iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057950

Ensembl Protein ID

KEH31690

UniProt Accession

A0A072V0M7; A0A072V0M7_MEDTR

Genbank Protein ID

KEH31690.1

Protein Name

Pre-mRNA splicing factor

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g102520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g102520	KEH31690	KEH31690

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-26	92.2	336	372
UBD/Beta-Prp	6.30e-44	151.8	284	498

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++s+++D++ik WD+ tg +
   Q: 336  GHSKAVRDICFtNDgTKFLSAGYDKNIKYWDTETGQV 372
           8***********999*****************99976 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           + l+++ sgh+++v+a++f p++  ++++++ D  +k+wd+ +tgkc++t+ gh++ v+++ f  +g k++s++ d+ i+ wd+etgq+++++ +g+   v
   Q: 284  KRLVHTWSGHTKGVSAIRFFPNSGhLILSAGMDTKVKIWDVfNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETGQVISTFSTGKIPYV 384
           56677777777777777776665557777777777777764257777777777777777777777777777777777777777777777777777777777 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnderlvs 239
             ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   + h   + s+ ++pn ++l+ 
   Q: 385  VKLNPDEDKqNVLLAGMSDKKIVQWDMNTGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEpHMHSMPSISLHPNANWLAA 484
           77777777777777777777777777777777777776.77777777777777777777777777777777665554444447777777777777777777 PP
   S: 240  gssDgsiriWdlrs 253
            s D++i i+ +r 
   Q: 485  QSLDNQILIYSTRE 498
           77777777775444 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDLLNQYSDN NNSDPGSPTQ NPNSPENSPT RLLPSRSAAP KVDDTMLALT VADPKTLSKP 60
IDPTQHLVAF NPTYDQLWAP IQGPSHPYAK DGLAQGMRNH KLGFVEDANI EPFLFDEQHN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTAC TCAACCAATA CTCCGACAAC AACAACAGCG ATCCAGGTTC ACCAACTCAA 60
AACCCTAATT CACCGGAAAA TTCTCCAACC CGTCTCCTCC CATCCCGTTC TGCCGCCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

mtr:MTR_4g102520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	72.78	0.00e+00	800.00
IUUC-Atr-002502	Amborella trichopoda	76.30	0.00e+00	897.00
IUUC-Apl-003885	Anas platyrhynchos	49.54	2.00e-150	525.00
IUUC-Aca-004854	Anolis carolinensis	34.68	8.00e-87	313.00
IUUC-Aly-006158	Arabidopsis lyrata	79.72	0.00e+00	895.00
IUUC-Ath-007474	Arabidopsis thaliana	78.92	0.00e+00	877.00
IUUC-Ago-007726	Ashbya gossypii	39.71	6.00e-72	264.00
IUUC-Acl-008220	Aspergillus clavatus	39.93	4.00e-118	417.00
IUUC-Afl-008473	Aspergillus flavus	39.12	1.00e-116	413.00
IUUC-Afu-008773	Aspergillus fumigatus	41.33	2.00e-120	425.00
IUUC-Ang-009851	Aspergillus niger	38.39	1.00e-117	416.00
IUUC-Aor-009950	Aspergillus oryzae	39.12	1.00e-116	413.00
IUUC-Ate-010372	Aspergillus terreus	38.82	9.00e-119	419.00
IUUC-Ame-011660	Astyanax mexicanus	49.07	3.00e-150	524.00
IUUC-Bgr-012230	Blumeria graminis	40.41	2.00e-110	392.00
IUUC-Bta-012568	Bos taurus	49.63	7.00e-151	526.00
IUUC-Bci-013646	Botrytis cinerea	54.08	1.00e-110	392.00
IUUC-Bdi-014199	Brachypodium distachyon	72.03	0.00e+00	801.00
IUUC-Bol-015695	Brassica oleracea	78.20	0.00e+00	897.00
IUUC-Bra-017923	Brassica rapa	76.58	0.00e+00	927.00
IUUC-Cel-018535	Caenorhabditis elegans	38.77	7.00e-123	433.00
IUUC-Cja-019071	Callithrix jacchus	47.83	1.00e-150	526.00
IUUC-Cfa-020559	Canis familiaris	49.63	1.00e-150	526.00
IUUC-Cpo-022356	Cavia porcellus	49.44	8.00e-151	526.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	49.40	7.00e-93	332.00
IUUC-Csa-023125	Chlorocebus sabaeus	47.83	6.00e-151	526.00
IUUC-Cho-024676	Choloepus hoffmanni	47.78	6.00e-140	490.00
IUUC-Cin-025229	Ciona intestinalis	49.34	3.00e-147	514.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	47.14	2.00e-95	342.00
IUUC-Cne-026885	Cryptococcus neoformans	60.70	3.00e-129	454.00
IUUC-Dre-027631	Danio rerio	49.26	2.00e-153	535.00
IUUC-Dno-029815	Dasypus novemcinctus	45.73	6.00e-142	497.00
IUUC-Dor-031143	Dipodomys ordii	61.49	6.00e-129	453.00
IUUC-Dse-031520	Dothistroma septosporum	48.37	6.00e-100	357.00
IUUC-Dme-032050	Drosophila melanogaster	44.56	5.00e-145	507.00
IUUC-Ete-032866	Echinops telfairi	46.99	1.00e-144	506.00
IUUC-Eca-033384	Equus caballus	47.41	4.00e-149	521.00
IUUC-Eeu-034471	Erinaceus europaeus	39.31	5.00e-102	364.00
IUUC-Fca-035727	Felis catus	47.83	3.00e-151	527.00
IUUC-Fal-036774	Ficedula albicollis	50.74	9.00e-155	539.00
IUUC-Fox-037951	Fusarium oxysporum	51.43	7.00e-110	390.00
IUUC-Fso-038287	Fusarium solani	53.10	8.00e-109	386.00
IUUC-Gmo-039670	Gadus morhua	48.60	9.00e-156	543.00
IUUC-Ggr-039764	Gaeumannomyces graminis	48.69	1.00e-102	366.00
IUUC-Gga-040293	Gallus gallus	49.63	7.00e-153	533.00
IUUC-Gac-042159	Gasterosteus aculeatus	47.37	2.00e-152	532.00
IUUC-Gma-044299	Glycine max	86.70	0.00e+00	890.00
IUUC-Ggo-044864	Gorilla gorilla	49.63	9.00e-151	526.00
IUUC-Hsa-046602	Homo sapiens	49.63	9.00e-151	526.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	62.65	1.00e-134	471.00
IUUC-Kpa-049318	Komagataella pastoris	46.71	1.00e-90	326.00
IUUC-Lch-049796	Latimeria chalumnae	43.04	1.00e-120	426.00
IUUC-Lpe-051153	Leersia perrieri	73.30	0.00e+00	816.00
IUUC-Loc-052467	Lepisosteus oculatus	48.98	6.00e-153	533.00
IUUC-Lma-053107	Leptosphaeria maculans	50.87	3.00e-107	381.00
IUUC-Laf-053787	Loxodonta africana	47.83	5.00e-152	530.00
IUUC-Mcc-055706	Macaca mulatta	47.59	5.00e-151	527.00
IUUC-Meu-056757	Macropus eugenii	59.40	4.00e-117	414.00
IUUC-Mor-057079	Magnaporthe oryzae	49.57	4.00e-105	374.00
IUUC-Mpo-057533	Magnaporthe poae	48.86	3.00e-103	367.00
IUUC-Mla-058910	Melampsora laricipopulina	46.18	1.00e-139	489.00
IUUC-Mga-059366	Meleagris gallopavo	49.63	2.00e-152	531.00
IUUC-Mvi-060349	Microbotryum violaceum	43.54	2.00e-132	466.00
IUUC-Mmr-061209	Microcebus murinus	47.94	2.00e-153	535.00
IUUC-Mdo-062118	Monodelphis domestica	48.69	1.00e-154	539.00
IUUC-Mmu-063173	Mus musculus	49.63	7.00e-151	526.00
IUUC-Mac-065080	Musa acuminata	75.89	0.00e+00	850.00
IUUC-Mpu-066659	Mustela putorius furo	49.63	6.00e-151	526.00
IUUC-Mlu-067029	Myotis lucifugus	49.72	6.00e-151	526.00
IUUC-Nfi-068334	Neosartorya fischeri	41.70	5.00e-122	431.00
IUUC-Ncr-068675	Neurospora crassa	47.46	6.00e-91	327.00
IUUC-Nle-070113	Nomascus leucogenys	49.63	7.00e-151	526.00
IUUC-Opr-070685	Ochotona princeps	46.37	6.00e-148	516.00
IUUC-Ont-071680	Oreochromis niloticus	49.26	2.00e-153	535.00
IUUC-Oan-073573	Ornithorhynchus anatinus	48.92	4.00e-139	487.00
IUUC-Ocu-074074	Oryctolagus cuniculus	47.94	8.00e-153	533.00
IUUC-Oba-075625	Oryza barthii	73.00	0.00e+00	824.00
IUUC-Obr-076510	Oryza brachyantha	70.77	0.00e+00	821.00
IUUC-Ogl-077275	Oryza glaberrima	73.00	0.00e+00	824.00
IUUC-Ogu-078563	Oryza glumaepatula	73.00	0.00e+00	824.00
IUUC-Oin-079898	Oryza indica	81.91	0.00e+00	682.00
IUUC-Olo-081080	Oryza longistaminata	72.33	0.00e+00	741.00
IUUC-Oni-083121	Oryza nivara	73.00	0.00e+00	825.00
IUUC-Opu-083329	Oryza punctata	73.48	0.00e+00	821.00
IUUC-Osa-086039	Oryza sativa	73.00	0.00e+00	824.00
IUUC-Ola-087149	Oryzias latipes	50.00	2.00e-155	541.00
IUUC-Olu-087627	Ostreococcus lucimarinus	48.39	1.00e-142	498.00
IUUC-Oga-088359	Otolemur garnettii	48.23	8.00e-151	526.00
IUUC-Oar-089390	Ovis aries	49.63	1.00e-150	525.00
IUUC-Ptr-090894	Pan troglodytes	49.63	9.00e-151	526.00
IUUC-Pan-092476	Papio anubis	47.59	5.00e-151	527.00
IUUC-Psi-093527	Pelodiscus sinensis	48.72	2.00e-139	488.00
IUUC-Pno-094771	Phaeosphaeria nodorum	49.29	6.00e-106	377.00
IUUC-Ppa-095386	Physcomitrella patens	70.15	0.00e+00	848.00
IUUC-Pfo-096139	Poecilia formosa	46.53	9.00e-152	529.00
IUUC-Pop-099962	Populus trichocarpa	85.56	0.00e+00	941.00
IUUC-Pca-100876	Procavia capensis	41.71	5.00e-123	434.00
IUUC-Ppe-101777	Prunus persica	85.13	0.00e+00	923.00
IUUC-Pva-102418	Pteropus vampyrus	47.83	5.00e-151	526.00
IUUC-Pgr-103456	Puccinia graminis	50.28	9.00e-148	516.00
IUUC-Ptt-103731	Puccinia triticina	48.11	2.00e-135	475.00
IUUC-Pte-104386	Pyrenophora teres	48.77	1.00e-104	372.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	48.90	5.00e-104	370.00
IUUC-Rno-105694	Rattus norvegicus	46.21	2.00e-142	498.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.43	8.00e-75	273.00
IUUC-Sha-106709	Sarcophilus harrisii	47.81	8.00e-152	529.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	38.56	9.00e-111	393.00
IUUC-Spo-108331	Schizosaccharomyces pombe	37.04	1.00e-103	370.00
IUUC-Smo-108778	Selaginella moellendorffii	60.63	0.00e+00	662.00
IUUC-Sit-110446	Setaria italica	74.23	0.00e+00	810.00
IUUC-Sly-111330	Solanum lycopersicum	81.47	0.00e+00	895.00
IUUC-Stu-112610	Solanum tuberosum	78.50	0.00e+00	900.00
IUUC-Sbi-114005	Sorghum bicolor	73.36	0.00e+00	785.00
IUUC-Sre-114988	Sporisorium reilianum	46.49	2.00e-136	478.00
IUUC-Ssc-115760	Sus scrofa	47.83	5.00e-151	527.00
IUUC-Tgu-116493	Taeniopygia guttata	51.11	5.00e-157	546.00
IUUC-Tru-118489	Takifugu rubripes	48.09	3.00e-153	534.00
IUUC-Tsy-119332	Tarsius syrichta	48.35	1.00e-153	535.00
IUUC-Tni-120202	Tetraodon nigroviridis	48.24	8.00e-146	509.00
IUUC-Tca-121429	Theobroma cacao	83.59	0.00e+00	947.00
IUUC-Tre-122162	Trichoderma reesei	54.65	3.00e-113	401.00
IUUC-Tvi-122500	Trichoderma virens	54.65	3.00e-113	401.00
IUUC-Tae-125557	Triticum aestivum	72.46	0.00e+00	808.00
IUUC-Tur-126554	Triticum urartu	72.41	0.00e+00	805.00
IUUC-Tme-126919	Tuber melanosporum	41.79	7.00e-128	450.00
IUUC-Tbe-127968	Tupaia belangeri	45.23	9.00e-138	483.00
IUUC-Ttr-129215	Tursiops truncatus	49.44	1.00e-148	519.00
IUUC-Uma-129622	Ustilago maydis	45.28	9.00e-139	486.00
IUUC-Vda-129750	Verticillium dahliae	52.42	7.00e-110	390.00
IUUC-Vpa-130617	Vicugna pacos	49.63	4.00e-145	507.00
IUUC-Vvi-131238	Vitis vinifera	81.28	0.00e+00	920.00
IUUC-Xtr-131865	Xenopus tropicalis	47.10	7.00e-151	526.00
IUUC-Xma-133627	Xiphophorus maculatus	46.27	5.00e-152	530.00
IUUC-Yli-134390	Yarrowia lipolytica	51.16	4.00e-105	374.00
IUUC-Zma-135925	Zea mays	73.56	0.00e+00	788.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence