iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110968

Ensembl Protein ID

Solyc01g096110.2.1

UniProt Accession

K4B000; K4B000_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g096110.2	Solyc01g096110.2.1	Solyc01g096110.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-09	37.9	2421	2454

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++svt ++  +   ++ +Gs Dg +k+WD ++ 
   Q: 2421 HAGSVTKISTiPHtSFFFTGSKDGDVKLWDAKSA 2454
           999*****96655589**************7665 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MESHKISCCN IDDDVVSKLP LQMIKSEIIP PAPNRSKSPS EFEPAIDWQP NFAGYSWIAY 60
GASSILVIRQ FPNPLSQTET VVGTVFQQVL ELSIDGTGTV SAVAWSPVTP SSGDLAAALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGTC ACAAAATCAG TTGCTGTAAC ATAGATGACG ACGTCGTCTC GAAGTTACCA 60
CTTCAGATGA TTAAATCGGA GATAATTCCT CCGGCACCGA ACCGATCAAA ATCTCCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

KEGG

sly:101249217

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	56.07	1.00e-51	194.00
IUUC-Aml-001368	Ailuropoda melanoleuca	30.49	7.00e-37	150.00
IUUC-Atr-002754	Amborella trichopoda	59.21	0.00e+00	667.00
IUUC-Apl-003377	Anas platyrhynchos	32.62	7.00e-36	147.00
IUUC-Aca-004649	Anolis carolinensis	38.11	1.00e-37	152.00
IUUC-Aly-006404	Arabidopsis lyrata	44.16	0.00e+00	1866.00
IUUC-Ath-006612	Arabidopsis thaliana	43.99	0.00e+00	1864.00
IUUC-Afu-009077	Aspergillus fumigatus	28.73	6.00e-37	149.00
IUUC-Ani-009437	Aspergillus nidulans	25.98	1.00e-37	151.00
IUUC-Ang-009742	Aspergillus niger	28.89	1.00e-40	161.00
IUUC-Ame-010919	Astyanax mexicanus	32.51	2.00e-39	158.00
IUUC-Bta-013088	Bos taurus	30.85	2.00e-37	152.00
IUUC-Bdi-014471	Brachypodium distachyon	44.23	2.00e-167	582.00
IUUC-Bol-016375	Brassica oleracea	43.98	0.00e+00	1837.00
IUUC-Bra-016630	Brassica rapa	43.97	0.00e+00	1864.00
IUUC-Cel-018537	Caenorhabditis elegans	30.32	2.00e-24	108.00
IUUC-Cja-018770	Callithrix jacchus	31.47	9.00e-37	150.00
IUUC-Cfa-021089	Canis familiaris	31.31	2.00e-36	149.00
IUUC-Cpo-022333	Cavia porcellus	30.25	1.00e-36	149.00
IUUC-Csa-023972	Chlorocebus sabaeus	31.47	1.00e-36	149.00
IUUC-Cho-024762	Choloepus hoffmanni	31.35	6.00e-35	144.00
IUUC-Csv-026055	Ciona savignyi	40.19	5.00e-37	150.00
IUUC-Dre-028673	Danio rerio	30.87	7.00e-36	147.00
IUUC-Dno-029855	Dasypus novemcinctus	33.63	1.00e-27	119.00
IUUC-Dor-030381	Dipodomys ordii	34.78	1.00e-35	146.00
IUUC-Dme-031825	Drosophila melanogaster	33.44	1.00e-37	152.00
IUUC-Ete-033176	Echinops telfairi	31.46	2.00e-35	145.00
IUUC-Eca-033386	Equus caballus	31.98	1.00e-36	149.00
IUUC-Eeu-035011	Erinaceus europaeus	34.98	3.00e-34	141.00
IUUC-Fca-035735	Felis catus	30.68	7.00e-37	150.00
IUUC-Fal-037367	Ficedula albicollis	31.48	6.00e-37	150.00
IUUC-Gmo-038687	Gadus morhua	31.54	4.00e-36	147.00
IUUC-Gga-040693	Gallus gallus	30.89	3.00e-36	147.00
IUUC-Gac-041986	Gasterosteus aculeatus	31.63	5.00e-38	154.00
IUUC-Gma-044099	Glycine max	46.70	0.00e+00	2089.00
IUUC-Ggo-045379	Gorilla gorilla	31.47	2.00e-36	149.00
IUUC-Hsa-046758	Homo sapiens	31.47	1.00e-36	149.00
IUUC-Hvu-047213	Hordeum vulgare	65.32	4.00e-116	410.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	31.73	9.00e-36	146.00
IUUC-Lch-050020	Latimeria chalumnae	32.24	4.00e-37	151.00
IUUC-Lpe-051382	Leersia perrieri	39.19	0.00e+00	1298.00
IUUC-Loc-052909	Lepisosteus oculatus	33.56	5.00e-40	160.00
IUUC-Laf-054195	Loxodonta africana	30.41	4.00e-37	151.00
IUUC-Mcc-055533	Macaca mulatta	31.22	2.00e-36	149.00
IUUC-Meu-056627	Macropus eugenii	28.53	1.00e-24	109.00
IUUC-Mtr-058725	Medicago truncatula	46.30	0.00e+00	2107.00
IUUC-Mga-059386	Meleagris gallopavo	34.28	2.00e-35	145.00
IUUC-Mmr-061082	Microcebus murinus	31.47	4.00e-36	147.00
IUUC-Mdo-062837	Monodelphis domestica	31.88	6.00e-33	137.00
IUUC-Mmu-063808	Mus musculus	31.59	3.00e-40	161.00
IUUC-Mac-065224	Musa acuminata	45.48	0.00e+00	1179.00
IUUC-Mpu-066054	Mustela putorius furo	31.54	7.00e-36	147.00
IUUC-Mlu-068235	Myotis lucifugus	30.73	2.00e-35	145.00
IUUC-Nfi-068420	Neosartorya fischeri	27.68	9.00e-37	149.00
IUUC-Nle-069401	Nomascus leucogenys	31.47	2.00e-36	149.00
IUUC-Opr-070543	Ochotona princeps	25.55	4.00e-20	94.70
IUUC-Ont-071658	Oreochromis niloticus	35.57	1.00e-36	149.00
IUUC-Oan-072796	Ornithorhynchus anatinus	28.00	1.00e-14	72.00
IUUC-Ocu-074048	Oryctolagus cuniculus	31.68	1.00e-36	149.00
IUUC-Oba-075826	Oryza barthii	38.47	0.00e+00	1516.00
IUUC-Obr-076145	Oryza brachyantha	38.31	0.00e+00	1495.00
IUUC-Ogu-078307	Oryza glumaepatula	38.58	0.00e+00	1532.00
IUUC-Oin-080118	Oryza indica	37.23	0.00e+00	903.00
IUUC-Olo-080848	Oryza longistaminata	41.08	5.00e-170	592.00
IUUC-Oni-082792	Oryza nivara	40.72	0.00e+00	1227.00
IUUC-Opu-084153	Oryza punctata	39.50	0.00e+00	1250.00
IUUC-Oru-084415	Oryza rufipogon	39.72	0.00e+00	1192.00
IUUC-Osa-085332	Oryza sativa	55.24	3.00e-177	614.00
IUUC-Ola-086945	Oryzias latipes	31.11	4.00e-36	147.00
IUUC-Oga-088816	Otolemur garnettii	30.96	1.00e-37	152.00
IUUC-Oar-089618	Ovis aries	31.13	1.00e-37	152.00
IUUC-Ptr-091058	Pan troglodytes	31.47	1.00e-36	149.00
IUUC-Pan-091912	Papio anubis	31.47	1.00e-36	149.00
IUUC-Psi-093590	Pelodiscus sinensis	34.98	3.00e-38	154.00
IUUC-Ppa-095505	Physcomitrella patens	28.34	5.00e-153	536.00
IUUC-Pfo-097445	Poecilia formosa	30.77	2.00e-39	159.00
IUUC-Pab-098507	Pongo abelii	31.47	1.00e-36	149.00
IUUC-Pop-098812	Populus trichocarpa	50.68	0.00e+00	1430.00
IUUC-Pca-101008	Procavia capensis	34.78	7.00e-35	143.00
IUUC-Ppe-101610	Prunus persica	50.28	0.00e+00	2330.00
IUUC-Pva-102348	Pteropus vampyrus	28.92	1.00e-36	149.00
IUUC-Rno-105076	Rattus norvegicus	31.23	8.00e-38	153.00
IUUC-Sha-106955	Sarcophilus harrisii	32.08	6.00e-37	150.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	32.84	6.00e-23	102.00
IUUC-Smo-109573	Selaginella moellendorffii	55.16	2.00e-129	454.00
IUUC-Sit-109981	Setaria italica	42.62	0.00e+00	805.00
IUUC-Stu-111939	Solanum tuberosum	98.34	1.00e-109	387.00
IUUC-Sar-113751	Sorex araneus	30.48	1.00e-22	103.00
IUUC-Sbi-113768	Sorghum bicolor	64.25	4.00e-66	242.00
IUUC-Ssc-116371	Sus scrofa	30.25	1.00e-38	156.00
IUUC-Tgu-117271	Taeniopygia guttata	33.92	6.00e-35	144.00
IUUC-Tru-117628	Takifugu rubripes	31.78	3.00e-39	157.00
IUUC-Tsy-119228	Tarsius syrichta	30.97	5.00e-35	144.00
IUUC-Tni-120709	Tetraodon nigroviridis	32.28	6.00e-39	157.00
IUUC-Tca-121789	Theobroma cacao	48.76	0.00e+00	2032.00
IUUC-Tae-125726	Triticum aestivum	38.74	0.00e+00	1525.00
IUUC-Tur-126437	Triticum urartu	38.98	1.00e-58	220.00
IUUC-Tbe-127760	Tupaia belangeri	31.20	2.00e-38	155.00
IUUC-Ttr-128991	Tursiops truncatus	31.30	2.00e-37	152.00
IUUC-Vpa-130309	Vicugna pacos	31.40	9.00e-37	150.00
IUUC-Vvi-131584	Vitis vinifera	52.68	0.00e+00	884.00
IUUC-Xtr-132638	Xenopus tropicalis	31.05	7.00e-36	147.00
IUUC-Xma-134109	Xiphophorus maculatus	31.75	3.00e-40	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence