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Tag Content
iUUCD ID IUUC-Bra-017045
Ensembl Protein ID Bra009770.1-P
UniProt Accession A5HB99; A5HB99_BRARP
Genbank Protein ID ABQ10570.1; ABQ10571.1
Protein Name WD-like protein
Genbank Nucleotide ID EF434562; EF434563
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra009770 Bra009770.1 Bra009770.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-16 60.9 170 201
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
    H +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 170 HDKEVHDIAWGEaRVFASVSADGSVRIFDLRD 201
    8899******55689**************987 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MDNSAPDSLP RSETAVTYDS PYPLYAMSFS SSTHRIAVGS FLEDYNNRID ILSFDSDSMS 60
LKPLPSLSFE HPYPPTKLMF SPPSLRRSGG GDLLASSGDF LRLWEVNEDS SSAEPVSVLN 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017045|E3,WD_repeat|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGACAACT CAGCTCCGGA CTCCTTACCT AGATCGGAAA CCGCCGTCAC CTACGACTCT 60
CCTTACCCCC TCTACGCGAT GTCCTTCTCC TCCTCCACCC ACCGAATCGC CGTCGGGAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017045|E3,WD_repeat|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000420 Aegilops tauschii 64.55 4.00e-37 145.00
IUUC-Aly-006211 Arabidopsis lyrata 92.38 0.00e+00 649.00
IUUC-Ath-006884 Arabidopsis thaliana 92.96 0.00e+00 654.00
IUUC-Ago-007732 Ashbya gossypii 30.65 8.00e-39 154.00
IUUC-Acl-008299 Aspergillus clavatus 36.87 1.00e-44 174.00
IUUC-Afl-008470 Aspergillus flavus 35.41 1.00e-40 160.00
IUUC-Afu-008896 Aspergillus fumigatus 34.56 9.00e-41 161.00
IUUC-Ani-009375 Aspergillus nidulans 34.42 7.00e-42 164.00
IUUC-Ang-009687 Aspergillus niger 35.38 8.00e-47 181.00
IUUC-Aor-010198 Aspergillus oryzae 34.92 3.00e-40 159.00
IUUC-Ate-010363 Aspergillus terreus 35.83 5.00e-38 152.00
IUUC-Bgr-012055 Blumeria graminis 35.85 3.00e-45 176.00
IUUC-Bci-013840 Botrytis cinerea 36.61 9.00e-49 187.00
IUUC-Bdi-014944 Brachypodium distachyon 63.16 3.00e-123 434.00
IUUC-Bol-015620 Brassica oleracea 99.41 0.00e+00 650.00
IUUC-Cgl-026588 Colletotrichum gloeosporioides 39.27 3.00e-48 186.00
IUUC-Cne-026871 Cryptococcus neoformans 31.73 1.00e-46 180.00
IUUC-Cme-027345 Cyanidioschyzon merolae 37.65 2.00e-53 202.00
IUUC-Dse-031207 Dothistroma septosporum 36.52 6.00e-40 158.00
IUUC-Fox-037852 Fusarium oxysporum 37.53 5.00e-52 198.00
IUUC-Fso-038173 Fusarium solani 35.82 4.00e-51 195.00
IUUC-Ggr-040072 Gaeumannomyces graminis 36.50 8.00e-49 187.00
IUUC-Gma-043012 Glycine max 76.63 2.00e-154 538.00
IUUC-Hvu-047639 Hordeum vulgare 64.58 9.00e-121 426.00
IUUC-Kpa-049347 Komagataella pastoris 32.13 7.00e-45 174.00
IUUC-Lpe-051336 Leersia perrieri 63.88 1.00e-121 429.00
IUUC-Lma-053005 Leptosphaeria maculans 39.05 6.00e-44 172.00
IUUC-Meu-056685 Macropus eugenii 45.40 7.00e-67 246.00
IUUC-Mor-057075 Magnaporthe oryzae 35.86 1.00e-43 170.00
IUUC-Mpo-057336 Magnaporthe poae 36.07 4.00e-48 185.00
IUUC-Mtr-058793 Medicago truncatula 78.55 6.00e-158 549.00
IUUC-Mvi-060379 Microbotryum violaceum 37.72 1.00e-40 160.00
IUUC-Mac-065344 Musa acuminata 59.48 9.00e-111 392.00
IUUC-Nfi-068302 Neosartorya fischeri 34.09 3.00e-43 169.00
IUUC-Ncr-068642 Neurospora crassa 36.00 4.00e-49 189.00
IUUC-Oba-075455 Oryza barthii 60.96 1.00e-113 402.00
IUUC-Obr-076064 Oryza brachyantha 63.31 1.00e-116 412.00
IUUC-Ogl-077224 Oryza glaberrima 60.96 1.00e-113 402.00
IUUC-Ogu-078639 Oryza glumaepatula 60.66 9.00e-113 399.00
IUUC-Oin-080194 Oryza indica 60.96 1.00e-113 402.00
IUUC-Olo-080234 Oryza longistaminata 60.66 3.00e-113 400.00
IUUC-Oni-082021 Oryza nivara 60.96 1.00e-113 402.00
IUUC-Opu-083903 Oryza punctata 60.30 2.00e-113 402.00
IUUC-Oru-084738 Oryza rufipogon 60.96 1.00e-113 402.00
IUUC-Osa-085445 Oryza sativa 60.96 1.00e-113 402.00
IUUC-Pno-094967 Phaeosphaeria nodorum 39.07 5.00e-44 172.00
IUUC-Pop-099260 Populus trichocarpa 79.88 1.00e-162 565.00
IUUC-Ppe-101664 Prunus persica 78.78 2.00e-162 564.00
IUUC-Pte-104094 Pyrenophora teres 39.53 6.00e-44 172.00
IUUC-Pyt-104726 Pyrenophora triticirepentis 39.53 1.00e-43 171.00
IUUC-Sce-106252 Saccharomyces cerevisiae 31.97 2.00e-44 172.00
IUUC-Spo-108014 Schizosaccharomyces pombe 36.99 3.00e-48 185.00
IUUC-Ssl-108466 Sclerotinia sclerotiorum 35.63 2.00e-48 187.00
IUUC-Sly-111838 Solanum lycopersicum 75.58 2.00e-157 547.00
IUUC-Stu-112456 Solanum tuberosum 75.58 5.00e-157 546.00
IUUC-Sar-113705 Sorex araneus 44.48 3.00e-67 248.00
IUUC-Sbi-113984 Sorghum bicolor 63.48 1.00e-102 365.00
IUUC-Sre-114968 Sporisorium reilianum 38.50 3.00e-53 202.00
IUUC-Tca-121493 Theobroma cacao 77.39 5.00e-153 533.00
IUUC-Tre-121987 Trichoderma reesei 37.82 4.00e-51 195.00
IUUC-Tvi-122586 Trichoderma virens 36.76 3.00e-51 196.00
IUUC-Tae-125936 Triticum aestivum 64.88 3.00e-121 427.00
IUUC-Tme-126973 Tuber melanosporum 38.27 2.00e-42 167.00
IUUC-Uma-129362 Ustilago maydis 39.04 7.00e-54 204.00
IUUC-Vda-130025 Verticillium dahliae 38.86 8.00e-49 187.00
IUUC-Vvi-131483 Vitis vinifera 76.25 3.00e-154 536.00
IUUC-Yli-134419 Yarrowia lipolytica 40.06 2.00e-58 219.00
IUUC-Zma-135276 Zea mays 63.28 2.00e-119 421.00
Created Date 25-Jun-2017

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