iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118106

Ensembl Protein ID

ENSTRUP00000031570.1

UniProt Accession

H2U3Q9; H2U3Q9_TAKRU

Protein Name

Uncharacterized protein

Gene Name

arpc1b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000012462.1	ENSTRUT00000031693.1	ENSTRUP00000031570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-20	71.3	51	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++ vt++++ +d +++v+++ D + +vW l++
   Q: 51   HNGQVTGVDWaPDsNRIVTCGADRNAYVWTLKE 83
           9**********999***************8866 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MAYHSFLLEP ISCHAWNKDR TQVALCPNNH EVHIYKQEGS KWSKIHELKE HNGQVTGVDW 60
APDSNRIVTC GADRNAYVWT LKEGAWKPTL VILRINRAAR CVKWSPQENK FAVGSGSRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTTTTTC TACCAGGTTC CTCAAGTCAC TTCCTGGTCC GGTTCTCACG TCTGATTGGT 60
CATGGCGTAC CACAGCTTCC TGCTGGAACC CATTAGCTGC CATGCCTGGA ATAAAGATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

tru:101078408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.39	5.00e-63	234.00
IUUC-Aml-001709	Ailuropoda melanoleuca	73.70	2.00e-176	611.00
IUUC-Ame-011512	Astyanax mexicanus	79.68	0.00e+00	645.00
IUUC-Bta-012442	Bos taurus	72.97	1.00e-174	605.00
IUUC-Bol-016274	Brassica oleracea	41.51	4.00e-82	298.00
IUUC-Cja-019899	Callithrix jacchus	74.02	2.00e-176	611.00
IUUC-Cfa-020067	Canis familiaris	73.68	1.00e-175	608.00
IUUC-Cpo-022461	Cavia porcellus	74.21	2.00e-177	614.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	36.22	1.00e-34	139.00
IUUC-Csa-023277	Chlorocebus sabaeus	71.84	2.00e-170	591.00
IUUC-Dre-028141	Danio rerio	80.21	0.00e+00	646.00
IUUC-Dor-030559	Dipodomys ordii	74.21	3.00e-177	613.00
IUUC-Ete-032299	Echinops telfairi	74.21	5.00e-177	613.00
IUUC-Eca-033593	Equus caballus	72.70	1.00e-173	602.00
IUUC-Fca-036254	Felis catus	73.95	2.00e-176	611.00
IUUC-Fal-037453	Ficedula albicollis	76.58	1.00e-180	625.00
IUUC-Gmo-038471	Gadus morhua	81.99	0.00e+00	632.00
IUUC-Gga-040898	Gallus gallus	75.93	6.00e-180	623.00
IUUC-Gac-042236	Gasterosteus aculeatus	87.89	0.00e+00	693.00
IUUC-Ggo-045355	Gorilla gorilla	59.84	5.00e-135	473.00
IUUC-Hsa-046623	Homo sapiens	73.68	3.00e-176	610.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	74.47	3.00e-178	617.00
IUUC-Lch-049679	Latimeria chalumnae	75.20	3.00e-176	610.00
IUUC-Loc-052140	Lepisosteus oculatus	78.63	1.00e-178	619.00
IUUC-Laf-054287	Loxodonta africana	72.14	7.00e-169	586.00
IUUC-Meu-056302	Macropus eugenii	76.72	0.00e+00	628.00
IUUC-Mga-059279	Meleagris gallopavo	75.93	4.00e-180	623.00
IUUC-Mmr-060752	Microcebus murinus	74.80	1.00e-174	605.00
IUUC-Mdo-062836	Monodelphis domestica	74.34	2.00e-171	595.00
IUUC-Mmu-064099	Mus musculus	73.44	9.00e-175	605.00
IUUC-Mpu-066247	Mustela putorius furo	74.21	2.00e-174	604.00
IUUC-Mlu-067571	Myotis lucifugus	75.73	3.00e-180	624.00
IUUC-Ont-071316	Oreochromis niloticus	91.32	0.00e+00	684.00
IUUC-Oan-072692	Ornithorhynchus anatinus	75.66	8.00e-179	619.00
IUUC-Ocu-074187	Oryctolagus cuniculus	71.92	6.00e-169	586.00
IUUC-Ola-087029	Oryzias latipes	87.83	8.00e-171	592.00
IUUC-Oga-088610	Otolemur garnettii	74.47	2.00e-177	614.00
IUUC-Oar-089639	Ovis aries	72.70	2.00e-171	594.00
IUUC-Ptr-091023	Pan troglodytes	73.68	4.00e-176	610.00
IUUC-Pan-091727	Papio anubis	73.95	3.00e-177	614.00
IUUC-Pfo-097058	Poecilia formosa	90.26	0.00e+00	704.00
IUUC-Pab-098238	Pongo abelii	73.95	1.00e-177	615.00
IUUC-Pca-100580	Procavia capensis	73.16	1.00e-172	598.00
IUUC-Ppe-101681	Prunus persica	40.27	2.00e-79	289.00
IUUC-Pva-102928	Pteropus vampyrus	71.05	1.00e-165	575.00
IUUC-Rno-104846	Rattus norvegicus	73.68	3.00e-175	607.00
IUUC-Tni-120079	Tetraodon nigroviridis	96.31	0.00e+00	738.00
IUUC-Tur-126640	Triticum urartu	40.33	7.00e-68	251.00
IUUC-Ttr-128698	Tursiops truncatus	74.47	2.00e-177	614.00
IUUC-Vvi-131647	Vitis vinifera	41.46	3.00e-80	291.00
IUUC-Xtr-131893	Xenopus tropicalis	74.60	4.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence