iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017871

Ensembl Protein ID

Bra023473.1-P

UniProt Accession

M4E3X0; M4E3X0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra023473	Bra023473.1	Bra023473.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-17	63.0	112	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH+d+v +l+    + + + sGs D ++++WDlr 
   Q: 112  GHKDRVVSLCMspiN-DSFMSGSLDRSVRLWDLRV 145
           8*********98765.789*************985 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSLTELDDGL VRSMAIGAVF SDFGGKIRSV GFHRTDDLLV TSSEDDSLRL FDIANAKQVK 60
VTYHKKHGTD RVCFTHHPSS LICSSLYNLE STGESLRYLS MYDNRILRYF KGHKDRVVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTTGA CGGAGCTAGA CGACGGACTT GTACGCAGCA TGGCCATCGG AGCAGTCTTC 60
TCCGACTTCG TACGCAATTA CTTTTCTCTT CTCCTATGAT CTCCGATTAA CTTTTGCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016571--P:histone methylation
GO:0048586--P:regulation of long-day photoperiodism, flowering
GO:0048510--P:regulation of timing of transition from vegetative to reproductive phase

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001012	Aegilops tauschii	76.95	3.00e-117	414.00
IUUC-Aml-001221	Ailuropoda melanoleuca	40.06	1.00e-65	242.00
IUUC-Atr-002592	Amborella trichopoda	79.35	3.00e-129	453.00
IUUC-Apl-003817	Anas platyrhynchos	40.00	2.00e-62	233.00
IUUC-Aca-005383	Anolis carolinensis	40.06	1.00e-64	239.00
IUUC-Aly-005437	Arabidopsis lyrata	96.53	0.00e+00	641.00
IUUC-Ath-006793	Arabidopsis thaliana	96.54	0.00e+00	642.00
IUUC-Acl-008217	Aspergillus clavatus	32.52	8.00e-41	160.00
IUUC-Afl-008539	Aspergillus flavus	32.62	3.00e-40	158.00
IUUC-Afu-009105	Aspergillus fumigatus	32.82	1.00e-40	160.00
IUUC-Ani-009474	Aspergillus nidulans	31.79	3.00e-38	152.00
IUUC-Aor-009955	Aspergillus oryzae	32.62	3.00e-40	158.00
IUUC-Ame-010661	Astyanax mexicanus	40.00	5.00e-63	235.00
IUUC-Bgr-012008	Blumeria graminis	31.72	7.00e-41	160.00
IUUC-Bta-013022	Bos taurus	40.00	2.00e-62	233.00
IUUC-Bci-013966	Botrytis cinerea	31.72	6.00e-40	157.00
IUUC-Bdi-015066	Brachypodium distachyon	77.29	6.00e-151	526.00
IUUC-Bol-016019	Brassica oleracea	98.80	0.00e+00	682.00
IUUC-Cel-018276	Caenorhabditis elegans	31.73	2.00e-44	172.00
IUUC-Cja-019309	Callithrix jacchus	40.06	1.00e-65	242.00
IUUC-Cfa-020345	Canis familiaris	40.06	1.00e-65	242.00
IUUC-Cpo-022227	Cavia porcellus	36.42	4.00e-52	197.00
IUUC-Csa-023267	Chlorocebus sabaeus	39.42	7.00e-68	250.00
IUUC-Cho-024409	Choloepus hoffmanni	37.36	2.00e-47	181.00
IUUC-Cin-025628	Ciona intestinalis	41.51	2.00e-69	255.00
IUUC-Csv-026164	Ciona savignyi	41.64	5.00e-72	263.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	30.30	4.00e-36	144.00
IUUC-Cne-026890	Cryptococcus neoformans	33.09	2.00e-28	119.00
IUUC-Dre-028001	Danio rerio	40.38	9.00e-67	246.00
IUUC-Dno-029704	Dasypus novemcinctus	40.51	3.00e-66	244.00
IUUC-Dor-031078	Dipodomys ordii	43.28	8.00e-47	179.00
IUUC-Dse-031152	Dothistroma septosporum	32.32	4.00e-40	158.00
IUUC-Dme-032085	Drosophila melanogaster	38.80	7.00e-70	256.00
IUUC-Ete-033158	Echinops telfairi	39.81	7.00e-66	243.00
IUUC-Eca-033879	Equus caballus	42.00	4.00e-57	215.00
IUUC-Fca-035896	Felis catus	40.06	1.00e-65	242.00
IUUC-Fal-036843	Ficedula albicollis	40.00	2.00e-62	233.00
IUUC-Fox-037858	Fusarium oxysporum	33.13	1.00e-42	166.00
IUUC-Fso-038386	Fusarium solani	32.21	2.00e-36	145.00
IUUC-Gmo-038506	Gadus morhua	41.18	2.00e-63	236.00
IUUC-Ggr-040090	Gaeumannomyces graminis	31.37	8.00e-41	160.00
IUUC-Gga-040192	Gallus gallus	40.06	1.00e-65	242.00
IUUC-Gac-041551	Gasterosteus aculeatus	37.82	6.00e-62	230.00
IUUC-Gma-044074	Glycine max	84.71	8.00e-162	562.00
IUUC-Ggo-044584	Gorilla gorilla	38.78	7.00e-67	246.00
IUUC-Hsa-045866	Homo sapiens	40.06	1.00e-65	242.00
IUUC-Hvu-047731	Hordeum vulgare	79.69	1.00e-125	442.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	40.06	1.00e-65	242.00
IUUC-Kpa-049249	Komagataella pastoris	33.33	5.00e-44	171.00
IUUC-Lch-050431	Latimeria chalumnae	40.33	5.00e-63	235.00
IUUC-Lpe-050830	Leersia perrieri	76.27	4.00e-147	513.00
IUUC-Lma-053026	Leptosphaeria maculans	31.90	4.00e-41	161.00
IUUC-Laf-054265	Loxodonta africana	42.92	5.00e-50	191.00
IUUC-Mcc-055583	Macaca mulatta	40.06	1.00e-65	242.00
IUUC-Meu-056113	Macropus eugenii	33.01	7.00e-44	170.00
IUUC-Mor-057267	Magnaporthe oryzae	32.19	4.00e-37	148.00
IUUC-Mpo-057502	Magnaporthe poae	31.66	8.00e-42	164.00
IUUC-Mtr-058200	Medicago truncatula	82.80	1.00e-159	555.00
IUUC-Mla-058815	Melampsora laricipopulina	34.56	7.00e-52	197.00
IUUC-Mga-059407	Meleagris gallopavo	42.02	3.00e-60	224.00
IUUC-Mvi-060411	Microbotryum violaceum	36.20	2.00e-50	192.00
IUUC-Mmr-061470	Microcebus murinus	40.06	1.00e-65	242.00
IUUC-Mdo-062860	Monodelphis domestica	40.06	4.00e-65	241.00
IUUC-Mmu-063105	Mus musculus	40.06	1.00e-65	242.00
IUUC-Mac-065314	Musa acuminata	75.84	9.00e-156	542.00
IUUC-Mpu-066472	Mustela putorius furo	42.02	3.00e-60	224.00
IUUC-Mlu-067073	Myotis lucifugus	40.00	3.00e-65	241.00
IUUC-Nfi-068284	Neosartorya fischeri	32.82	1.00e-40	160.00
IUUC-Nle-069451	Nomascus leucogenys	40.06	1.00e-65	242.00
IUUC-Opr-071112	Ochotona princeps	42.02	3.00e-60	224.00
IUUC-Ont-071988	Oreochromis niloticus	41.31	2.00e-64	240.00
IUUC-Oan-072947	Ornithorhynchus anatinus	41.63	7.00e-60	223.00
IUUC-Ocu-074969	Oryctolagus cuniculus	40.06	1.00e-65	242.00
IUUC-Oba-075394	Oryza barthii	67.27	1.00e-106	378.00
IUUC-Obr-076456	Oryza brachyantha	76.68	2.00e-147	514.00
IUUC-Ogl-076973	Oryza glaberrima	76.97	8.00e-150	522.00
IUUC-Ogu-078296	Oryza glumaepatula	66.91	3.00e-106	377.00
IUUC-Oin-079656	Oryza indica	76.66	2.00e-149	521.00
IUUC-Olo-080893	Oryza longistaminata	65.62	5.00e-121	426.00
IUUC-Ome-081559	Oryza meridionalis	72.05	4.00e-66	243.00
IUUC-Oni-083104	Oryza nivara	66.91	3.00e-106	377.00
IUUC-Opu-084098	Oryza punctata	63.26	3.00e-111	394.00
IUUC-Oru-084364	Oryza rufipogon	66.91	1.00e-106	379.00
IUUC-Osa-086296	Oryza sativa	76.66	2.00e-149	521.00
IUUC-Ola-087095	Oryzias latipes	41.35	3.00e-67	248.00
IUUC-Oga-088766	Otolemur garnettii	40.06	1.00e-65	242.00
IUUC-Oar-089565	Ovis aries	39.23	3.00e-63	234.00
IUUC-Ptr-091219	Pan troglodytes	38.46	2.00e-66	245.00
IUUC-Pan-091733	Papio anubis	40.06	1.00e-65	242.00
IUUC-Psi-092972	Pelodiscus sinensis	39.54	5.00e-61	228.00
IUUC-Pma-094332	Petromyzon marinus	38.78	2.00e-69	255.00
IUUC-Pno-094960	Phaeosphaeria nodorum	32.41	6.00e-42	164.00
IUUC-Ppa-095292	Physcomitrella patens	65.27	4.00e-123	434.00
IUUC-Pfo-096775	Poecilia formosa	41.31	2.00e-64	239.00
IUUC-Pab-098340	Pongo abelii	38.78	3.00e-67	248.00
IUUC-Pop-098907	Populus trichocarpa	81.60	5.00e-162	563.00
IUUC-Pca-100635	Procavia capensis	41.25	8.00e-59	219.00
IUUC-Ppe-101452	Prunus persica	78.77	1.00e-156	545.00
IUUC-Pva-102798	Pteropus vampyrus	40.06	2.00e-65	242.00
IUUC-Pgr-103395	Puccinia graminis	36.93	5.00e-56	211.00
IUUC-Ptt-103747	Puccinia triticina	37.82	1.00e-55	210.00
IUUC-Pte-104129	Pyrenophora teres	34.27	8.00e-40	158.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	32.04	4.00e-42	165.00
IUUC-Rno-106127	Rattus norvegicus	39.30	9.00e-62	229.00
IUUC-Sce-106257	Saccharomyces cerevisiae	31.70	4.00e-37	147.00
IUUC-Sha-107529	Sarcophilus harrisii	37.90	9.00e-62	229.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	32.73	2.00e-40	159.00
IUUC-Spo-108128	Schizosaccharomyces pombe	30.79	5.00e-39	154.00
IUUC-Smo-109591	Selaginella moellendorffii	63.99	3.00e-121	427.00
IUUC-Sit-109858	Setaria italica	77.32	3.00e-148	517.00
IUUC-Sly-111267	Solanum lycopersicum	76.40	3.00e-151	527.00
IUUC-Sar-113079	Sorex araneus	42.02	3.00e-60	224.00
IUUC-Sbi-114232	Sorghum bicolor	79.83	1.00e-111	395.00
IUUC-Sre-115157	Sporisorium reilianum	29.97	1.00e-38	153.00
IUUC-Ssc-116386	Sus scrofa	40.06	1.00e-65	242.00
IUUC-Tgu-116465	Taeniopygia guttata	41.00	4.00e-56	212.00
IUUC-Tru-117604	Takifugu rubripes	41.97	8.00e-66	244.00
IUUC-Tni-120237	Tetraodon nigroviridis	41.64	2.00e-65	243.00
IUUC-Tca-121853	Theobroma cacao	79.70	2.00e-162	564.00
IUUC-Tre-122205	Trichoderma reesei	31.12	5.00e-40	158.00
IUUC-Tvi-122471	Trichoderma virens	27.88	4.00e-29	122.00
IUUC-Tae-125200	Triticum aestivum	77.60	2.00e-151	528.00
IUUC-Tme-126883	Tuber melanosporum	33.03	3.00e-45	175.00
IUUC-Tbe-127310	Tupaia belangeri	37.50	3.00e-18	85.50
IUUC-Ttr-128307	Tursiops truncatus	42.02	3.00e-60	224.00
IUUC-Uma-129579	Ustilago maydis	33.05	2.00e-44	172.00
IUUC-Vda-129826	Verticillium dahliae	32.21	9.00e-40	157.00
IUUC-Vpa-130091	Vicugna pacos	42.02	3.00e-60	224.00
IUUC-Vvi-131587	Vitis vinifera	81.33	2.00e-162	564.00
IUUC-Xtr-132660	Xenopus tropicalis	40.33	1.00e-63	237.00
IUUC-Xma-133496	Xiphophorus maculatus	41.35	1.00e-67	249.00
IUUC-Yli-134509	Yarrowia lipolytica	31.96	2.00e-41	162.00
IUUC-Zma-134685	Zea mays	77.00	2.00e-148	517.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence