• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105443
UUCD1 version UUC-RaN-00029
Ensembl Protein ID ENSRNOP00000004192.3
UniProt Accession B1WBW7; B1WBW7_RAT
Genbank Protein ID AAI61916.1
Protein Name TNF receptor-associated factor 7; Traf7 protein
Genbank Nucleotide ID AC103090
Gene Name Traf7
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000003131.7 ENSRNOT00000004192.4 ENSRNOP00000004192.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-31 106.2 393 424
UBD/Beta-Prp 2.00e-48 165.5 393 669
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v+cl+  s  +ll sGs D+tikvWD+
   Q: 393  GHQGPVWCLCVySMgDLLFSGSSDKTIKVWDT 424
           8*********778889***************6 PP
   

   UBD/Beta-Prp
   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdv.ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           gh+  ++ c+++   ++ll++gs d+tikvwd+ tt k+ ++l+gh++ v a++++     l +gs D ti vwd+++ + v t+++h+
   Q: 393  GHQG-PVWCLCVYSMGDLLFSGSSDKTIKVWDTcTTYKCQKTLEGHDGIVLALCIQGC--KLYSGSADCTIIVWDIQNLQKVNTIRAHD 478
           5555.55569999*******************846678899***************99..6**************************** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
           + v++l +s   + l sGs  + i+vwd+  t+ +l++ l+g +++v+ +v  +  ++l sGs+ +t+++Wd++t ++++ l+    +s
   Q: 479  NPVCTLVSSH--NMLFSGS-LKAIKVWDIvGTELKLKKELTGLNHWVRALVAAQ--SYLYSGSY-QTIKIWDIRTLDCIHVLQT-SGGS 560
           *****99999..9******.9*******7368888888**************99..*******9.79***************99.**** PP
   S: 183  vyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
           vys++++    ++v g + + + +wd++++e vrtl+gh  +v+ +++   p+++ + s+s D+s+r+W +++  +++tl +h+ sv++
   Q: 561  VYSIAVTN--HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVIstPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTA 647
           *******9..8***********************************99888************************************** PP
   S: 270  vavlsfgdnvlvlgsedskvniwkl 294
            av   ++  l++g+ ds+v++w +
   Q: 648  LAV---SRGRLFSGAVDSTVKVWTC 669
           **9...*****************86 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSSAKSARYN RFSGGPANLP ASDSSGTRME TTFGPTFSTV TTITKADGTS TYKQHRRTPS 60
SSSTLAYSPR DEEDGMPPIN TPRRSDSAIS VRSLHSESSM SLRSTFSLPE EEEEPEPLVF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105443|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCCGAGAGG GGCAAGATGA TGCCGGAGGG TGTAGCCGCT GCTCCCAGGC AGCTGCGGGC 60
GGGTGAGTGA GTGCGCCGCG CACTGGACCT GGGACTCCGT CTTCCGCGGA GTGCGGTGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105443|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001370--BIR_rpt
IPR020472--G-protein_beta_WD-40_rep
IPR008974--TRAF-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF
Pfam

PF00400--WD40
PF13445--zf-RING_UBOX
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00184--RING
SM00320--WD40
Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0005886--C:plasma membrane
GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000185--P:activation of MAPKKK activity
GO:0006915--P:apoptotic process
GO:2001235--P:positive regulation of apoptotic signaling pathway
GO:0016567--P:protein ubiquitination
KEGG rno:360491
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001971 Ailuropoda melanoleuca 96.29 0.00e+00 1248.00
IUUC-Apl-004098 Anas platyrhynchos 95.16 0.00e+00 1204.00
IUUC-Aca-004852 Anolis carolinensis 88.34 0.00e+00 974.00
IUUC-Ame-011275 Astyanax mexicanus 83.11 0.00e+00 938.00
IUUC-Bta-013153 Bos taurus 97.31 0.00e+00 1273.00
IUUC-Cja-019243 Callithrix jacchus 96.18 0.00e+00 1224.00
IUUC-Cfa-020036 Canis familiaris 97.76 0.00e+00 1281.00
IUUC-Cpo-022194 Cavia porcellus 97.60 0.00e+00 1273.00
IUUC-Csa-023363 Chlorocebus sabaeus 97.61 0.00e+00 1279.00
IUUC-Cin-025279 Ciona intestinalis 58.92 0.00e+00 804.00
IUUC-Csv-026163 Ciona savignyi 64.73 0.00e+00 773.00
IUUC-Dre-027998 Danio rerio 90.80 0.00e+00 1118.00
IUUC-Dno-029356 Dasypus novemcinctus 96.43 3.00e-131 460.00
IUUC-Dor-030750 Dipodomys ordii 95.67 0.00e+00 1234.00
IUUC-Eca-033671 Equus caballus 81.75 0.00e+00 983.00
IUUC-Eeu-034765 Erinaceus europaeus 97.70 4.00e-166 578.00
IUUC-Fca-035843 Felis catus 97.76 0.00e+00 1283.00
IUUC-Fal-037237 Ficedula albicollis 93.73 0.00e+00 1241.00
IUUC-Gmo-038779 Gadus morhua 81.98 0.00e+00 1013.00
IUUC-Gga-040579 Gallus gallus 92.99 0.00e+00 1231.00
IUUC-Gac-042233 Gasterosteus aculeatus 86.43 0.00e+00 1126.00
IUUC-Gma-044293 Glycine max 26.81 3.00e-19 89.70
IUUC-Ggo-045147 Gorilla gorilla 97.01 0.00e+00 1272.00
IUUC-Hsa-046117 Homo sapiens 97.01 0.00e+00 1274.00
IUUC-Itr-048899 Ictidomys tridecemlineatus 97.76 0.00e+00 1282.00
IUUC-Lch-050593 Latimeria chalumnae 91.21 0.00e+00 1188.00
IUUC-Loc-052444 Lepisosteus oculatus 90.67 0.00e+00 1223.00
IUUC-Laf-053499 Loxodonta africana 90.82 0.00e+00 1175.00
IUUC-Mcc-055038 Macaca mulatta 97.46 0.00e+00 1277.00
IUUC-Meu-056610 Macropus eugenii 95.21 0.00e+00 946.00
IUUC-Mtr-057641 Medicago truncatula 27.73 2.00e-19 90.10
IUUC-Mga-060183 Meleagris gallopavo 92.56 0.00e+00 1224.00
IUUC-Mmr-061133 Microcebus murinus 95.68 0.00e+00 1202.00
IUUC-Mdo-062312 Monodelphis domestica 96.27 0.00e+00 1266.00
IUUC-Mmu-063844 Mus musculus 99.40 0.00e+00 1272.00
IUUC-Mpu-066552 Mustela putorius furo 97.31 0.00e+00 1248.00
IUUC-Mlu-067719 Myotis lucifugus 97.31 0.00e+00 1245.00
IUUC-Nle-070045 Nomascus leucogenys 97.92 0.00e+00 1196.00
IUUC-Opr-070927 Ochotona princeps 94.48 0.00e+00 1215.00
IUUC-Ont-072680 Oreochromis niloticus 86.02 0.00e+00 1145.00
IUUC-Oan-073521 Ornithorhynchus anatinus 94.00 2.00e-52 196.00
IUUC-Ogu-077987 Oryza glumaepatula 25.86 4.00e-19 89.40
IUUC-Oru-085210 Oryza rufipogon 25.60 2.00e-19 90.10
IUUC-Ola-087454 Oryzias latipes 89.62 0.00e+00 1188.00
IUUC-Oga-088380 Otolemur garnettii 97.16 0.00e+00 1273.00
IUUC-Oar-089558 Ovis aries 79.74 0.00e+00 1011.00
IUUC-Ptr-091606 Pan troglodytes 97.01 0.00e+00 1272.00
IUUC-Pan-092227 Papio anubis 97.46 0.00e+00 1277.00
IUUC-Psi-093853 Pelodiscus sinensis 86.94 0.00e+00 1024.00
IUUC-Pma-094541 Petromyzon marinus 81.96 6.00e-156 543.00
IUUC-Pfo-096237 Poecilia formosa 86.13 0.00e+00 1140.00
IUUC-Pab-097589 Pongo abelii 97.16 0.00e+00 1274.00
IUUC-Pca-100375 Procavia capensis 93.98 0.00e+00 1187.00
IUUC-Pva-102434 Pteropus vampyrus 97.76 0.00e+00 1279.00
IUUC-Sha-106517 Sarcophilus harrisii 95.98 0.00e+00 1260.00
IUUC-Ssc-115990 Sus scrofa 96.57 0.00e+00 1264.00
IUUC-Tgu-117222 Taeniopygia guttata 93.25 0.00e+00 1228.00
IUUC-Tru-118392 Takifugu rubripes 89.04 0.00e+00 1147.00
IUUC-Tni-120220 Tetraodon nigroviridis 88.50 0.00e+00 1138.00
IUUC-Tca-121793 Theobroma cacao 27.11 1.00e-20 94.40
IUUC-Tbe-128045 Tupaia belangeri 99.31 1.00e-161 563.00
IUUC-Ttr-128203 Tursiops truncatus 94.03 0.00e+00 1213.00
IUUC-Xtr-132043 Xenopus tropicalis 91.64 0.00e+00 1240.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved