iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099787

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

SPX domain-containing family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_644742; POPTR_0002s20690g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s20690	POPTR_0002s20690.1	POPTR_0002s20690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-06	29.5	216	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkw....pglknssskefrCPlCr 46
           C+iCl+  +d p++l CgH+f++ C   +     ++  + + ++ +CPlCr
   Q: 216  CSICLDTVFD-PVSLTCGHIFCHMCAcSAAsvtiVDGLKAAEPKEKCPLCR 265
           **********.9*************752225577777778999999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKFCKKYQEY MQGKENRLPA VDFKKLKKIL KKCREDFESH QEHDGQSCPH HCSVCDGTFF 60
PSLLKEMSAV VGCFNERAQK LLELHLVSGF RKYFMWFKGK LQKKHVAFIQ EGKDLVTYAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAAAAG ATTCGTAGTA TCCAAGAAAT TGACTATTTC TCTCGGTCAT CTCCTCAGGT 60
TGTCCTAGAT GTACGTCTCT AAGCACTCCA AACAGTTGAA CACCCAGAGA CAGAGACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033326--BAH1
IPR004331--SPX_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51382--SPX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

KEGG

pop:POPTR_0002s20690g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005017	Anolis carolinensis	37.66	1.00e-07	50.40
IUUC-Ang-009772	Aspergillus niger	39.34	1.00e-07	49.30
IUUC-Ate-010384	Aspergillus terreus	42.62	5.00e-08	50.10
IUUC-Cho-024585	Choloepus hoffmanni	44.64	3.00e-08	52.80
IUUC-Meu-056070	Macropus eugenii	35.11	8.00e-09	54.70
IUUC-Opu-084051	Oryza punctata	56.04	1.00e-94	338.00
IUUC-Pma-094166	Petromyzon marinus	46.94	1.00e-06	44.30
IUUC-Pgr-103338	Puccinia graminis	34.29	5.00e-06	43.90
IUUC-Ptt-103920	Puccinia triticina	38.57	1.00e-05	42.70
IUUC-Sit-110105	Setaria italica	68.63	7.00e-120	422.00
IUUC-Vda-129783	Verticillium dahliae	24.46	9.00e-08	51.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence