iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000003233.1	ENSONIT00000004061.1	ENSONIP00000004060.1
ENSONIG00000003233.1	ENSONIT00000004062.1	ENSONIP00000004061.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.00e-11	43.5	291	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de +l+ ++eMGF+re+a+qaL ++nnnle+A++ Ll+g
   Q: 291  DERALRHIMEMGFNREAARQALMDNNNNLEVALNSLLTG 329
           7889*********************************97 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MTDLTDSLTK EGWYLSDEGI AELKGSAEKI THSDIIRIAL DTDLRTVGRK YLPSDINSGR 60
TEKLEGPCVL QVQKVRNISA PKDHEESQGA PRMLRLQMTD GHTTCVGLEF KHLSKISFNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCACTCCG TACTTGTACA GTGTCATTGT GTGACGTATG TACCGTAGAG TCGTTCAGTA 60
CTGATATTAG CGAGCTTTGT CTGGAGCAGA ATATGAATTA CAGGACGAGA TAGCTGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.48	5.00e-16	78.60
IUUC-Aml-001751	Ailuropoda melanoleuca	47.85	2.00e-167	582.00
IUUC-Atr-002788	Amborella trichopoda	32.12	1.00e-23	104.00
IUUC-Apl-004055	Anas platyrhynchos	46.50	2.00e-143	503.00
IUUC-Aca-004367	Anolis carolinensis	54.99	6.00e-138	484.00
IUUC-Aly-006072	Arabidopsis lyrata	31.61	3.00e-23	102.00
IUUC-Ath-007491	Arabidopsis thaliana	32.65	1.00e-23	104.00
IUUC-Ame-011439	Astyanax mexicanus	58.05	0.00e+00	695.00
IUUC-Bta-012894	Bos taurus	46.97	4.00e-161	561.00
IUUC-Bdi-014462	Brachypodium distachyon	33.51	1.00e-21	97.80
IUUC-Bol-015343	Brassica oleracea	32.32	8.00e-23	101.00
IUUC-Bra-016787	Brassica rapa	36.91	3.00e-22	99.80
IUUC-Cel-018154	Caenorhabditis elegans	32.78	1.00e-30	128.00
IUUC-Cja-019364	Callithrix jacchus	46.13	2.00e-135	476.00
IUUC-Cfa-021166	Canis familiaris	47.47	1.00e-161	563.00
IUUC-Cpo-021678	Cavia porcellus	48.86	4.00e-75	275.00
IUUC-Csa-023299	Chlorocebus sabaeus	55.47	6.00e-142	498.00
IUUC-Cho-024694	Choloepus hoffmanni	60.40	7.00e-84	305.00
IUUC-Cin-025191	Ciona intestinalis	40.69	2.00e-40	158.00
IUUC-Csv-026348	Ciona savignyi	41.25	7.00e-11	58.90
IUUC-Dre-028715	Danio rerio	57.85	0.00e+00	723.00
IUUC-Dno-030091	Dasypus novemcinctus	46.98	2.00e-166	579.00
IUUC-Dor-030807	Dipodomys ordii	40.56	3.00e-103	369.00
IUUC-Dme-031770	Drosophila melanogaster	30.39	1.00e-39	158.00
IUUC-Ete-032507	Echinops telfairi	46.55	3.00e-26	113.00
IUUC-Eca-033406	Equus caballus	44.24	4.00e-108	385.00
IUUC-Eeu-034600	Erinaceus europaeus	38.99	5.00e-67	249.00
IUUC-Fca-035916	Felis catus	48.03	3.00e-168	585.00
IUUC-Fal-036658	Ficedula albicollis	47.15	3.00e-164	572.00
IUUC-Gmo-038974	Gadus morhua	64.24	1.00e-129	457.00
IUUC-Gga-040195	Gallus gallus	47.64	4.00e-176	611.00
IUUC-Gac-042537	Gasterosteus aculeatus	77.47	0.00e+00	1050.00
IUUC-Gma-044234	Glycine max	33.33	4.00e-24	106.00
IUUC-Ggo-044715	Gorilla gorilla	44.76	7.00e-140	491.00
IUUC-Hsa-045814	Homo sapiens	47.37	8.00e-180	624.00
IUUC-Hvu-047365	Hordeum vulgare	33.33	4.00e-17	82.40
IUUC-Itr-047866	Ictidomys tridecemlineatus	48.91	4.00e-169	588.00
IUUC-Lch-050393	Latimeria chalumnae	48.62	2.00e-170	593.00
IUUC-Lpe-050691	Leersia perrieri	32.18	9.00e-21	94.70
IUUC-Loc-052859	Lepisosteus oculatus	55.70	0.00e+00	708.00
IUUC-Laf-053953	Loxodonta africana	39.32	3.00e-66	246.00
IUUC-Mcc-055846	Macaca mulatta	60.64	5.00e-138	485.00
IUUC-Meu-056790	Macropus eugenii	55.41	8.00e-66	244.00
IUUC-Mtr-058749	Medicago truncatula	31.79	2.00e-20	94.00
IUUC-Mla-058959	Melampsora laricipopulina	35.38	4.00e-04	39.30
IUUC-Mga-059656	Meleagris gallopavo	48.07	2.00e-166	579.00
IUUC-Mmr-061089	Microcebus murinus	46.38	9.00e-155	540.00
IUUC-Mdo-063043	Monodelphis domestica	49.76	2.00e-88	319.00
IUUC-Mmu-063654	Mus musculus	60.05	1.00e-125	443.00
IUUC-Mac-064947	Musa acuminata	35.29	8.00e-20	91.70
IUUC-Mpu-066115	Mustela putorius furo	44.41	2.00e-109	390.00
IUUC-Mlu-066974	Myotis lucifugus	44.36	1.00e-131	463.00
IUUC-Nle-069184	Nomascus leucogenys	48.89	2.00e-180	626.00
IUUC-Opr-070770	Ochotona princeps	40.88	5.00e-109	388.00
IUUC-Oan-073448	Ornithorhynchus anatinus	53.54	2.00e-31	129.00
IUUC-Ocu-074405	Oryctolagus cuniculus	49.24	7.00e-175	607.00
IUUC-Oba-075977	Oryza barthii	31.84	4.00e-16	79.00
IUUC-Obr-076298	Oryza brachyantha	30.20	2.00e-19	90.10
IUUC-Ogl-077706	Oryza glaberrima	31.84	1.00e-16	81.30
IUUC-Ogu-078381	Oryza glumaepatula	31.84	1.00e-16	80.90
IUUC-Oin-080150	Oryza indica	31.82	2.00e-16	80.10
IUUC-Ome-081153	Oryza meridionalis	32.18	9.00e-16	78.20
IUUC-Oni-083115	Oryza nivara	31.82	2.00e-15	77.00
IUUC-Opu-083860	Oryza punctata	31.47	2.00e-20	94.00
IUUC-Oru-084859	Oryza rufipogon	31.84	1.00e-16	81.30
IUUC-Osa-085567	Oryza sativa	32.34	2.00e-15	77.00
IUUC-Ola-087049	Oryzias latipes	73.98	0.00e+00	1040.00
IUUC-Oga-088455	Otolemur garnettii	48.99	3.00e-174	605.00
IUUC-Oar-090096	Ovis aries	49.11	1.00e-172	600.00
IUUC-Ptr-090974	Pan troglodytes	45.50	9.00e-141	494.00
IUUC-Pan-092657	Papio anubis	60.36	4.00e-141	495.00
IUUC-Psi-093113	Pelodiscus sinensis	45.21	5.00e-137	481.00
IUUC-Pma-094508	Petromyzon marinus	47.22	2.00e-04	41.60
IUUC-Ppa-095466	Physcomitrella patens	40.14	1.00e-25	110.00
IUUC-Pfo-096631	Poecilia formosa	77.69	0.00e+00	1116.00
IUUC-Pab-098070	Pongo abelii	48.52	1.00e-178	619.00
IUUC-Pop-099235	Populus trichocarpa	32.51	1.00e-21	97.80
IUUC-Pca-101032	Procavia capensis	64.41	1.00e-79	291.00
IUUC-Ppe-101793	Prunus persica	33.33	1.00e-21	97.80
IUUC-Pva-102290	Pteropus vampyrus	46.02	3.00e-135	475.00
IUUC-Rno-105080	Rattus norvegicus	54.42	3.00e-81	296.00
IUUC-Sha-107598	Sarcophilus harrisii	44.49	3.00e-151	529.00
IUUC-Sit-110735	Setaria italica	31.96	5.00e-20	92.40
IUUC-Sly-111126	Solanum lycopersicum	37.09	5.00e-20	92.00
IUUC-Stu-112780	Solanum tuberosum	34.74	1.00e-24	107.00
IUUC-Sar-113418	Sorex araneus	45.49	5.00e-123	435.00
IUUC-Sbi-113925	Sorghum bicolor	32.47	8.00e-22	98.20
IUUC-Sre-114917	Sporisorium reilianum	35.71	2.00e-06	47.00
IUUC-Ssc-115712	Sus scrofa	49.37	8.00e-174	604.00
IUUC-Tgu-117148	Taeniopygia guttata	47.36	1.00e-174	607.00
IUUC-Tru-117831	Takifugu rubripes	72.94	0.00e+00	1011.00
IUUC-Tsy-118917	Tarsius syrichta	44.48	2.00e-117	416.00
IUUC-Tni-120783	Tetraodon nigroviridis	71.32	0.00e+00	978.00
IUUC-Tca-121430	Theobroma cacao	36.00	1.00e-06	47.80
IUUC-Tvi-122577	Trichoderma virens	24.84	6.40e-01	30.80
IUUC-Tae-123752	Triticum aestivum	34.48	2.00e-16	80.10
IUUC-Tur-126238	Triticum urartu	31.97	7.00e-15	75.10
IUUC-Tbe-127989	Tupaia belangeri	41.18	1.00e-04	42.70
IUUC-Ttr-128615	Tursiops truncatus	41.86	9.00e-106	377.00
IUUC-Vpa-130531	Vicugna pacos	47.32	5.00e-135	474.00
IUUC-Vvi-131607	Vitis vinifera	30.69	1.00e-16	81.30
IUUC-Xtr-132787	Xenopus tropicalis	46.34	8.00e-147	514.00
IUUC-Xma-133815	Xiphophorus maculatus	75.16	0.00e+00	1013.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence