iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016959

Ensembl Protein ID

Bra021844.1-P

UniProt Accession

M4DZ97; M4DZ97_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra021844	Bra021844.1	Bra021844.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-27	93.4	179	209
UBD/Beta-Prp	1.40e-46	160.0	136	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t+++W+
   Q: 179  GHSKKVTSVKFvGDsDLVLTASADKTVRIWR 209
           8***********666***************6 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl...etgqcleetlsghdgvvn 141
           + +++++ ++++ +++++++tg+ D+t+ ++d  +g++++tl+gh+++v+s++f  ++d ++++s+d+t+r+w     +++ c + tl+ h++ v+
   Q: 136  KTNKPGICSMDILHSKDVIATGGVDATAVIFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDsgdRNYACGH-TLNDHSAEVR 230
           6788999999**9**99***************************************99**************9752216777777.9********* PP
   S: 142  cvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnde 235
            v+vh +++++vs+slD+t  ++dl++g +l + +  + ++v  ++  f+++g  l +g   + vk+wd++++  v ++ ght  v+s+ fs+n+ 
   Q: 231  AVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSD-DSEKVDYTAaaFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGY 325
           **********************************87.77777777777***********************9999*****************8888 PP
   S: 236  rlvsgssDgsiriWdlrsgdllktl 260
           +l+++++D  +r+Wdlr+  + k++
   Q: 326  FLATAAED-GVRLWDLRKLRNFKSF 349
           88888765.589***9997766665 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLSNFALEQQ LHTARQELSH ALYQHDSACR VIARLKKERD EARQLLAEVE RHIPAAPEAV 60
TANAALSNGK RAAGDEEMAP DAKKLCPGIS AEIITELTDC NAALSQKRKK RQIPETLASI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTATCAA ATTTTGCGCT GGAGCAACAA CTGCATACTG CGAGGCAAGA GCTAAGTCAT 60
GCCTTGTATC AGGTAATTTC AGTTGTGCGT TTGTGGCATG ATTTTTTTTA TATTATGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dor-030150	Dipodomys ordii	43.85	1.00e-39	157.00
IUUC-Eeu-034974	Erinaceus europaeus	44.54	2.00e-74	272.00
IUUC-Meu-056161	Macropus eugenii	44.40	3.00e-51	195.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence