iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114826

Ensembl Protein ID

Sb01g047350.1

UniProt Accession

A0A1B6QQJ8; A0A1B6QQJ8_SORBI

Genbank Protein ID

KXG40200.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G507400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g047350	Sb01g047350.1	Sb01g047350.1
Sb01g047350	Sb01g047350.2	Sb01g047350.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.90e-09	36.8	188	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkC 51
           ++C +C + + +e  +v C++  C+ ew+H++C++ +   e+p+ + w+Cp+C
   Q: 188  TYC-LCNQVSYGE--MVACDNpnCKiEWYHYGCVGVK---EQPKGK-WYCPNC 233
           69*.*******99..**********************...999997.****** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFLEDFQAS VEALPSMLHR NYSLMRELDK SLQGVQLENE QRCQQEIEDI KHGLESGSIT 60
YDPAKLKFSE EAIEEQKHCV RIADEKVALA TQTYDLVDAH IQQLDQFMRK LEEIRQEKES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCTGCCGC GCCGGCCGGC CGGCGAGCCT CTTCCTCTTC TTCCGGTCGC TCCCCTTCCC 60
CGCATCTTGA TTTGGATTCT CTGGTGGCTG GGAGAGCCTG CGAGAGGGTG ACAACCGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001338	Ailuropoda melanoleuca	36.05	1.00e-37	149.00
IUUC-Atr-002906	Amborella trichopoda	52.24	3.00e-65	240.00
IUUC-Apl-004097	Anas platyrhynchos	34.98	8.00e-37	145.00
IUUC-Aca-004593	Anolis carolinensis	35.06	2.00e-38	151.00
IUUC-Aly-005815	Arabidopsis lyrata	48.97	3.00e-53	200.00
IUUC-Ath-006765	Arabidopsis thaliana	51.64	7.00e-58	215.00
IUUC-Acl-008091	Aspergillus clavatus	53.12	2.00e-18	86.70
IUUC-Ate-010297	Aspergillus terreus	53.12	4.00e-18	85.90
IUUC-Ame-011879	Astyanax mexicanus	35.83	4.00e-38	150.00
IUUC-Bta-012699	Bos taurus	36.00	2.00e-38	150.00
IUUC-Bdi-014504	Brachypodium distachyon	81.38	5.00e-103	365.00
IUUC-Bol-015245	Brassica oleracea	49.18	3.00e-61	227.00
IUUC-Bra-017027	Brassica rapa	49.59	4.00e-61	226.00
IUUC-Cja-019988	Callithrix jacchus	35.14	2.00e-36	144.00
IUUC-Cfa-021282	Canis familiaris	35.14	2.00e-36	144.00
IUUC-Cpo-022011	Cavia porcellus	35.06	2.00e-38	151.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	38.51	7.00e-27	113.00
IUUC-Csa-023203	Chlorocebus sabaeus	35.14	2.00e-36	144.00
IUUC-Cho-024577	Choloepus hoffmanni	71.93	4.00e-26	110.00
IUUC-Cin-025479	Ciona intestinalis	36.82	1.00e-37	148.00
IUUC-Csv-025900	Ciona savignyi	66.67	5.00e-25	107.00
IUUC-Cne-027005	Cryptococcus neoformans	41.94	3.00e-12	65.10
IUUC-Cme-027118	Cyanidioschyzon merolae	44.12	6.00e-04	38.90
IUUC-Dre-027430	Danio rerio	35.68	1.00e-39	155.00
IUUC-Dno-029766	Dasypus novemcinctus	34.51	9.00e-35	139.00
IUUC-Dor-030910	Dipodomys ordii	65.28	8.00e-27	112.00
IUUC-Dme-032200	Drosophila melanogaster	62.69	3.00e-27	114.00
IUUC-Ete-032510	Echinops telfairi	63.64	7.00e-26	110.00
IUUC-Eca-033565	Equus caballus	35.46	2.00e-38	151.00
IUUC-Eeu-034948	Erinaceus europaeus	33.08	2.00e-33	134.00
IUUC-Fca-036368	Felis catus	35.14	2.00e-36	144.00
IUUC-Fal-036998	Ficedula albicollis	37.19	2.00e-38	151.00
IUUC-Fox-037925	Fusarium oxysporum	61.11	2.00e-17	82.80
IUUC-Gmo-038982	Gadus morhua	36.15	3.00e-40	157.00
IUUC-Gga-040578	Gallus gallus	37.50	2.00e-39	154.00
IUUC-Gac-042184	Gasterosteus aculeatus	36.92	6.00e-40	156.00
IUUC-Gma-044339	Glycine max	53.25	3.00e-72	263.00
IUUC-Ggo-045559	Gorilla gorilla	35.14	2.00e-36	144.00
IUUC-Hsa-046852	Homo sapiens	35.14	2.00e-36	144.00
IUUC-Hvu-047046	Hordeum vulgare	77.87	5.00e-94	336.00
IUUC-Itr-047978	Ictidomys tridecemlineatus	35.46	2.00e-38	150.00
IUUC-Kpa-049229	Komagataella pastoris	58.33	1.00e-15	75.90
IUUC-Lch-050397	Latimeria chalumnae	33.58	8.00e-32	129.00
IUUC-Lpe-050822	Leersia perrieri	84.15	7.00e-105	372.00
IUUC-Loc-052725	Lepisosteus oculatus	36.36	9.00e-38	149.00
IUUC-Lma-053234	Leptosphaeria maculans	50.00	2.00e-15	77.00
IUUC-Laf-054057	Loxodonta africana	35.14	2.00e-36	144.00
IUUC-Mcc-055212	Macaca mulatta	34.87	1.00e-35	142.00
IUUC-Meu-056511	Macropus eugenii	34.45	1.00e-33	135.00
IUUC-Mtr-058089	Medicago truncatula	53.04	1.00e-66	244.00
IUUC-Mga-059967	Meleagris gallopavo	35.25	3.00e-37	147.00
IUUC-Mmr-060843	Microcebus murinus	36.33	9.00e-38	149.00
IUUC-Mdo-062357	Monodelphis domestica	35.06	2.00e-38	151.00
IUUC-Mmu-064093	Mus musculus	35.06	2.00e-38	151.00
IUUC-Mac-064625	Musa acuminata	67.08	1.00e-85	308.00
IUUC-Mpu-066302	Mustela putorius furo	34.16	7.00e-37	146.00
IUUC-Mlu-068192	Myotis lucifugus	34.16	8.00e-37	145.00
IUUC-Nle-069062	Nomascus leucogenys	35.14	2.00e-36	144.00
IUUC-Opr-070207	Ochotona princeps	35.66	5.00e-36	143.00
IUUC-Ont-072446	Oreochromis niloticus	35.56	5.00e-39	153.00
IUUC-Oan-073652	Ornithorhynchus anatinus	36.07	4.00e-36	143.00
IUUC-Ocu-074235	Oryctolagus cuniculus	35.52	5.00e-37	146.00
IUUC-Obr-076266	Oryza brachyantha	82.52	4.00e-105	373.00
IUUC-Ogl-077118	Oryza glaberrima	81.64	2.00e-103	367.00
IUUC-Oin-079049	Oryza indica	81.96	2.00e-103	367.00
IUUC-Ome-081291	Oryza meridionalis	82.61	9.00e-104	368.00
IUUC-Oni-082218	Oryza nivara	81.96	2.00e-103	367.00
IUUC-Opu-084171	Oryza punctata	83.06	9.00e-100	355.00
IUUC-Osa-085563	Oryza sativa	82.21	9.00e-104	368.00
IUUC-Ola-087103	Oryzias latipes	34.43	2.00e-36	144.00
IUUC-Oga-089123	Otolemur garnettii	35.14	2.00e-36	144.00
IUUC-Oar-089524	Ovis aries	36.00	2.00e-38	150.00
IUUC-Ptr-090908	Pan troglodytes	35.14	2.00e-36	144.00
IUUC-Pan-092837	Papio anubis	36.05	9.00e-38	149.00
IUUC-Psi-093828	Pelodiscus sinensis	35.00	6.00e-36	143.00
IUUC-Pma-094144	Petromyzon marinus	65.15	4.00e-25	105.00
IUUC-Pfo-096617	Poecilia formosa	35.14	1.00e-39	155.00
IUUC-Pab-097978	Pongo abelii	34.66	2.00e-32	131.00
IUUC-Pop-099415	Populus trichocarpa	52.05	3.00e-67	247.00
IUUC-Pca-100475	Procavia capensis	31.20	4.00e-29	120.00
IUUC-Ppe-101441	Prunus persica	53.39	2.00e-72	264.00
IUUC-Pva-102325	Pteropus vampyrus	35.46	2.00e-38	151.00
IUUC-Rno-105178	Rattus norvegicus	36.03	4.00e-40	156.00
IUUC-Sha-106773	Sarcophilus harrisii	35.06	2.00e-38	152.00
IUUC-Smo-109441	Selaginella moellendorffii	41.08	1.00e-50	191.00
IUUC-Sit-109827	Setaria italica	89.30	1.00e-109	387.00
IUUC-Sly-111750	Solanum lycopersicum	54.92	2.00e-75	274.00
IUUC-Stu-112250	Solanum tuberosum	55.33	2.00e-75	274.00
IUUC-Sar-113193	Sorex araneus	68.85	3.00e-26	111.00
IUUC-Sre-115124	Sporisorium reilianum	56.92	2.00e-21	97.10
IUUC-Ssc-115797	Sus scrofa	35.63	4.00e-36	143.00
IUUC-Tgu-117270	Taeniopygia guttata	35.06	2.00e-38	151.00
IUUC-Tru-118253	Takifugu rubripes	35.25	2.00e-39	154.00
IUUC-Tsy-119035	Tarsius syrichta	63.64	7.00e-26	110.00
IUUC-Tni-120024	Tetraodon nigroviridis	34.98	1.00e-34	139.00
IUUC-Tca-121597	Theobroma cacao	62.73	8.00e-39	152.00
IUUC-Tre-121950	Trichoderma reesei	55.22	2.00e-18	86.70
IUUC-Tvi-122341	Trichoderma virens	55.36	2.00e-14	70.50
IUUC-Tae-123043	Triticum aestivum	76.36	3.00e-95	340.00
IUUC-Tbe-127558	Tupaia belangeri	36.05	1.00e-37	149.00
IUUC-Ttr-128512	Tursiops truncatus	68.85	3.00e-26	112.00
IUUC-Uma-129581	Ustilago maydis	59.02	4.00e-20	92.40
IUUC-Vpa-130063	Vicugna pacos	28.63	1.00e-25	108.00
IUUC-Vvi-131487	Vitis vinifera	55.51	5.00e-74	269.00
IUUC-Xtr-132189	Xenopus tropicalis	35.80	3.00e-36	144.00
IUUC-Xma-133297	Xiphophorus maculatus	35.95	9.00e-39	152.00
IUUC-Yli-134326	Yarrowia lipolytica	54.84	4.00e-18	84.30
IUUC-Zma-135298	Zea mays	92.37	2.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence