iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012137

Ensembl Protein ID

CCU76722

UniProt Accession

N1JFS6; N1JFS6_BLUG1

Genbank Protein ID

CCU76722.1

Protein Name

RNA polymerase II Elongator subunit

Genbank Nucleotide ID

CAUH01002929

Gene Name

BGHDH14_bgh00935

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh00935	CCU76722	CCU76722

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-42	140.2	103	133
UBD/Beta-Prp	4.70e-52	175.4	166	473

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           Ht+s++cla   ++ ++++sG+ D t+++W+
   Q: 103  HTGSIHCLAVskNGaPIFASGAADSTVRIWS 133
           ***********9889***************8 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdls........................... 82
           s ++ lla++++++ti ++  ++++        +lsghe+ +++++f++d+      +l+++s+D+ i++w +s                           
   Q: 166  SANSYLLAVAGTRETILLYVRDSKQDsnfqlQVTLSGHEGWIRSLDFIQDSTsqgdiLLASASQDKYIRLWRISqgyqapslaadsssshsssllpgktla 266
           55677888888888888886555444677878899999999999999999888899999999999999999999555555555555555555555555555 PP
   S: 83   .............tgkcvhtlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqclee...............tlsghdgvvncvvvhpdgnllv 153
                        + +    l ghed ++s+++ p  s+  l+s+s+d+ + +w+ ++ + +++               t +g +g  ++  +  +gn +v
   Q: 267  nksqhfqaesldySASFEALLFGHEDWIYSCKWKPagSRLQLLSASADNSLAIWEPDESTGVYTiiarmgeissekgstTATGSTGGFWMGLWAASGNAVV 367
           55555555544322222222225555555555555333344555555555555555555555555555555555555555555555555555555555555 PP
   S: 154  sGslDrtvrlWdlktgkllrtl......tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
             +  +  +lW    +   +++      +g htd+v+s+++++ g++l+s s d+t +                                          +
   Q: 368  CLGRTGSWKLWTW--NVARERWiqgtgvSG-HTDAVNSIAWSKGGEYLLSTSADQTTR------------------------------------------L 423
           5555555555533..222233333335343.555555555555555555555555555..........................................4 PP
   S: 249  ...Wdlrsgdllktlqlhn...ssvisvavlsfgdnvlvlgsedskvniwkl 294
              W  + +++++ +++++    ++++v++  +g   +v+g+e++ ++++k 
   Q: 424  haeWKRDGRKTWHEMARPQihgYNLSCVDT--LGSTQFVSGAEEKLLRVFKI 473
           444444444444444444444444444444..44444555555444444443 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MLQVSADYLS AGANRHSSAA DWDASGLLAF GADRNIALWE PLDKESRGIS ALLTGHTDKV 60
NALKFLPASS STLLSGSVDQ TLKVWKKCEG SDKYKCIHSL SDHTGSIHCL AVSKNGAPIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTCAGG TCTCGGCCGA TTACCTGAGT GCCGGTGCCA ATCGTCACTC TTCCGCCGCC 60
GATTGGGATG CATCGGGATT GCTGGCCTTC GGTGCCGACC GAAATATCGC ATTATGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	31.15	9.00e-91	326.00
IUUC-Aml-002049	Ailuropoda melanoleuca	32.47	5.00e-91	327.00
IUUC-Atr-002456	Amborella trichopoda	32.28	2.00e-100	358.00
IUUC-Apl-004053	Anas platyrhynchos	32.88	2.00e-104	371.00
IUUC-Aca-004535	Anolis carolinensis	28.28	1.00e-92	332.00
IUUC-Aly-005746	Arabidopsis lyrata	32.48	4.00e-104	370.00
IUUC-Ath-006664	Arabidopsis thaliana	32.56	2.00e-101	362.00
IUUC-Ago-007971	Ashbya gossypii	38.54	5.00e-140	489.00
IUUC-Acl-008173	Aspergillus clavatus	49.82	0.00e+00	735.00
IUUC-Afl-008665	Aspergillus flavus	48.26	2.00e-106	378.00
IUUC-Afu-008976	Aspergillus fumigatus	50.79	0.00e+00	747.00
IUUC-Ani-009284	Aspergillus nidulans	49.58	0.00e+00	701.00
IUUC-Ang-009809	Aspergillus niger	50.36	0.00e+00	739.00
IUUC-Aor-009959	Aspergillus oryzae	51.04	0.00e+00	741.00
IUUC-Ate-010442	Aspergillus terreus	49.88	0.00e+00	748.00
IUUC-Ame-011409	Astyanax mexicanus	31.92	3.00e-103	367.00
IUUC-Bta-012892	Bos taurus	34.09	4.00e-110	390.00
IUUC-Bci-013944	Botrytis cinerea	54.71	0.00e+00	813.00
IUUC-Bdi-014512	Brachypodium distachyon	32.30	6.00e-99	353.00
IUUC-Bol-015741	Brassica oleracea	33.45	5.00e-107	380.00
IUUC-Bra-017367	Brassica rapa	33.14	2.00e-107	381.00
IUUC-Cel-018712	Caenorhabditis elegans	30.27	2.00e-71	261.00
IUUC-Cja-018865	Callithrix jacchus	29.89	4.00e-93	333.00
IUUC-Cfa-021006	Canis familiaris	32.98	2.00e-107	382.00
IUUC-Cpo-021370	Cavia porcellus	31.55	6.00e-102	363.00
IUUC-Csa-023845	Chlorocebus sabaeus	32.69	4.00e-105	374.00
IUUC-Cho-024640	Choloepus hoffmanni	32.26	2.00e-61	229.00
IUUC-Cin-025772	Ciona intestinalis	31.30	5.00e-97	347.00
IUUC-Csv-025891	Ciona savignyi	30.02	7.00e-92	329.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	49.16	0.00e+00	722.00
IUUC-Cne-027081	Cryptococcus neoformans	34.84	6.00e-111	393.00
IUUC-Cme-027225	Cyanidioschyzon merolae	26.12	2.00e-44	172.00
IUUC-Dre-028250	Danio rerio	31.82	8.00e-104	369.00
IUUC-Dno-028847	Dasypus novemcinctus	32.15	2.00e-105	374.00
IUUC-Dor-030351	Dipodomys ordii	31.57	3.00e-102	364.00
IUUC-Dse-031317	Dothistroma septosporum	48.35	0.00e+00	663.00
IUUC-Dme-032019	Drosophila melanogaster	34.61	1.00e-113	402.00
IUUC-Ete-033194	Echinops telfairi	30.52	3.00e-55	207.00
IUUC-Eca-033779	Equus caballus	32.48	9.00e-107	379.00
IUUC-Eeu-034790	Erinaceus europaeus	32.74	2.00e-59	222.00
IUUC-Fca-036090	Felis catus	33.81	1.00e-106	379.00
IUUC-Fal-037663	Ficedula albicollis	32.05	9.00e-101	359.00
IUUC-Fox-037828	Fusarium oxysporum	50.18	0.00e+00	753.00
IUUC-Fso-038462	Fusarium solani	50.85	0.00e+00	721.00
IUUC-Gmo-039450	Gadus morhua	31.24	6.00e-106	376.00
IUUC-Ggr-040023	Gaeumannomyces graminis	45.64	0.00e+00	669.00
IUUC-Gga-040480	Gallus gallus	32.95	5.00e-111	393.00
IUUC-Gac-041544	Gasterosteus aculeatus	33.67	5.00e-108	383.00
IUUC-Gma-044048	Glycine max	31.29	6.00e-99	353.00
IUUC-Ggo-045381	Gorilla gorilla	31.92	5.00e-97	347.00
IUUC-Hsa-046096	Homo sapiens	29.99	5.00e-91	327.00
IUUC-Hvu-047494	Hordeum vulgare	32.40	7.00e-100	356.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	28.70	9.00e-79	286.00
IUUC-Kpa-049241	Komagataella pastoris	34.19	5.00e-116	410.00
IUUC-Lch-050512	Latimeria chalumnae	32.68	2.00e-96	345.00
IUUC-Lpe-051448	Leersia perrieri	32.20	2.00e-97	348.00
IUUC-Loc-051882	Lepisosteus oculatus	33.57	2.00e-113	401.00
IUUC-Lma-053023	Leptosphaeria maculans	48.16	0.00e+00	697.00
IUUC-Laf-054519	Loxodonta africana	31.53	3.00e-105	374.00
IUUC-Mcc-055580	Macaca mulatta	30.56	2.00e-97	348.00
IUUC-Meu-056606	Macropus eugenii	31.03	2.00e-29	122.00
IUUC-Mor-057109	Magnaporthe oryzae	50.41	0.00e+00	752.00
IUUC-Mpo-057297	Magnaporthe poae	45.29	0.00e+00	674.00
IUUC-Mtr-058348	Medicago truncatula	31.64	7.00e-99	353.00
IUUC-Mla-059159	Melampsora laricipopulina	30.19	2.00e-82	298.00
IUUC-Mga-059778	Meleagris gallopavo	29.22	2.00e-65	241.00
IUUC-Mvi-060447	Microbotryum violaceum	32.58	3.00e-105	374.00
IUUC-Mmr-061139	Microcebus murinus	29.94	2.00e-99	355.00
IUUC-Mdo-061866	Monodelphis domestica	32.82	2.00e-108	385.00
IUUC-Mmu-063390	Mus musculus	32.93	6.00e-109	386.00
IUUC-Mac-064693	Musa acuminata	33.02	1.00e-106	379.00
IUUC-Mpu-066547	Mustela putorius furo	33.01	8.00e-104	369.00
IUUC-Mlu-067156	Myotis lucifugus	32.03	4.00e-106	377.00
IUUC-Nfi-068616	Neosartorya fischeri	50.85	0.00e+00	757.00
IUUC-Ncr-068915	Neurospora crassa	44.19	0.00e+00	679.00
IUUC-Nle-069958	Nomascus leucogenys	32.24	5.00e-100	357.00
IUUC-Opr-071093	Ochotona princeps	30.52	1.00e-41	162.00
IUUC-Ont-072178	Oreochromis niloticus	32.83	1.00e-113	402.00
IUUC-Oan-073667	Ornithorhynchus anatinus	32.15	7.00e-106	376.00
IUUC-Ocu-074662	Oryctolagus cuniculus	33.16	3.00e-107	380.00
IUUC-Oba-075577	Oryza barthii	33.41	1.00e-103	369.00
IUUC-Obr-076566	Oryza brachyantha	33.45	2.00e-106	378.00
IUUC-Ogl-077054	Oryza glaberrima	33.29	2.00e-103	368.00
IUUC-Ogu-078846	Oryza glumaepatula	33.53	3.00e-103	367.00
IUUC-Oin-079084	Oryza indica	33.25	9.00e-104	369.00
IUUC-Olo-080933	Oryza longistaminata	30.93	4.00e-83	300.00
IUUC-Ome-081500	Oryza meridionalis	32.08	2.00e-91	328.00
IUUC-Oni-082352	Oryza nivara	33.29	1.00e-102	365.00
IUUC-Opu-084116	Oryza punctata	32.98	6.00e-104	370.00
IUUC-Oru-085249	Oryza rufipogon	33.25	9.00e-104	369.00
IUUC-Osa-086270	Oryza sativa	33.25	9.00e-104	369.00
IUUC-Ola-086625	Oryzias latipes	29.58	5.00e-89	320.00
IUUC-Olu-087638	Ostreococcus lucimarinus	30.96	3.00e-68	251.00
IUUC-Oga-088634	Otolemur garnettii	29.68	1.00e-92	332.00
IUUC-Oar-089475	Ovis aries	33.98	8.00e-108	383.00
IUUC-Ptr-091131	Pan troglodytes	32.43	9.00e-104	369.00
IUUC-Pan-092869	Papio anubis	32.52	2.00e-103	368.00
IUUC-Psi-093146	Pelodiscus sinensis	34.38	1.00e-93	335.00
IUUC-Pma-094479	Petromyzon marinus	36.09	2.00e-94	338.00
IUUC-Pno-095061	Phaeosphaeria nodorum	40.62	7.00e-141	492.00
IUUC-Ppa-095618	Physcomitrella patens	33.16	8.00e-99	353.00
IUUC-Pfo-096816	Poecilia formosa	31.42	3.00e-105	374.00
IUUC-Pab-097548	Pongo abelii	32.47	3.00e-104	370.00
IUUC-Pop-099643	Populus trichocarpa	32.71	1.00e-101	362.00
IUUC-Pca-100983	Procavia capensis	30.16	1.00e-44	172.00
IUUC-Ppe-101301	Prunus persica	31.40	7.00e-100	356.00
IUUC-Pva-102460	Pteropus vampyrus	32.87	1.00e-102	365.00
IUUC-Pgr-103507	Puccinia graminis	32.12	3.00e-87	314.00
IUUC-Ptt-103892	Puccinia triticina	32.35	2.00e-82	298.00
IUUC-Pte-104283	Pyrenophora teres	46.47	0.00e+00	676.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	44.48	0.00e+00	648.00
IUUC-Rno-105842	Rattus norvegicus	32.08	7.00e-106	376.00
IUUC-Sce-106459	Saccharomyces cerevisiae	37.68	2.00e-137	481.00
IUUC-Sha-106586	Sarcophilus harrisii	27.00	5.00e-65	240.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	38.46	1.00e-128	451.00
IUUC-Spo-108302	Schizosaccharomyces pombe	38.27	4.00e-131	460.00
IUUC-Smo-108919	Selaginella moellendorffii	30.23	1.00e-91	329.00
IUUC-Sit-109915	Setaria italica	32.13	4.00e-101	360.00
IUUC-Sly-111714	Solanum lycopersicum	32.41	3.00e-100	357.00
IUUC-Stu-112631	Solanum tuberosum	32.21	3.00e-101	360.00
IUUC-Sar-113200	Sorex araneus	31.82	2.00e-61	229.00
IUUC-Sbi-114582	Sorghum bicolor	31.37	7.00e-100	356.00
IUUC-Sre-115001	Sporisorium reilianum	30.35	4.00e-48	185.00
IUUC-Ssc-115519	Sus scrofa	32.78	5.00e-107	380.00
IUUC-Tgu-116987	Taeniopygia guttata	31.45	3.00e-101	360.00
IUUC-Tru-118476	Takifugu rubripes	32.96	8.00e-106	376.00
IUUC-Tsy-119230	Tarsius syrichta	38.51	1.00e-26	113.00
IUUC-Tni-120448	Tetraodon nigroviridis	24.35	2.00e-41	162.00
IUUC-Tca-121650	Theobroma cacao	32.41	2.00e-100	358.00
IUUC-Tre-122086	Trichoderma reesei	50.78	0.00e+00	707.00
IUUC-Tvi-122397	Trichoderma virens	51.10	0.00e+00	684.00
IUUC-Tae-123972	Triticum aestivum	31.64	1.00e-99	355.00
IUUC-Tur-126578	Triticum urartu	31.76	3.00e-99	354.00
IUUC-Tme-126927	Tuber melanosporum	45.29	7.00e-177	612.00
IUUC-Tbe-127922	Tupaia belangeri	38.39	1.00e-39	155.00
IUUC-Ttr-128918	Tursiops truncatus	33.38	2.00e-105	375.00
IUUC-Uma-129474	Ustilago maydis	30.99	3.00e-47	182.00
IUUC-Vda-129944	Verticillium dahliae	49.76	0.00e+00	713.00
IUUC-Vpa-130693	Vicugna pacos	33.64	2.00e-104	371.00
IUUC-Vvi-130949	Vitis vinifera	32.68	2.00e-103	368.00
IUUC-Xtr-132639	Xenopus tropicalis	29.37	1.00e-97	348.00
IUUC-Xma-134223	Xiphophorus maculatus	33.84	3.00e-72	263.00
IUUC-Yli-134601	Yarrowia lipolytica	39.27	2.00e-141	494.00
IUUC-Zma-135952	Zea mays	32.67	2.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence