iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010964

Ensembl Protein ID

ENSAMXP00000010490.1

UniProt Accession

W5KSC8; W5KSC8_ASTMX

Genbank Protein ID

ENSAMXP00000010490

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01033779

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000010216.1	ENSAMXT00000010490.1	ENSAMXP00000010490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-06	26.9	12	77
E3 activity/RING/RING	1.30e-06	29.1	16	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk...tcPvtrqplteedlvPnltlrrliqa 67
           e+++Cp+ le++++P +l++G++y r +++  ++ +     +cPv+r  ++ ++  Pn +l r+++a
   Q: 12   EQLRCPVCLEVFSEPLMLQCGHSYCRGCVRS-MDMDPLgqlQCPVCRCAVDGDSPPPNVALARIVDA 77
           789**************************88.4333325579******************9998876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle f++ pl l+CgH +++ C+  + ++     ++ +CP+Cr
   Q: 16   CPVCLEVFSE-PLMLQCGHSYCRGCVRSM-DMD--PLGQLQCPVCR 57
           **********.999***********9666.333..56899*****8 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MDRRCSLEPL EEQLRCPVCL EVFSEPLMLQ CGHSYCRGCV RSMDMDPLGQ LQCPVCRCAV 60
DGDSPPPNVA LARIVDALRE ISGPGQGPQE TCSQHHNPLS LYCEDDQALI CGLCGSIGGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAGAC GCTGCAGTCT GGAGCCACTG GAGGAGCAAC TGCGCTGCCC GGTGTGTCTG 60
GAGGTCTTCT CTGAGCCTCT TATGCTGCAA TGTGGTCACT CCTACTGTCG TGGCTGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	54.18	2.00e-160	558.00
IUUC-Apl-004051	Anas platyrhynchos	56.65	2.00e-157	548.00
IUUC-Aca-004755	Anolis carolinensis	30.42	2.00e-76	279.00
IUUC-Bta-012642	Bos taurus	53.70	4.00e-158	550.00
IUUC-Cja-019011	Callithrix jacchus	51.80	6.00e-141	494.00
IUUC-Cfa-020270	Canis familiaris	52.28	9.00e-155	540.00
IUUC-Cpo-022458	Cavia porcellus	53.52	3.00e-156	544.00
IUUC-Csa-023478	Chlorocebus sabaeus	54.64	5.00e-158	550.00
IUUC-Dno-028894	Dasypus novemcinctus	54.16	2.00e-154	539.00
IUUC-Dor-030228	Dipodomys ordii	50.87	2.00e-134	472.00
IUUC-Eca-033497	Equus caballus	53.35	8.00e-157	546.00
IUUC-Eeu-034910	Erinaceus europaeus	47.51	1.00e-79	289.00
IUUC-Fca-036164	Felis catus	53.77	4.00e-159	554.00
IUUC-Gga-040573	Gallus gallus	45.53	1.00e-87	317.00
IUUC-Ggo-044471	Gorilla gorilla	54.33	7.00e-157	546.00
IUUC-Hsa-046039	Homo sapiens	54.33	9.00e-157	546.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	54.23	5.00e-152	530.00
IUUC-Lch-050638	Latimeria chalumnae	62.02	3.00e-173	601.00
IUUC-Loc-051971	Lepisosteus oculatus	76.14	0.00e+00	761.00
IUUC-Laf-054291	Loxodonta africana	53.70	8.00e-154	536.00
IUUC-Mcc-055708	Macaca mulatta	54.43	3.00e-157	548.00
IUUC-Meu-056670	Macropus eugenii	50.00	1.00e-91	330.00
IUUC-Mga-059415	Meleagris gallopavo	56.01	3.00e-158	551.00
IUUC-Mmr-061410	Microcebus murinus	53.94	7.00e-151	526.00
IUUC-Mdo-062252	Monodelphis domestica	31.54	3.00e-79	288.00
IUUC-Mmu-064094	Mus musculus	53.56	1.00e-156	546.00
IUUC-Mpu-065781	Mustela putorius furo	53.97	1.00e-159	555.00
IUUC-Mlu-067974	Myotis lucifugus	53.36	4.00e-156	544.00
IUUC-Nle-069000	Nomascus leucogenys	54.33	6.00e-157	547.00
IUUC-Opr-071216	Ochotona princeps	61.61	7.00e-79	287.00
IUUC-Oan-072738	Ornithorhynchus anatinus	31.09	1.00e-76	280.00
IUUC-Ocu-074859	Oryctolagus cuniculus	52.88	6.00e-152	530.00
IUUC-Oga-088285	Otolemur garnettii	54.16	5.00e-157	547.00
IUUC-Oar-090161	Ovis aries	47.68	7.00e-133	467.00
IUUC-Ptr-091672	Pan troglodytes	54.33	7.00e-157	546.00
IUUC-Pan-092870	Papio anubis	54.22	8.00e-157	546.00
IUUC-Psi-093742	Pelodiscus sinensis	59.41	1.00e-170	592.00
IUUC-Pab-098034	Pongo abelii	54.76	2.00e-158	552.00
IUUC-Pca-100618	Procavia capensis	28.90	2.00e-68	253.00
IUUC-Pva-103234	Pteropus vampyrus	54.09	4.00e-155	541.00
IUUC-Rno-105163	Rattus norvegicus	54.38	6.00e-157	547.00
IUUC-Sha-106575	Sarcophilus harrisii	49.31	1.00e-68	254.00
IUUC-Ssc-115600	Sus scrofa	53.56	4.00e-158	551.00
IUUC-Tbe-128151	Tupaia belangeri	53.48	1.00e-59	222.00
IUUC-Ttr-128947	Tursiops truncatus	54.18	5.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence