iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068314

Ensembl Protein ID

CADNFIAP00005178

UniProt Accession

A1DNV8; CMR1_NEOFI

Genbank Protein ID

EAW16479.1

Protein Name

DNA damage-binding protein cmr1

Genbank Nucleotide ID

DS027698

Gene Name

NFIA_058290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00005306	CADNFIAT00005306	CADNFIAP00005178

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-13	49.1	352	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.sd.tllvsGsdDgtikvWDlr 31
           f +  ++++++s D t+++WD+r
   Q: 352  FpTHpHFFATASLDRTMRLWDIR 374
           45335779*************87 PP

Organism

Neosartorya fischeri

Functional Description
(View)

DNA-binding protein that binds to both single- and double-stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.

Protein Sequence
(Fasta)

MGADNELSEF EKQRLANIAE RDALLKKLTL DAQSAGLFPP KSARSSPGGL TKPKKKPAPK 60
KVKKEDEDLV PRRMSSRLRG LAADSEVAKR KADEQYEAAQ QAERAKRVRK SDAFSFSEML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCCG ATAATGAGCT CTCCGAATTC GAAAAGCAGC GTCTCGCGAA CATCGCCGAG 60
CGTGATGCGC TCCTCAAGAA GCTGACCCTG GACGCCCAGT CGGCCGGGCT CTTCCCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000790--C:nuclear chromatin
GO:0034399--C:nuclear periphery
GO:0003677--F:DNA binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:2000001--P:regulation of DNA damage checkpoint

KEGG

nfi:NFIA_058290

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000577	Aegilops tauschii	30.28	3.00e-11	60.80
IUUC-Atr-002605	Amborella trichopoda	22.36	8.00e-16	76.60
IUUC-Apl-003441	Anas platyrhynchos	24.47	7.00e-25	106.00
IUUC-Aca-004241	Anolis carolinensis	27.87	2.00e-30	124.00
IUUC-Aly-005444	Arabidopsis lyrata	26.51	1.00e-29	122.00
IUUC-Ath-007550	Arabidopsis thaliana	26.27	2.00e-28	118.00
IUUC-Ago-007715	Ashbya gossypii	32.81	9.00e-54	202.00
IUUC-Acl-008370	Aspergillus clavatus	87.57	0.00e+00	926.00
IUUC-Afl-008586	Aspergillus flavus	81.71	0.00e+00	824.00
IUUC-Afu-008907	Aspergillus fumigatus	97.34	0.00e+00	956.00
IUUC-Ani-009415	Aspergillus nidulans	80.69	0.00e+00	808.00
IUUC-Ang-009597	Aspergillus niger	68.55	4.00e-146	509.00
IUUC-Aor-010197	Aspergillus oryzae	81.71	0.00e+00	824.00
IUUC-Ate-010280	Aspergillus terreus	79.10	0.00e+00	841.00
IUUC-Bgr-012236	Blumeria graminis	49.52	2.00e-136	477.00
IUUC-Bta-013059	Bos taurus	27.37	5.00e-31	127.00
IUUC-Bci-013796	Botrytis cinerea	51.80	2.00e-143	500.00
IUUC-Bdi-015040	Brachypodium distachyon	30.18	2.00e-26	112.00
IUUC-Bol-015934	Brassica oleracea	25.22	6.00e-23	100.00
IUUC-Bra-018032	Brassica rapa	27.27	8.00e-27	113.00
IUUC-Cja-019043	Callithrix jacchus	26.39	1.00e-32	133.00
IUUC-Cfa-021103	Canis familiaris	26.32	2.00e-28	118.00
IUUC-Cpo-021508	Cavia porcellus	28.21	1.00e-30	126.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	20.82	6.00e-11	60.80
IUUC-Csa-023555	Chlorocebus sabaeus	26.91	5.00e-31	127.00
IUUC-Cin-025651	Ciona intestinalis	24.79	6.00e-22	97.10
IUUC-Cgl-026604	Colletotrichum gloeosporioides	51.77	2.00e-124	437.00
IUUC-Cne-027093	Cryptococcus neoformans	27.85	6.00e-41	160.00
IUUC-Cme-027238	Cyanidioschyzon merolae	25.54	2.00e-21	95.50
IUUC-Dre-027441	Danio rerio	26.69	1.00e-28	119.00
IUUC-Dno-029575	Dasypus novemcinctus	26.25	1.00e-27	116.00
IUUC-Dor-030554	Dipodomys ordii	25.20	2.00e-29	121.00
IUUC-Dse-031299	Dothistroma septosporum	55.26	1.00e-147	514.00
IUUC-Ete-032716	Echinops telfairi	25.64	4.00e-15	74.70
IUUC-Eca-034027	Equus caballus	25.36	4.00e-17	80.90
IUUC-Eeu-035234	Erinaceus europaeus	25.60	5.00e-09	54.70
IUUC-Fca-035892	Felis catus	26.32	3.00e-27	115.00
IUUC-Fal-036986	Ficedula albicollis	24.80	6.00e-24	103.00
IUUC-Fox-037750	Fusarium oxysporum	47.65	2.00e-128	450.00
IUUC-Fso-038198	Fusarium solani	51.75	3.00e-121	426.00
IUUC-Gga-040479	Gallus gallus	26.18	4.00e-16	77.40
IUUC-Gac-042043	Gasterosteus aculeatus	27.52	4.00e-22	97.40
IUUC-Gma-042915	Glycine max	26.36	9.00e-29	119.00
IUUC-Ggo-045290	Gorilla gorilla	26.65	8.00e-34	136.00
IUUC-Hsa-047021	Homo sapiens	26.91	1.00e-33	136.00
IUUC-Hvu-047193	Hordeum vulgare	28.69	4.00e-26	110.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	26.65	3.00e-32	131.00
IUUC-Kpa-049275	Komagataella pastoris	32.91	6.00e-71	259.00
IUUC-Lch-049718	Latimeria chalumnae	26.29	2.00e-28	118.00
IUUC-Lpe-051708	Leersia perrieri	29.62	3.00e-25	108.00
IUUC-Loc-052565	Lepisosteus oculatus	25.42	7.00e-31	126.00
IUUC-Lma-053276	Leptosphaeria maculans	56.06	5.00e-161	559.00
IUUC-Laf-053970	Loxodonta africana	26.74	6.00e-33	134.00
IUUC-Mcc-054740	Macaca mulatta	26.65	7.00e-31	126.00
IUUC-Meu-056546	Macropus eugenii	25.35	4.00e-13	68.20
IUUC-Mtr-058451	Medicago truncatula	23.93	1.00e-27	115.00
IUUC-Mla-058906	Melampsora laricipopulina	33.01	2.00e-51	195.00
IUUC-Mga-059328	Meleagris gallopavo	26.06	5.00e-22	97.10
IUUC-Mvi-060555	Microbotryum violaceum	31.64	3.00e-38	151.00
IUUC-Mmr-061520	Microcebus murinus	25.00	5.00e-32	130.00
IUUC-Mdo-062812	Monodelphis domestica	25.52	3.00e-32	131.00
IUUC-Mmu-064011	Mus musculus	24.53	6.00e-24	103.00
IUUC-Mpu-066486	Mustela putorius furo	26.70	9.00e-29	120.00
IUUC-Mlu-067721	Myotis lucifugus	25.66	1.00e-20	92.80
IUUC-Ncr-068896	Neurospora crassa	51.42	4.00e-130	456.00
IUUC-Nle-069369	Nomascus leucogenys	26.91	3.00e-33	134.00
IUUC-Opr-070975	Ochotona princeps	25.88	5.00e-28	117.00
IUUC-Ont-072528	Oreochromis niloticus	24.44	2.00e-24	105.00
IUUC-Oan-072955	Ornithorhynchus anatinus	25.29	1.00e-23	102.00
IUUC-Ocu-074561	Oryctolagus cuniculus	26.29	2.00e-29	122.00
IUUC-Oba-074982	Oryza barthii	26.99	1.00e-28	119.00
IUUC-Obr-076551	Oryza brachyantha	28.83	3.00e-21	93.60
IUUC-Ogl-077685	Oryza glaberrima	27.73	2.00e-29	121.00
IUUC-Ogu-078331	Oryza glumaepatula	27.73	3.00e-29	121.00
IUUC-Oin-079507	Oryza indica	27.53	1.00e-27	116.00
IUUC-Olo-080604	Oryza longistaminata	29.11	4.00e-26	110.00
IUUC-Ome-081816	Oryza meridionalis	26.48	5.00e-26	110.00
IUUC-Oni-082051	Oryza nivara	27.73	4.00e-29	120.00
IUUC-Opu-083372	Oryza punctata	27.73	9.00e-29	119.00
IUUC-Oru-084578	Oryza rufipogon	27.73	3.00e-29	121.00
IUUC-Osa-086177	Oryza sativa	27.73	3.00e-29	121.00
IUUC-Ola-087208	Oryzias latipes	27.25	3.00e-22	97.80
IUUC-Olu-087680	Ostreococcus lucimarinus	26.21	2.00e-22	98.60
IUUC-Oga-088104	Otolemur garnettii	27.63	8.00e-34	136.00
IUUC-Oar-090157	Ovis aries	26.84	9.00e-31	126.00
IUUC-Ptr-091615	Pan troglodytes	26.65	2.00e-33	135.00
IUUC-Pan-092212	Papio anubis	26.12	1.00e-30	126.00
IUUC-Psi-092950	Pelodiscus sinensis	24.47	3.00e-27	114.00
IUUC-Pma-094625	Petromyzon marinus	30.52	3.00e-13	67.40
IUUC-Pno-094824	Phaeosphaeria nodorum	57.36	5.00e-168	582.00
IUUC-Ppa-095414	Physcomitrella patens	23.76	7.00e-14	70.90
IUUC-Pfo-096922	Poecilia formosa	26.30	3.00e-27	115.00
IUUC-Pab-097591	Pongo abelii	26.91	5.00e-34	137.00
IUUC-Pop-099337	Populus trichocarpa	25.66	2.00e-29	122.00
IUUC-Pca-101025	Procavia capensis	25.80	6.00e-29	120.00
IUUC-Ppe-101256	Prunus persica	25.89	7.00e-17	80.10
IUUC-Pva-102453	Pteropus vampyrus	27.11	8.00e-32	130.00
IUUC-Pgr-103436	Puccinia graminis	30.99	2.00e-52	198.00
IUUC-Ptt-103899	Puccinia triticina	36.36	7.00e-42	163.00
IUUC-Pte-104258	Pyrenophora teres	55.47	6.00e-164	568.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	54.92	5.00e-163	565.00
IUUC-Rno-104843	Rattus norvegicus	23.86	1.00e-23	103.00
IUUC-Sce-106189	Saccharomyces cerevisiae	34.90	3.00e-50	191.00
IUUC-Sha-106672	Sarcophilus harrisii	25.14	8.00e-34	136.00
IUUC-Smo-109176	Selaginella moellendorffii	25.07	6.00e-23	99.80
IUUC-Sit-109704	Setaria italica	26.76	8.00e-31	126.00
IUUC-Sly-111853	Solanum lycopersicum	25.77	5.00e-29	120.00
IUUC-Stu-112482	Solanum tuberosum	26.58	2.00e-29	121.00
IUUC-Sar-113537	Sorex araneus	28.71	3.00e-08	51.60
IUUC-Sbi-114517	Sorghum bicolor	27.37	4.00e-25	107.00
IUUC-Sre-114960	Sporisorium reilianum	30.88	7.00e-28	117.00
IUUC-Ssc-115568	Sus scrofa	26.91	2.00e-32	132.00
IUUC-Tgu-117276	Taeniopygia guttata	23.87	9.00e-17	79.70
IUUC-Tru-117559	Takifugu rubripes	35.23	5.00e-07	44.70
IUUC-Tsy-119234	Tarsius syrichta	23.24	2.00e-15	75.90
IUUC-Tni-120358	Tetraodon nigroviridis	25.14	8.00e-26	109.00
IUUC-Tca-121273	Theobroma cacao	25.64	2.00e-24	105.00
IUUC-Tre-121932	Trichoderma reesei	48.41	3.00e-133	466.00
IUUC-Tvi-122567	Trichoderma virens	50.09	3.00e-139	486.00
IUUC-Tae-123506	Triticum aestivum	27.04	4.00e-25	107.00
IUUC-Tur-125970	Triticum urartu	26.55	5.00e-17	80.10
IUUC-Tme-126958	Tuber melanosporum	41.16	2.00e-83	300.00
IUUC-Tbe-127425	Tupaia belangeri	27.63	1.00e-31	129.00
IUUC-Ttr-129123	Tursiops truncatus	27.56	1.00e-27	116.00
IUUC-Uma-129495	Ustilago maydis	29.76	5.00e-26	110.00
IUUC-Vda-129981	Verticillium dahliae	49.34	2.00e-122	431.00
IUUC-Vpa-130437	Vicugna pacos	25.20	2.00e-29	122.00
IUUC-Vvi-131430	Vitis vinifera	24.57	1.00e-25	108.00
IUUC-Xtr-132670	Xenopus tropicalis	24.25	2.00e-26	112.00
IUUC-Xma-133375	Xiphophorus maculatus	26.70	6.00e-24	103.00
IUUC-Yli-134341	Yarrowia lipolytica	33.57	2.00e-71	261.00
IUUC-Zma-135413	Zea mays	26.27	3.00e-28	117.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence