	156.00
IUUC-Pgr-103309	Puccinia graminis	36.00	7.00e-41	160.00
IUUC-Ptt-103959	Puccinia triticina	37.68	3.00e-41	162.00
IUUC-Pte-104384	Pyrenophora teres	36.57	7.00e-37	147.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	36.57	6.00e-37	147.00
IUUC-Rno-104846	Rattus norvegicus	37.12	5.00e-40	157.00
IUUC-Sce-106411	Saccharomyces cerevisiae	33.33	4.00e-35	141.00
IUUC-Sha-106691	Sarcophilus harrisii	37.12	2.00e-40	159.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	33.21	9.00e-38	150.00
IUUC-Spo-108053	Schizosaccharomyces pombe	32.60	2.00e-34	139.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	36.47	1.00e-40	159.00
IUUC-Smo-108836	Selaginella moellendorffii	61.57	2.00e-102	365.00
IUUC-Sit-110150	Setaria italica	74.71	1.00e-119	422.00
IUUC-Sly-111048	Solanum lycopersicum	76.21	3.00e-120	424.00
IUUC-Sar-113404	Sorex araneus	43.14	3.00e-31	128.00
IUUC-Sbi-114685	Sorghum bicolor	68.58	1.00e-101	362.00
IUUC-Sre-115090	Sporisorium reilianum	40.33	4.00e-34	138.00
IUUC-Ssc-115851	Sus scrofa	37.12	5.00e-40	157.00
IUUC-Tgu-116701	Taeniopygia guttata	37.50	2.00e-43	169.00
IUUC-Tru-117603	Takifugu rubripes	35.96	8.00e-39	154.00
IUUC-Tni-119844	Tetraodon nigroviridis	35.98	3.00e-36	145.00
IUUC-Tca-121645	Theobroma cacao	85.82	4.00e-128	450.00
IUUC-Tre-122045	Trichoderma reesei	37.59	3.00e-42	164.00
IUUC-Tvi-122523	Trichoderma virens	37.83	1.00e-41	163.00
IUUC-Tae-123562	Triticum aestivum	73.21	4.00e-116	410.00
IUUC-Tur-126640	Triticum urartu	69.45	3.00e-112	397.00
IUUC-Tme-127018	Tuber melanosporum	36.53	5.00e-37	147.00
IUUC-Tbe-127321	Tupaia belangeri	38.43	7.00e-35	140.00
IUUC-Ttr-128178	Tursiops truncatus	37.12	1.00e-40	159.00
IUUC-Uma-129423	Ustilago maydis	39.78	6.00e-33	134.00
IUUC-Vda-129706	Verticillium dahliae	35.82	1.00e-38	153.00
IUUC-Vvi-131647	Vitis vinifera	86.94	1.00e-133	468.00
IUUC-Xtr-131770	Xenopus tropicalis	36.33	2.00e-41	162.00
IUUC-Xma-133435	Xiphophorus maculatus	36.60	2.00e-37	149.00
IUUC-Yli-134471	Yarrowia lipolytica	35.77	2.00e-41	162.00
IUUC-Zma-135542	Zea mays	66.20	6.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence