iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-116613

Ensembl Protein ID

ENSTGUP00000013014.1

UniProt Accession

H0ZQX3; H0ZQX3_TAEGU

Genbank Protein ID

ENSTGUP00000013014

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01033651

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000012633.1	ENSTGUT00000013162.1	ENSTGUP00000013014.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.20e-19	68.7	300	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vCl+Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 300  VCLFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 347
           8*********88.6*******************.*******7.******75 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

PPPPAAMAGG GGSRYAAEFV PPPECPVFEP SWEEFSDPLG FIGRIRGLAE KTGICKIRPP 60
KDWQPPFACE VQSFRFTPRI QRLNELEAMT RVKLDFLDQL AKFWELQGSN LKIPVVERKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCTCCCC CTGCGGCCAT GGCGGGGGGC GGCGGGTCGC GCTATGCGGC CGAGTTCGTG 60
CCGCCGCCCG AGTGCCCCGT ATTCGAGCCC AGCTGGGAGG AGTTCAGCGA CCCGCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	91.85	0.00e+00	2624.00
IUUC-Atr-002595	Amborella trichopoda	31.00	1.00e-123	437.00
IUUC-Apl-004141	Anas platyrhynchos	96.21	0.00e+00	2984.00
IUUC-Aca-004952	Anolis carolinensis	91.78	0.00e+00	2894.00
IUUC-Ate-010453	Aspergillus terreus	30.15	7.00e-112	399.00
IUUC-Ame-011323	Astyanax mexicanus	78.78	0.00e+00	1943.00
IUUC-Bta-012902	Bos taurus	89.09	0.00e+00	2819.00
IUUC-Bdi-014050	Brachypodium distachyon	29.89	2.00e-118	421.00
IUUC-Cja-018988	Callithrix jacchus	87.90	0.00e+00	2641.00
IUUC-Cfa-020212	Canis familiaris	90.80	0.00e+00	2585.00
IUUC-Cpo-022221	Cavia porcellus	91.70	0.00e+00	2006.00
IUUC-Csa-023575	Chlorocebus sabaeus	90.20	0.00e+00	2730.00
IUUC-Cho-024280	Choloepus hoffmanni	86.26	0.00e+00	2584.00
IUUC-Cin-025321	Ciona intestinalis	49.53	0.00e+00	1090.00
IUUC-Csv-026185	Ciona savignyi	47.44	0.00e+00	1166.00
IUUC-Dre-027909	Danio rerio	75.63	0.00e+00	1656.00
IUUC-Dno-029473	Dasypus novemcinctus	90.85	0.00e+00	2575.00
IUUC-Dor-030281	Dipodomys ordii	86.82	0.00e+00	1175.00
IUUC-Dse-031479	Dothistroma septosporum	30.71	1.00e-104	375.00
IUUC-Dme-032021	Drosophila melanogaster	45.98	0.00e+00	1112.00
IUUC-Eca-034265	Equus caballus	88.44	0.00e+00	2824.00
IUUC-Eeu-034692	Erinaceus europaeus	58.36	0.00e+00	1114.00
IUUC-Fca-035476	Felis catus	90.60	0.00e+00	2615.00
IUUC-Fal-037078	Ficedula albicollis	98.37	0.00e+00	2672.00
IUUC-Gmo-039140	Gadus morhua	54.19	0.00e+00	1352.00
IUUC-Gga-040466	Gallus gallus	96.48	0.00e+00	3068.00
IUUC-Gac-042566	Gasterosteus aculeatus	73.57	0.00e+00	2187.00
IUUC-Ggo-044524	Gorilla gorilla	83.52	0.00e+00	2378.00
IUUC-Hsa-045821	Homo sapiens	90.19	0.00e+00	2819.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	57.05	0.00e+00	1437.00
IUUC-Kpa-049245	Komagataella pastoris	21.13	3.00e-37	150.00
IUUC-Lch-050630	Latimeria chalumnae	75.48	0.00e+00	2151.00
IUUC-Lpe-051537	Leersia perrieri	31.38	9.00e-90	325.00
IUUC-Loc-051963	Lepisosteus oculatus	76.21	0.00e+00	2092.00
IUUC-Laf-053918	Loxodonta africana	82.86	0.00e+00	2422.00
IUUC-Mcc-055672	Macaca mulatta	88.63	0.00e+00	2817.00
IUUC-Meu-056643	Macropus eugenii	55.77	0.00e+00	1344.00
IUUC-Mor-057198	Magnaporthe oryzae	29.89	6.00e-116	412.00
IUUC-Mtr-058113	Medicago truncatula	31.84	1.00e-92	335.00
IUUC-Mga-059192	Meleagris gallopavo	88.49	0.00e+00	2594.00
IUUC-Mmr-060968	Microcebus murinus	88.10	0.00e+00	2818.00
IUUC-Mdo-062945	Monodelphis domestica	90.63	0.00e+00	2729.00
IUUC-Mmu-063614	Mus musculus	88.48	0.00e+00	2794.00
IUUC-Mpu-066349	Mustela putorius furo	91.92	0.00e+00	2625.00
IUUC-Mlu-067363	Myotis lucifugus	89.13	0.00e+00	2865.00
IUUC-Nle-070142	Nomascus leucogenys	90.01	0.00e+00	2831.00
IUUC-Opr-071002	Ochotona princeps	85.33	0.00e+00	1337.00
IUUC-Ont-072471	Oreochromis niloticus	78.68	0.00e+00	1908.00
IUUC-Oan-072797	Ornithorhynchus anatinus	78.19	0.00e+00	2010.00
IUUC-Ocu-074164	Oryctolagus cuniculus	90.28	0.00e+00	2885.00
IUUC-Oba-075388	Oryza barthii	27.66	1.00e-80	295.00
IUUC-Obr-076296	Oryza brachyantha	31.35	3.00e-95	344.00
IUUC-Ogu-079040	Oryza glumaepatula	27.66	6.00e-81	296.00
IUUC-Ome-081764	Oryza meridionalis	29.74	3.00e-99	357.00
IUUC-Oni-083012	Oryza nivara	27.57	2.00e-80	294.00
IUUC-Oru-084630	Oryza rufipogon	27.77	5.00e-80	293.00
IUUC-Ola-087076	Oryzias latipes	74.73	0.00e+00	2108.00
IUUC-Oga-088350	Otolemur garnettii	87.77	0.00e+00	2751.00
IUUC-Oar-090045	Ovis aries	89.17	0.00e+00	2821.00
IUUC-Ptr-091199	Pan troglodytes	89.54	0.00e+00	2811.00
IUUC-Pan-092094	Papio anubis	87.19	0.00e+00	2768.00
IUUC-Psi-093550	Pelodiscus sinensis	93.80	0.00e+00	2666.00
IUUC-Pma-094137	Petromyzon marinus	56.66	0.00e+00	1234.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.25	3.00e-118	420.00
IUUC-Pfo-097266	Poecilia formosa	75.37	0.00e+00	2136.00
IUUC-Pab-098576	Pongo abelii	90.04	0.00e+00	2823.00
IUUC-Pca-100123	Procavia capensis	89.08	0.00e+00	1578.00
IUUC-Pva-103109	Pteropus vampyrus	84.29	0.00e+00	2651.00
IUUC-Pgr-103434	Puccinia graminis	35.15	1.00e-27	116.00
IUUC-Pte-104195	Pyrenophora teres	29.61	3.00e-122	433.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	29.80	9.00e-124	438.00
IUUC-Rno-105664	Rattus norvegicus	89.30	0.00e+00	2801.00
IUUC-Sha-107506	Sarcophilus harrisii	90.73	0.00e+00	2490.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	21.37	5.00e-41	163.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.33	1.00e-43	172.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	9.00e-11	62.00
IUUC-Sit-110534	Setaria italica	29.59	9.00e-116	412.00
IUUC-Sar-113052	Sorex araneus	88.52	0.00e+00	2808.00
IUUC-Sre-115161	Sporisorium reilianum	29.47	3.00e-130	460.00
IUUC-Ssc-116354	Sus scrofa	57.05	0.00e+00	1424.00
IUUC-Tru-118604	Takifugu rubripes	75.27	0.00e+00	2165.00
IUUC-Tni-120779	Tetraodon nigroviridis	74.92	0.00e+00	2148.00
IUUC-Tre-122213	Trichoderma reesei	29.59	2.00e-114	407.00
IUUC-Tvi-122263	Trichoderma virens	29.41	2.00e-110	394.00
IUUC-Tae-125894	Triticum aestivum	29.13	2.00e-108	387.00
IUUC-Tme-127087	Tuber melanosporum	34.11	5.00e-120	426.00
IUUC-Tbe-128040	Tupaia belangeri	67.80	0.00e+00	772.00
IUUC-Ttr-129242	Tursiops truncatus	89.46	0.00e+00	2565.00
IUUC-Uma-129590	Ustilago maydis	29.63	4.00e-132	466.00
IUUC-Vpa-130429	Vicugna pacos	85.30	0.00e+00	1395.00
IUUC-Xtr-131762	Xenopus tropicalis	76.19	0.00e+00	2137.00
IUUC-Xma-133693	Xiphophorus maculatus	75.54	0.00e+00	2157.00
IUUC-Zma-135829	Zea mays	29.05	1.00e-114	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence