iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044206

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835

Gene Name

LOC100813745; GLYMA_02G267800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G43540	GLYMA02G43540.1	GLYMA02G43540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-30	103.8	541	578
E3 activity/RING/U-box	8.20e-10	40.2	40	105
UBD/Beta-Prp	1.80e-41	143.9	365	666

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH   v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 541  GHRKAVSYVKFlSNDELASASTDSTLRLWDVKENLPVR 578
           79999******98899**************99887765 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           ++flCpI +++ +dP  +++G+++   +I  +l+++   cP ++  lt+++l Pnl l +l ++  +
   Q: 40   KDFLCPICMQIIKDPFLTACGHSFCYMCIITHLRNKSD-CPCCGDYLTNTNLFPNLLLDKLLKKTSA 105
           68*********************************999.*****************99888777655 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghe 94
            + ++++ f +d++l+at++ +++ikv+d++            + ++s  + + +++++++ +k  ++++   +++ vwd+ t+k ++ +++he
   Q: 365  ANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNeptdahcpVVEMSTRS-KLSCLSWNKFAKnQIASSDYEGIVTVWDVTTRKSLMEYEEHE 457
           567899*************************95558888888777776666.699999998876456666666********************* PP
   S: 95   dsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvys 185
           ++++s++fs+++ + lvsGs+d  +++w ++++  + +++   ++ ++cv+++p + n+++ Gs+D  +  +dl +  + ++ ++g h ++v  
   Q: 458  KRAWSVDFSRTDpSMLVSGSDDCKVKIWCTNQEASVLNIDM--KANICCVKYNPGSgNYIAVGSADHHIHYYDLrNISRPVHVFSG-HRKAVSY 548
           **********888***************7777777754444..4559*******99******************556899*****9.******* PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............s 265
           ++f sn  el+s+s+d+t++lwd++++  vrt++gh +  + v ++  +e++++gs+ + ++++   ++++ + l+ h+              s
   Q: 549  VKFLSN-DELASASTDSTLRLWDVKENLPVRTFKGHANEKNFVGLTVSSEYIACGSETNEVFVY---HKEISRPLTSHRfgspdmddaedeagS 638
           *****8.6*******************************************************9...88888888888888899********99 PP
   S: 266  svisvavlsfgdnvlvlgsedskvniwk 293
            +is  +++ +++ ++++ + ++++++ 
   Q: 639  YFISAVCWKSDRPTILTANSQGTIKVLV 666
           9999999*****************9975 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEELSAGPLV PAVVKPEPSK GASAAASGGT FPASTSEPDK DFLCPICMQI IKDPFLTACG 60
HSFCYMCIIT HLRNKSDCPC CGDYLTNTNL FPNLLLDKLL KKTSARQISK TASPVEHFRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAAAAGAG GATGAGCCAC TATACCCACA CGCTCTCTCC CTTCTCTCTT TCTCTCTCCA 60
AAACCCCAAT TCCGAAGCAA AAACTACCTT CACATCCACA AACCACACCT CCGCCATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

gmx:100813745

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002460	Amborella trichopoda	74.04	0.00e+00	971.00
IUUC-Ame-011176	Astyanax mexicanus	57.85	3.00e-40	159.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	32.48	7.00e-37	147.00
IUUC-Cme-027350	Cyanidioschyzon merolae	44.35	1.00e-91	331.00
IUUC-Dor-031110	Dipodomys ordii	52.61	7.00e-94	338.00
IUUC-Ete-033016	Echinops telfairi	52.61	1.00e-93	337.00
IUUC-Eeu-034690	Erinaceus europaeus	53.19	5.00e-89	322.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	52.50	3.00e-72	264.00
IUUC-Meu-056595	Macropus eugenii	40.79	3.00e-58	219.00
IUUC-Opr-070366	Ochotona princeps	45.92	2.00e-45	177.00
IUUC-Pca-100846	Procavia capensis	48.85	4.00e-107	382.00
IUUC-Sha-106514	Sarcophilus harrisii	49.05	4.00e-103	367.00
IUUC-Sar-113230	Sorex araneus	43.85	1.00e-70	260.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence